ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX9823128 | GM12878
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX10976388: 293

◢ SRX10976389: 293

◢ SRX150671: 293

◢ SRX16676305: 293

◢ SRX16676306: 293

◢ SRX17826856: 293

◢ SRX17826857: 293

◢ SRX17826858: 293

◢ SRX17826859: 293

◢ SRX17826860: 293

◢ SRX17826861: 293

◢ SRX22117740: 293

◢ SRX22117741: 293

◢ SRX22117742: 293

◢ SRX22117743: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX1799522: CD4+ T cells

◢ SRX1799525: CD4+ T cells

◢ SRX1799528: CD4+ T cells

◢ SRX1799531: CD4+ T cells

◢ SRX671999: ES cells

◢ SRX672001: ES cells

◢ SRX672002: ES cells

◢ SRX9823127: GM12878

◣ SRX9823128: GM12878

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX11220464: HT-29

◢ SRX11220465: HT-29

◢ SRX11220466: HT-29

◢ SRX9977682: HUVEC

◢ SRX1925740: iPSC derived neural cells

◢ DRX402530: K-562

◢ DRX402531: K-562

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX5457586: K-562

◢ SRX5457587: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX12813813: MCF-7

◢ SRX12813814: MCF-7

◢ SRX1497516: MCF-7

◢ SRX7030916: MCF-7

◢ SRX7030917: MCF-7

◢ SRX7030918: MCF-7

◢ SRX7030919: MCF-7

◢ DRX402534: MYL

◢ DRX402535: MYL

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

FRG2C
STARD10
IPO13
CTU1
C1orf159
PHF13
RANGAP1
TBC1D23
POLR2J3
AURKAIP1
CALCOCO1
MTRNR2L1
RAB5C
DESI2
INTS9
HMBOX1
GTF2H4
SDCCAG8
CEP170
TNFAIP1
IFT20
EIF1B
DHX34
RPGRIP1L
FTO
LOC100289561
TIMM13
MEA1
KLHDC3
FRG2
IL21R
TIMM22
PES1
HEXIM2
IFRD2
RTTN
PSMC4
CCDC59
JOSD2
ASPDH
PACC1
NOLC1
TMEM245
MRPL24
CLIC4
DUX4
ZNF56
SCNM1
LYSMD1
NOL11
ENDOG
TSSC4
RALBP1
ZNF565
ZNF146
SEC11C
PAFAH2
MMACHC
CCDC163
LRRC37A3
CFAP20
PHB
CCDC174
TSN
NUDCD1
PANK3
FEM1A
PSMD3
ZNF286A
STXBP3
FBF1
EFCAB2
L3MBTL1
KPTN
RBAK-RBAKDN
RBAK
SCGB1C1
C19orf25
MYO15B
ZNF444
TMEM208
LRRC29
GNAI2
SNX27
SUGCT
MPLKIP
PNKD
AAMP
CARM1
ZNF189
MRPL50
TMEM115
FNTB
DUS3L
CHMP4B
EEPD1
GORASP2
BTRC
ZNF585A
HYAL1
NAA80
HYAL3
LRFN3
CIPC
CHD8
MICOS13
HSD11B1L
KNTC1
CLPB
SLC4A2
CDK5
AP2S1
TPR
ODR4
CDK13
DHX16
RAD23B
EML6
SH3GLB2
PSMD2
AHCTF1
SNX3
CHFR
NDUFV1
ZNF235
SAC3D1
ANO10
WDR62
THAP8
UPK3BL1
MRPS22
RMND1
ARMT1
GOLGA5
CHMP5
BAG1
BOLA1
ZNF559-ZNF177
ZNF559
WBP1
INO80B
RPL5
LANCL2
PRCC
FIS1
VPS35L
ZSCAN22
C11orf49
STK25
DNM1L
GSK3A
SPHK2
RPL18
FAM83E
BRMS1
B4GAT1
ACIN1
C14orf119
RAD52
PSMD8
COQ8A
QTRT2
CCDC191
C19orf67
FAM133B
ZNF566
NPAS1
CBWD5
CXXC1
SERF2
TMEM127
ZFYVE19
DNAJC17
CIAO1
SERTAD3
CACTIN
GALNT1
RNGTT
COX16
EPRS1
ZW10
TMEM59
SMUG1
DDX11
SLC37A4
CLP1
MRPL48
IPO7
IFT88
ZNF268
ZC3H11A
ZBED6
PLCD1
RETSAT
UBR2
BAX
OCEL1
PRPSAP1
SLC35B4
RPS27A
CLHC1
FBXL19
P4HA1
ZFYVE1
PPP1R12C
KMT5A
CKM
TTC13
ZNF527
CBR4
UBXN7
C16orf91
TTC31
CCDC142
PRMT2
GSPT1
ZNF599
ATL3
PCM1
SDR39U1
SOX6
AP2M1
C11orf58
SKP2
LMBRD2
SMIM13
THOC3
MRPL17
MAP3K7CL
CCT8
AHCY
ARRB2
FAF2
C12orf43
GFI1B
TSC1
MAD2L1BP
VPS26C
GTPBP2
SLC33A1
RPL26
TAOK3
TSNAX
ERICH4
C5orf24
DMAC2
ORMDL3
MAP2K7
ABI1
SUDS3
NUF2
RAB18
INKA2
DDX20
PSD
FBXL15
SF3B5
TAF5
DCAKD
ZNF420
ZNF773
USP32
DIXDC1
CRYAB
NMT1
ZNF473
VRK3
EEF2KMT
HEMK1
C3orf18
ZNF25
HNRNPA3
GAL3ST3
SF3B2
CDK12
SURF6
EEF1A1
OGA
POLK
CERT1
NFXL1
CCDC146
PPP4R3B
RPS12
RB1CC1
ZFP14
PHF12
B3GAT3
MRPS31
SCARF1
RILP
SERBP1
GDAP1
FBXO46
PPP1R12B
MEIOSIN
SMPD3
TSNAXIP1
RANBP10
BANP
INPP5A
FBXO34
NOP14
GRK4
ZNF225
NOL6
ANKRD10
ZNF586
RCOR3
MRPL38
INTS10
SLC39A11
SYMPK
FOXA3
SH2D3A
VAV1
PLK3
DYNC2I1
COX14
SCAF1
RRAS
RELL1
WWOX
ATP5MPL
ZNF461
ZNF79
UBQLN4
LAMTOR2
FZR1
ZNHIT2
FAU
DDX47
SUCLG1
CKMT1A
TMUB2
ZCCHC4
C10orf88
RIF1
GOSR2
ZNF891
ZNF10
TMEM18
RPS6KB2
LARS1
SMU1
INTS4
PEMT
ELMOD2
PFKFB4
ZBTB37
MTCH2
C6orf136
CHAC2
SEMA4F
COPS4
WDFY2
CAPG
CDC27
SH2D6
ZC3H3
SAFB2
SAFB
SIX5
SCGB1C2
ZNF350
STMN3
RTEL1
TIMM10
POLR2H
CLCN2
CNPY2
YWHAG
STYX
SCAI
CPT1B
CHKB
R3HCC1L
ZCCHC8
KLHL12
ERCC4
PDCL3
SLC25A11
RNF167
ZBTB45
ZNF383
PLD3
C19orf47
THNSL1
ALAD
TRIM28
RAB1B
NDUFS7
LRIG2
TSGA10
C2orf15
EMILIN1
CEP164
VPS50
HEPACAM2
SF3B1
FHIT
SMG1
CMTR1
UBTD1
MMS19
ZNF84
HARBI1
ATG13
CEP128
ECSIT
TMEM222
CDK11A
MUC1
THYN1
ACAD8
ZNF585B
CDK11B
TMTC3
CEP290
PHF23
GABARAP
CLPX
HSPA13
ESRP2
GBA
SIRT4
SERP1
EIF2A
NEURL4
ZNF576
IRGQ
ZC3H4
ACP6
CEP20
SLC25A20
TCOF1
FAM187A
EFTUD2
CCDC103
RNF14
ZHX1-C8orf76
ZHX1
TMED4
SRRM2
ATF2
MIGA2
PCBP2
PTCD1
CPSF4
CDK5RAP3
ZNF416
MARK2
ZIK1
NACA
FAM126A
ZNF284
FYCO1
UBXN4
TRIM59
MAK16
ECH1
NME1-NME2
NME1
ZNF331
PA2G4
POLE3
C9orf43
CEP97
ZFHX2
THTPA
PPP2R5D
MTIF2
POLR2E
PPP6C
MCCC1
THRAP3
SPTBN4
BLVRB
MYORG
C9orf24
DOP1B
PLAUR
ZNF408
ARHGAP1
FRG1
B9D1
RRP9
PARP3
HSPBP1
BRSK1
TMED7-TICAM2
TMED7
MAPK7
ASNSD1
ASDURF
EEF1G
MEN1
SETD3
CCNK
EIF3F
MRPS14
GLIPR1L2
CYP20A1
PRKCSH
CCDC151
SRCAP
LOC730183
ZNF589
CCAR1
STRIP1
ATP6V1FNB
PIK3R2
ATP6V1F
SESN2
SPEGNB
GMPPA
PARP2
CUL2
DNAJC16
CASP9
EFHB
RAB5A
SKIV2L
NELFE
VDAC2
WDTC1
ALKBH5
CTNNBL1
SETMAR
GPANK1
CSNK2B
C6orf47
SYNGR4
CAPN10
LY6G5B
TSEN34
MBOAT7
CCAR2
C8orf58
SIVA1
MFN2
PSMD1
TIAL1
OSCAR
NDUFA3
DIABLO
TOMM70
LNP1
POMT2
GSTZ1
RPL7
RDH10
BRF2
DCLRE1B
AP4B1
RPL29
NRL
SNAPC3
DCAF11
TMEM199
POLDIP2
NHEJ1
SYCE3
CDK8
NBEAL1
ATG5
ZNF212
AAAS
ERI1
RAB1A
ZNF451
KBTBD7
MPI
TMEM229B
CNIH1
RNF43
RPL18A
ZMAT5
UQCR10
CCDC130
SLC35E2A
SH2B1
WDPCP
MDH1
C19orf48
RAD51AP1
C12orf4
C7orf25
TUFM
UTP23
DIMT1
UTP6
ZNF772
SLC25A19
TAOK2
PSMD12
USP14
DNAJB12
CPPED1
TMED1
ZNF335
PSMD11
MRPL45
BORCS7
MVB12A
GAPVD1
CAAP1
TPRKB
CDK5RAP2
SCAMP3
GATB
ZNF140
THOC6
HCFC1R1
TNFRSF12A
ZFPM1
GTF2H2C_2
GTF2H2C
CCDC77
SRP54
ZNF337
TFB2M
CNST
TRIM23
TRAPPC13
SHLD3
DCAF1
ZNF7
ZMPSTE24
HMGB1
USPL1
BNIP1
METTL9
SESN1
CEP57L1
STRADA
MKNK1
IARS2
BPNT1
EIF3D
RPS11
VKORC1
STAT2
APOF
ESCO2
NTAQ1
RPL27
CDC73
ARMH3
MRPS35
ZNF419
PKN2
APC
TERF2
FAM220A
UBFD1
EARS2
RPL35
ARPC5L
SPATA25
NEURL2
CTSA
CD82
WDR87
SIPA1L3
MZF1
SLC39A13
ALG10
HTRA2
DQX1
COMMD1
GSN
TBCB
POLR2I
OVOL3
AHCYL2
RAB14
ZNF787
SDHB
DLG4
ACADVL
SRPRA
THEM4
CTDP1
UBE4A
DDX23
LUC7L2
FMC1-LUC7L2
FMC1
ICE1
RHBDD3
EWSR1
DCAF12
REXO1
PARD6B
CBX8
L3MBTL2
HSPE1-MOB4
HSPE1
HSPD1
TIPARP
RSRC1
APEH
TAF12
YIPF2
TIMM29
SHOX2
UBE2J2
VCPIP1
C8orf44-SGK3
ORC4
MBD5
RBM28
TVP23B
RWDD1
ABL1
ZNF180
ZNF446
ARNT
RPL23A
RAB34
YPEL5
SKAP2
PMM1
IRF7
DRG2
ADSS2
C12orf29
BCAS2
DNAL1
ZNF417
NRTN
RALGAPA2
DCP1B
PPRC1
CD55
RABIF
ZNF573
BARD1
CC2D1B
HINFP
CCDC150
ZNF567
PPP4R3A
ZDHHC12
NIPSNAP1
ZNF274
PSMB7
MFSD8
ABHD18
IBA57
ZNF26
LEPR
SGCA
ZNF133
MYBBP1A
AOPEP
LEPROT
AFG3L2
PPP1R35
DELE1
SAMD8
DUSP13
EIF3E
YTHDF2
MARCHF2
KIAA0895
HPCAL1
INVS
ERP44
FAM160A2
CNGA4
SEPSECS
MBD1
SPRYD3
EP300
TCF19
CCHCR1
TTLL12
VTA1
NMBR
SNX17
EIF2B4
MGST3
USP35
KCTD21
TRAPPC3
MORC3
PPA1
SNF8
PLEKHB1
PARS2
LYSMD4
LZTR1
ADPRS
TEKT2
RRP15
NUDT15
TIMM50
PGRMC2
TSPAN17
UHRF2
THOP1
SGTA
RAB10
ZNF468
ATP5PO
TOMM20
ATP6V0D1
AGRP
ATAD2B
CCDC6
NKIRAS1
EIF5A
RPL15
TSACC
CCT3
MIB1
ZNF749
SAE1
PPOX
PKD1
RTL10
GNB1L
C2orf42
SPAST
VTI1B
POLE4
IPPK
NAPA
SLC10A7
SH2D3C
DENR
LCORL
ASH2L
ZNF878
ZNF845
DDX41
DEDD
ZFC3H1
THAP2
MINDY2
CCNT1
ZNF605
MTIF3
ARL6IP1
TOGARAM1
KLHL28
USP19
PITPNB
ETFB
SPAG1
NKG7
CLDND2
NME4
PRRG2
NOSIP
XPC
LSM3
POLR2J
NOL7
CFAP410
MGRN1
KMT5C
DECR2
POLD1
CCDC24
ZNF169
RIN1
ZNFX1
TESK1
TOMM40
CMSS1
SMG8
SEC22B
CSTF2T
BDH1
EIF2S2
PDCD6
SLC17A5
PABPC1
GRSF1
SHBG
FXR2
TMEM214
DNAJC25-GNG10
DNAJC25
TOR1AIP2
TOR1AIP1
FBXL12
RPS20
MRPL42
SLC35A4
APBB3
HNRNPH3
PBLD
MEIG1
NUDT5
CDC123
ELP5
CTDNEP1
MBTPS1
DYNLT1
GALK2
COPS2
KIF2C
TMEM87B
MAN1B1
DNAJC18
GPER1
LRRC42
HSPB11
ST20-MTHFS
PAXBP1
MTR
ZZEF1
CYB5D2
HOXC6
SETDB1
KIFC1
S100A13
PITRM1
RGL1
NAMPT
MATR3
ARPC5
COX5B
CHTOP
IPMK
CISD1
RHEBL1
HSP90AA1
WDR20
HOXC4
GOLGA3
RPS6
FAM200B
PGM2L1
SLC39A7
RXRB
HSD17B8
ZNF134
ZSCAN32
ZNF174
EIF3C
TXNDC17
KIAA0753
EIF3CL
IKZF4
FAM135A
GATAD2A
MESD
GINS3
ZCWPW2
AZI2
SMIM26
ELOF1
LETM1
NIFK
KDM3A
HNRNPD
TMED2
SIRT6
ANKRD24
IMPA2
DGAT1
KIF20A
BRD8
MLF2
ITSN1
CRYZL1
COX7A2L
SMARCAL1
ZNF574
TTC12
GMPS
MICU2
PI4K2A
H3-3B
UNK
RAB8A
SHPK
CTNS
GABPA
ATP5PF
MRPS15
TCF25
ZNF184
PTK6
UBALD1
TEX22
TNFAIP8L1
GOLGA7
TMEM102
FGF11
NOP16
HIGD2A
SRSF11
RPS18
VPS52