ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX12813813 | MCF-7
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX10976388: 293

◢ SRX10976389: 293

◢ SRX150671: 293

◢ SRX16676305: 293

◢ SRX16676306: 293

◢ SRX17826856: 293

◢ SRX17826857: 293

◢ SRX17826858: 293

◢ SRX17826859: 293

◢ SRX17826860: 293

◢ SRX17826861: 293

◢ SRX22117740: 293

◢ SRX22117741: 293

◢ SRX22117742: 293

◢ SRX22117743: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX1799522: CD4+ T cells

◢ SRX1799525: CD4+ T cells

◢ SRX1799528: CD4+ T cells

◢ SRX1799531: CD4+ T cells

◢ SRX671999: ES cells

◢ SRX672001: ES cells

◢ SRX672002: ES cells

◢ SRX9823127: GM12878

◢ SRX9823128: GM12878

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX11220464: HT-29

◢ SRX11220465: HT-29

◢ SRX11220466: HT-29

◢ SRX9977682: HUVEC

◢ SRX1925740: iPSC derived neural cells

◢ DRX402530: K-562

◢ DRX402531: K-562

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX5457586: K-562

◢ SRX5457587: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◣ SRX12813813: MCF-7

◢ SRX12813814: MCF-7

◢ SRX1497516: MCF-7

◢ SRX7030916: MCF-7

◢ SRX7030917: MCF-7

◢ SRX7030918: MCF-7

◢ SRX7030919: MCF-7

◢ DRX402534: MYL

◢ DRX402535: MYL

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

FRG2C
FRG2
DUX4
COL23A1
RNF169
KRBA1
SMCO1
PCNP
MTRNR2L1
KCNJ15
THEM4
GCNT7
FAM209A
CCDC200
RPL10L
DSE
TSPYL4
RPS14
UBB
GAPDH
OSGIN1
RPS27A
CLHC1
RPL30
CYBRD1
RPL26
TPTEP2-CSNK1E
TUBA1B
MON2
MTRNR2L2
MSH3
DHFR
MYL6
GSTM5
SCCPDH
CNOT3
PARL
ZFP37
IL21R
ANP32D
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
DNAJB14
H2AZ1
SEC23B
RACK1
PRRT1B
C3orf14
RUNDC3B
ZNF783
LEP
USP17L20
USP17L22
ST20-MTHFS
IL36A
GSTM1
RPL21
ACAA2
UBE2F
ST6GALNAC6
KMT2A
NKIRAS1
RPL15
ARHGAP39
ATP5F1B
TATDN2
DEGS2
IGFALS
SERHL2
TUBA1A
PNPLA7
PSMD6
FAM184A
CEP41
CYP4F8
TXNRD2
TTLL12
PDCD7
FAM153B
MYO5A
STMN3
RTEL1
BMP7
FAM227B
DTWD1
SYPL1
KRTAP10-9
PLCG1
TPT1
EPS8
STX16
PUS7
EFCAB10
PARP15
GTF2IRD2B
PDE11A
TARS3
MUC12
LONRF2
TMEM229B
BANP
ANKRD54
EIF3L
HEATR6
C2orf88
SATB1
TNS2
PPP1R9A
HSPA8
ZNF572
ACOX3
TRMT44
ZNF641
DVL3
FZD1
ARFGEF2
DMXL2
ZNF324B
KAT6B
CUL1
SKP2
LMBRD2
SCGB1C1
ZNF217
SDR42E1
FAM217B
SYCP2
PPP1R3E
BCL2L2-PABPN1
BCL2L2
ZFP1
MAN1A2
LRP12
AFG3L2
TNFRSF11A
SLC27A5
EIF5A2
PPM1D
CERS2
CADPS
SFTA2
MAD1L1
APOL4
GAS2L3
ACSF3
PRELID3B
ATXN7
HMGB1
ZNF317
INTS2
NEDD9
EFCAB13
IRAK2
CCDC130
THOC3
H3-3B
DPY19L4
BFSP1
PLD4
GRM4
ELOVL2
IL36RN
IL36B
TMEM65
SLC7A5
OR2AP1
ZNF282
TCTN3
CLDN18
CD14
XXYLT1
PFDN4
RANBP17
LYSMD2
CRY1
PAXIP1
ACAP2
SLC26A4
TRIM37
BCAR1
CLK4
SNCG
MMRN2
SLC25A48
ITPK1
C20orf204
MAPK6
RBPJ
HEATR4
FBXL5
PLEKHA1
SFT2D3
PTPA
CRAT
HYAL1
TBX2
PDE8A
BAIAP2L1
ATXN7L1
CCDC74A
RASL11B
ATP1A1
IMPA2
PARP16
FBXL18
STPG4
DSTYK
RSRC1
SHOX2
MYBPC3
KRTDAP
HOMER1
RABL6
CCNY
USP36
SESN1
CEP57L1
RPL26L1
SRI
YPEL3
AADACL4
BSDC1
MTRNR2L8
MBOAT4
TMEM89
EXTL2
ZNF562
GTPBP6
DUSP6
ITGB3BP
EFCAB7
GBA
DBNDD2
GORASP2
CTAG1B
CTAG1A
SARS2
MRPS12
RABGAP1
FEM1C
CBX1
COL18A1
APOA1
TBX6
NUF2
APOBEC3B
PAXBP1
MTF2
RBBP5
BCR
RPS7
ZNF761
BCAR3
SSBP1
DMAP1
AURKAIP1
TLR2
SUMO3
SAMD4B
LUC7L2
FMC1-LUC7L2
FMC1
OR4K17
SF3A3
PRSS38
PUM1
ACYP2
RFC1
GPRC5C
FAAH
NDUFS7
MED23
CEP85
SLC1A7
BAAT
NME1-NME2
NME1
COX16
ADCY10
DCP1A
RPS29
PEX3
ADAT2
YWHAQ
ZNF117
SEM1
TMEM41A
ZNF623
INTS12
GSTCD
RAB37
TMEM242
EIF2D
CALCB
RPL27
SULT1C3
CEP72
PPIG
JMJD1C
RABGAP1L
RBM33
ZMPSTE24
PLEC
ZNFX1
IFT88
NDUFB3
FAM126B
TMEM70
ELOC
FRA10AC1
MRPL44
ZNF577
GPD1L
NOS3
GDPGP1
CIB1
TTC32
POLE4
MROH7
C19orf18
CYP17A1
DCAF10
NARF
CALD1
NPAS4
TBC1D19
HERPUD2
MAPRE2
SELENOH
ZNF426
USPL1
TMEM14C
GTF2H2C_2
ZFP30
TMEM43
CHCHD4
CFHR4
TRIP4
GTF2H2
SLC24A1
INTS14
POLR2J3
STX18
GTF2H2C
ENG
RPL37
TOP3B
DRG2
GALNT1
DNAJC25-GNG10
DNAJC25
PAFAH2
COMMD2
ADI1
SLC33A1
ZSCAN31
ZNF561
POLR3B
CYBC1
TOR1AIP2
TOR1AIP1
TMEM62
RBBP9
NME4
KDM3A
ZNF792
LMLN2
TFPT
PRPF31
RERE
ZNF408
ARHGAP1
GSTA4
CAT
MRPS31
TATDN3
NSL1
SMARCD2
YTHDC2
UTP3
CLDN16
PPIP5K2
LIPA
GIN1
CCDC59
ZNF134
PSEN1
ALG10B
PIK3R1
NSFL1C
IPO4
RAD54L2
SLC44A1
FRG1
DNAJB12
SLC25A51
TIGD2
GTF3C3
REEP3
TDP2
ACOT13
EIF3F
TMEM68
TGS1
THAP11
NUTF2
VTA1
NMBR
SUPT7L
SLC4A1AP
RPL11
GTF2H4
LSG1
INTS5
AUH
YJU2
CENPT
MRPL40
HIRA
RTTN
BAIAP2
ACTL8
FBXO31
ZNF32
AP3S2
YY1AP1
DAP3
SMG8
STAT3
CATIP
REXO4
ADAMTS13
GLO1
ZNF341
MSRA
BMS1
CDK5RAP1
MMACHC
CCDC163
WDR36
TMEM44
PPP6R1
HTR5A
KDM1A
GCNT3
ITGA4
TEFM
LCN8
SNIP1
DNALI1
THOC5
CAMK1D
FGD3
INO80C
RNF187
DRAP1
C11orf68
EIF1AD
BANF1
SNAP47
TACO1
ZNF841
ESR2
PRIM2
ORC4
MBD5
REN
ZNF829
ZNF568
PPP1R11
GINS1
ZBTB45
SCAND1
COPS7B
DEK
SUPT6H
SDF2
MRPL21
IGHMBP2
SCARF1
SCMH1
JMJD4
WDR74
PSMF1
KANSL3
FER1L5
SLC2A7
ILF2
SLC41A3
ATP5MC2
USP30
LARP1
SGCE
PEG10
SNX17
EIF2B4
FAM207A
TTC26
TRUB2
COQ4
POLR3E
TMEM222
RILP
HSD17B6
NEMF
WDR11
SAR1B
CCSER2
SLC29A2
DUS1L
FAM133B
FGFBP3
CCDC97
ATR
ZNF571
ZNF540
NBN
ZNF391
SPAAR
RMND1
ARMT1
TSEN15
C1orf167
AKAP10
MTIF2
GALK2
MOB4
MRPL1
BNIP1
DPP9
C17orf75
IST1
WDR43
METTL8
DCAF17
GTPBP3
ANO8
LGR5
MRPS18C
HELQ
CD47
SMIM31
MMP7
KLHL20
ATP9B
C1GALT1C1L
ZBTB40
ZNF226
TUT1
DUSP16
GABPB2
ARID1A
TMEM79
SMG5
COPS4
SCNM1
LYSMD1
NOTCH2NLC
NFE2L3
CANT1
HSPE1-MOB4
HSPE1
HSPD1
MRPS23
SAMD4A
NCOA7
GASK1A
TEX46
TTI2
NSA2
GFM2
OTUD7A
CCNC
DDX18
WDR55
C16orf54
ANXA2
COLEC11
TMX2
MED19
OAZ3
CFAP298-TCP10L
CFAP298
ATF7IP
MRPL48
CTNNB1
RUVBL1
KIAA1549
NRBP2
ZNF566
FASTKD1
GTF3C5
SNRPB
NDUFAF1
HACL1
BTD
POLG
ZSCAN25
CPPED1
RAB30
MLEC
EXO5
CASP4
LZTR1
RTCA
SEC13
STAU1
CLTB
MNAT1
PIN4
NUP54
MAN2C1
MITD1
C8orf37
TTC4
TPR
ODR4
AFAP1L1
ZNF609
LSS
NR1H3
ACP2
FBXL12
SLC45A4
ZCCHC4
ANK3
CLDN4
INPP5F
TMEM101
H4C8
RMDN2
CCNI
SERPINB1
OPA1
NDUFS3
KBTBD4
PCP4L1
RPS20
ADPRS
ADNP
KLRD1
PDE6D
CCAR2
C8orf58
MTBP
MRPL13
CHD1L
GOLGA5
B4GALT7
TLNRD1
PRPF18
GMPS
COX7A2
SUGCT
MPLKIP
TEKT2
NOP16
HIGD2A
C18orf21
TMBIM4
PSRC1
EPRS1
GRPEL2
TPM1
SLTM
BRF2
GPAM
FAM228B
FABP6
BRWD1
CCDC150
MED18
SNRPD1
RNASET2
REM1
DEFB124
TIPARP
SLC35E2A
DCLRE1B
AP4B1
IAH1
TSFM
DGKZ
ING2
SDHAF3
NAA20
PARP2
METTL9
SRSF7
ALKBH3
SLC35A3
LOC102724265
SF3B6
PIGW
MYO19
SLC39A13
CRKL
HNRNPD
TRIM38
ADRM1
PHIP
MATK
ZNF398
CASC3
KRTAP10-8
ZNF772
CCNT1
COPS2
SLC38A9
HUS1
ADAR
RANBP1
UBLCP1
EIF3E
ZNF292
TPK1
MRPL34
TIMM22
PSMD3
POLR1H
NCBP3
NECAP2
CLUAP1
SMU1
AMD1
TTLL1
LRIG2
CDC73
TRMT2A
VIRMA
MRPL3
SNRPB2
RAB18
TGFBR2
LRP6
PRDX3
ALG10
PLEKHM3
N4BP2L2
LRRC37A3
TEX50
CDYL
FAM98B
CADM2
ZNF280D
AGK
PRRC1
GFI1B
MTOR
SMG7
FBXO38
TTC13
CCR6
SEC22B
CALCRL
LNPEP
MTR
PUS10
PEX13
WWTR1
CENPV
TIGD1
EIF4E2
WBP1
MAGOH
INO80B
KAT6A
RNF125
SACM1L
DLAT
ZNF605
NFAT5
TMED1
R3HCC1
ZNF165
CCDC88A
RBM45
ZSCAN30
PIP4P2
AARS2
SNRPE
COA6
NBPF1
CDK19
PDCD6IP
LSM5
CRYAA2
CRYAA
ZNF554
FOXN1
CASP10
DHRS2
PIH1D2
NKAPD1
ANKRD40
RPL5
PPP5D1
CALM3
MRPS14
PPIAL4F
PPIAL4E
PPIAL4D
LPIN1
TRMT5
SLC38A6
TSGA10
C2orf15
CLTC
STOML2
TIAM1
RPS15
ZNF438
HAX1
KMT2D
AVL9
ACSM2B
ZSCAN22
SRRM3
MYCBP2
SNRPD3
GUCD1
RNF6
DPP8
AAR2
SUGT1
FAM234A
DDX1
GABPA
ATP5PF
VPS13B
SPSB1
MSL2
TEX9
RFX7
PRKAG2
CEP85L
SRP9
CASS4
PPP2R5B
PRMT5
POM121L2
ZNF76
SMIM13
KRR1
THAP6
TTC5
U2SURP
NMNAT1
LZIC
H4C12
MRPL16
C10orf88
WWOX
CLUL1
ZNF383
MFF
ZNF512B
TMEM42
CEP120
ITFG2
YTHDF2
PRKAB2
TRAM1
CDIPT
SLC35E2B
MAPK1IP1L
HLA-E
TBCK
AIMP1
PRPSAP1
STK19
DXO
CREM
MRPL39
NOXA1
ITGAL
RBM28
RPS3A
CBWD5
EPB41
SEL1L
DHX16
ZZZ3
RCAN1
PCBP2
NOTCH2NLA
MRPS33
HIP1
GSPT1
ERCC6L2
GCNT1
WDFY1
SGMS2
TBL1X
PTPN4
SLC35B1
CNN2
NUP107
GLIPR1L2
LRRC59
ATG101
ZNF385A
RRN3
ZNF439
TMEM259
ZNF546
SLC35G5
MRPL19
PPP1R3B
SDCCAG8
CEP170
FBXO22
TRDMT1
PDRG1
EEA1
LTA4H
ARRDC2
ZNF425
SEC14L1
H4C11
NSUN4
NDFIP1
RPS19
TFPI
ASF1A
PFKM
MAP1LC3B2
DHTKD1
MEMO1
SOD2
RALBP1
TULP4
GNB2
ZNF518A
HNRNPA1L2
DNAJC11
SAE1
RABGGTA
STX6
KNL1
CDK12
CYB561D1
XKR7
RESF1
HEXIM1
METAP1
KIF2C
CELF2
ELAVL3
PES1
ARMH3
MED4
ZNF846
PHF21A
IFI44
CNOT11
RTN4
TSC1
PAK1IP1
C6orf52
CYB5A
ACBD6
SET
MMEL1
STC1
NUDT9
SEC14L5
ATG4C
CCDC115
ZNF770
MTMR6
FAM13A
C11orf49
SLC39A3
LMBR1L
UGCG
RRP15
DCT
TLR1
ATG5
ABCC10
FLT3LG
TM9SF4
EIF2B3
TVP23B
CUL2
ZER1
RIF1
NT5DC1
DISP1
SMIM12
POLR2E
LRRC61
HEATR1