ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1799525 | CD4+ T cells
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX10976388: 293

◢ SRX10976389: 293

◢ SRX150671: 293

◢ SRX16676305: 293

◢ SRX16676306: 293

◢ SRX17826856: 293

◢ SRX17826857: 293

◢ SRX17826858: 293

◢ SRX17826859: 293

◢ SRX17826860: 293

◢ SRX17826861: 293

◢ SRX22117740: 293

◢ SRX22117741: 293

◢ SRX22117742: 293

◢ SRX22117743: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX1799522: CD4+ T cells

◣ SRX1799525: CD4+ T cells

◢ SRX1799528: CD4+ T cells

◢ SRX1799531: CD4+ T cells

◢ SRX671999: ES cells

◢ SRX672001: ES cells

◢ SRX672002: ES cells

◢ SRX9823127: GM12878

◢ SRX9823128: GM12878

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX11220464: HT-29

◢ SRX11220465: HT-29

◢ SRX11220466: HT-29

◢ SRX9977682: HUVEC

◢ SRX1925740: iPSC derived neural cells

◢ DRX402530: K-562

◢ DRX402531: K-562

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX5457586: K-562

◢ SRX5457587: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX12813813: MCF-7

◢ SRX12813814: MCF-7

◢ SRX1497516: MCF-7

◢ SRX7030916: MCF-7

◢ SRX7030917: MCF-7

◢ SRX7030918: MCF-7

◢ SRX7030919: MCF-7

◢ DRX402534: MYL

◢ DRX402535: MYL

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

GBA
THEM4
CAMK1D
DUSP6
SMCO1
GDPGP1
CIB1
ANXA2
PAXBP1
ITGA4
PUM1
SFT2D3
ITGAL
FRG2C
SPATA13
LIME1
STX6
GCNT7
FAM209A
THAP11
NUTF2
CENPT
YPEL3
FAIM
SF3A3
TBL3
RNF151
PPIAL4F
PPIAL4E
PPIAL4D
FNBP1
FRG1
ZNF571
ZNF540
ZNF792
SSBP1
SORL1
TTLL12
NUF2
DDX18
SYTL2
PSTPIP1
ZNF827
ZNF226
CD69
RUNX2
SKP2
LMBRD2
VTA1
NMBR
DMAP1
GPR68
ASB2
MRPL44
ZBTB20
NDUFS7
GMPS
GLS
TNRC6B
APBB1
EXO5
STAG3
GPC2
TMEM255A
DCP1A
FRG2
TFPT
PRPF31
MYCBP2
USP25
PPIP5K2
GIN1
HMGB1
USPL1
SCNM1
LYSMD1
HNRNPD
NME1-NME2
NME1
NAP1L3
FAM133A
ARHGAP15
TDP2
ACOT13
STX16
AP2B1
DUX4
COX16
CLUAP1
ALG10B
GTF2H2C_2
GTF2H2
ADPRS
TEKT2
GTF2H2C
NSUN6
FAM227B
DTWD1
CHMP5
BAG1
MED18
SLC29A2
PSD4
NTRK1
SH2D2A
IPO4
IRAK2
ORC4
MBD5
RPL37
POLR3B
PCYOX1
SATB1
DCAF10
GTPBP10
BRWD3
APOA1
NDST2
MED23
ELOVL5
ARHGAP9
MARS1
RPS7
KMT2A
KCNJ15
SETD1A
MBOAT4
FRA10AC1
CEP68
SEC23B
NAT10
GATM
SPATA5L1
LEPROTL1
LY9
RRN3
RAB18
CCNT1
PHB2
TRAM1
MTF2
LCK
SNRPB
FLI1
INTS12
GSTCD
NLRP1
P3H4
FKBP10
ZNF791
ZNF490
RPL27
TOR1AIP2
TOR1AIP1
ADORA2A
NDUFB3
FAM126B
CCDC59
TES
PWP1
ERCC5
EIF3E
ATP5MPL
ARID1B
LIPA
NUP133
CTNNB1
NDUFAF1
CNIH1
FGFBP3
HTT
PEX3
ADAT2
C16orf54
RAB5C
NR4A3
DNAJC25-GNG10
DNAJC25
PRRG2
NOSIP
TATDN3
NSL1
GABPA
ATP5PF
WWOX
RBBP5
EIF2D
CPEB4
CBR4
GOSR1
LSP1
ING2
GTF2H3
EIF2B1
MDGA1
TMED2
SCAND1
SNX17
EIF2B4
PSRC1
SNX16
NSA2
GFM2
TSGA10
C2orf15
ZC3H13
PGBD4
EMC7
SCP2
PGK1
ADAP1
RPS11
LSM8
ZC3H15
EPS8
TPR
ODR4
BCL9
LDB1
SAMD4B
NOTCH2NLB
SIRT6
ANKRD24
VPS29
RAD9B
SURF6
WDR36
UBE2O
AANAT
TPP2
GPAM
NPAS4
ABLIM1
TUT1
ALG10
SMAD7
PRRC2B
PTK2
STX18
STOML2
ANXA2R
RPL26L1
USP45
SF3B1
CCAR2
C8orf58
RHOG
ING4
MRPS23
ZZZ3
POLR3A
RPS24
ZNF555
RPL29
MTRNR2L1
BCL3
SNX5
MGME1
UBA3
ARL6IP5
PRKCE
NOTCH2NLC
WDFY1
TRMT6
MCM8
GALK2
COPS2
ZNF829
ZNF568
DDX46
ZC3H12D
MTMR9
SMG6
ZNF408
ARHGAP1
WDR55
TTC32
SELPLG
RMDN1
GAA
CYP20A1
IL2RB
PFAS
STARD6
C18orf54
CBWD5
CBWD3
CBWD6
SLC33A1
MRPS16
MRPL53
POLG2
MFSD8
ABHD18
TBC1D10A
SDHAF3
MED4
ATG5
TMEM222
SS18L2
VPS11
MRPS31
PPP4R3B
KLHL20
SNRPD1
UBE4A
NOTCH2
SPRYD4
GNAI3
SNAP47
JMJD4
RSL24D1
RPS16
PPP6C
RALBP1
ZNF44
COL23A1
EFHB
RAB5A
ECSCR
RPL22
TLR6
MITD1
MFF
MRPS18C
HELQ
EXOSC9
FBXW7
MRPL21
IGHMBP2
BUD13
CBWD2
ZNF846
EIF3F
C1orf74
TMEM87A
GANC
RANBP3
WBP1
INO80B
BTRC
EXOC5
AP5M1
LCP1
NUP214
RRM1
TAF12
TMEM230
DGKA
PYM1
RPS15
SELENON
RAB43
PSMF1
THOC3
PPME1
C2CD3
NOC4L
DDX51
ATR
CHMP1B
RABGAP1L
KCTD5
ACAA2
TRNAU1AP
XPC
LSM3
KDM7A
ARHGAP45
FAM228B
SF3B6
ZFPL1
TMEM262
CDCA5
PRKAG1
TADA1
RGL2
WDR76
MFAP1
ARAP1
FITM2
CAMK2D
KANSL1
MAP3K7CL
CCT8
RAD54L2
HAX1
GPR65
LNPEP
ELP3
HERPUD2
EIF1AD
BANF1
MAP1LC3B2
NDUFA12
PUM3
ST20-MTHFS
ZMPSTE24
TCTE3
ERMARD
TESPA1
CDK11A
MLEC
ARID1A
RPS20
SECISBP2L
WIPF1
AOPEP
C10orf88
IFIT3
TMEM68
TGS1
EXOSC6
CEP85L
RPS12
USP4
PRPF18
KRTAP16-1
TMEM116
ERP29
ACOX3
TRMT44
DPYD
ZC3H3
TEX9
RFX7
NDUFAB1
MTIF3
FYN
SLC25A51
BIRC3
ARF6
TMEM242
SUGT1
CD2BP2
NOTCH2NLA
VWA8
HILPDA
TBC1D19
PSMD3
MGAT1
EDEM1
TRIP4
ZNF3
ZNF501
WASHC2C
NSUN4
BRIX1
THUMPD3
MRPL10
LRRC46
ENO1
FAM207A
NUP107
NDUFB6
RESF1
API5
R3HDM4
ACTR6
CDK5RAP1
CANT1
TTI2
THNSL2
KIAA1191
ARL10
UTP23
OCIAD1
FKBP1A
UBE2F
IL16
PKN2
RPS29
PA2G4
NR2C1
WDR4
PXN
SAP30
SLC44A1
ATXN7L3B
ZNF562
ADPGK
EGR2
ADH5
MAD1L1
PHF21A
MTPN
LUZP6
ZNF567
SEC31A
RPS13
BACH2
ABCD2
CD79A
ARHGEF6
PAFAH2
DFFB
CEP104
PHKB
ITFG1
STRADA
ITPRIP
ZBTB2
UTP25
BACH1
UFL1
RMND1
ARMT1
SEC22B
NFAT5
HNRNPA1L2
FADD
LAX1
PSMD6
STK17B
GPR171
PTPN4
WDR70
SLC7A6OS
PRMT7
CRADD
UNC50
COA5
OXA1L
RGS1
UBL7
RGS14
SGO1
LDLR
COPS4
MRPL19
PPP1R18
EVI2A
HBS1L
PIH1D1
ALDH16A1
GRWD1
RER1
MORN1
PBXIP1
WDR43
BRF2
RANBP2
ATP1B3
NOB1
PTPN22
MRPL52
NOXA1
NDUFS2
ADAMTS4
CAP1
YBEY
MCM3AP
SYT11
GON4L
DOK2
METTL18
C1orf112
FAM167B
SPDL1
CHERP
RETSAT
BCDIN3D
ARHGDIB
ITPKB
TSEN15
TMEM186
PMM2
EPRS1
PSMB7
CASP8
ZNF805
SMIM26
CELF2
INTS4
ZNF821
CWC25
SKIV2L
NELFE
ARPC2
ADAR
TRMT61B
S100P
RUNX1
PLEC
RCC1
C17orf75
ACTR3
GGNBP2
HIF1AN
UBA52
POLR2J3
ICAM2
GZF1
EIF1B
PSMG1
EIF2B2
XRCC2
SPTLC1
DRG2
DHX16
GSPT1
AGGF1
SLC38A2
RIC8A
BET1L
VIRMA
U2SURP
INO80D
ASXL2
SNRPC
C17orf100
RSPH14
MED31
RAB36
PPP1R11
RUVBL1
C18orf25
TIMM23
ZNF668
ZNF646
ZNF302
BBS2
LSM5
AVL9
DPP8
RPL38
AP3B1
PDE4A
PIK3R4
PPIAL4C
CCDC86
FLT3LG
RAB8B
ZNF318
RTF2
LRRC37A3
PPIH
NARS1
ZNF286A
SPN
MTRES1
UBR4
LSG1
SLTM
TSFM
ZCCHC8
ZNF91
MAL
SUN2
POLR1F
MRPS35
DAXX
SNUPN
ZBTB22
NDUFS1
EEF1B2
RAB37
AQR
C3AR1
POLR2H
CLCN2
IRF2BPL
PARP8
POLE4
SLC30A6
PDE8A
SLA
HUS1
CABIN1
ANAPC10
ABCE1
PEX12
ITCH
TMEM41A
GLO1
USP30
NR1H2
CPPED1
CCAR1
DDX19A
ATAD1
ZNF605
EIF2B3
RGL4
SRP19
RWDD1
COX6A1
FBXO43
POLR2K
NDUFB5
MRPL47
URM1
RTCA
TERF2
SYTL3
ETFBKMT
IARS2
BPNT1
DHPS
TM2D3
POMP
SMARCC1
DSN1
ZFYVE16
MOB4
ATAD5
RAPGEF6
PPP1R16B
NSFL1C
METTL3
ATXN1L
GTF2B
EIF3D
ZNF879
ZBTB43
CBX1
SNX19
TNFAIP8L1
RAP2C
TMEM248
FMNL1
RAD23A
INTS1
PDCD2
BRAP
ACAD10
NOP10
NUTM1
KIF21B
PPIAL4G
PIK3C3
CHIC2
TTLL5
ERG28
RALGAPB
RSRP1
RAD52
ZNF784
SMG8
TTC5
ATP5MC3
TMEM30A
MTERF1
LMNA
AP3S2
CRBN
DSE
DOCK8
TSPYL1
CMTR1
FAF2
ATG4C
EID2B
YIPF5
KCTD16
TRUB2
COQ4
ZCCHC4
SNRPB2
CUL5
VPS72
MMADHC
SLC26A11
SGSH
LINS1
ASB7
CWF19L2
GORASP2
PIGF
CRIPT
TMTC3
CEP290
PRKRIP1
FAM133B
TIMM9
KIAA0586
RIC1
THAP12
GVQW3
CSNK1A1
RBM7
C11orf71
ZNF773
TMX3
CCDC102B
TM9SF2
OGFOD1
NUDT21
XRRA1
SPCS2
COX7C
PIGM
LGALS8
POLR2C
PARN
BFAR
MRPL20
YPEL1
NDUFC1
NAA15
GNPAT
C1orf131
FCHO1
TGFBR2
SYPL1
IL17RA
C15orf40
PPIL4
SEH1L
KIFAP3
CIPC
STK38
RPS3A
CD55
TRIM46
KRTCAP2
TMEM101
SIRT4
PRKAB1
ZNF510
WDR24
TFAM
ZNF134
TRIP11
IGFBP4
TIMMDC1
GIMAP1-GIMAP5
GIMAP1
HACL1
BTD
CASC3
CNN2
TMEM208
LRRC29
ACTRT3
KDM8
TOMM5
SNU13
PRPF19
CDCA8
C1orf109
SELENOH
RANBP1
TRMT2A
EMILIN1
EIF2S1
ATP6V1D
USO1
MGAT5
RNF139
OTUD3
PSMC1
NAPG
ELOF1
DPP9
YTHDF2
ITM2C
EDEM2
MZF1
TMEM167B
CHPF2
PPP1R35
ZBTB40
TTC1
ERGIC3
TPK1
NDFIP1
TBC1D15
TOP3B
MRPL16
SRSF10
DUS2
DDX28
FAM98A
SMG9
HNRNPUL1
UTP15
ANKRA2
SCMH1
BNIP1
NAA20
TMCO1
GNE
MFSD4B
ZNF638
STRN
ASNSD1
ASDURF
NRF1
SNAPC5
ULK4
XPOT
INTS5
PTPRCAP
FAF1
ATG16L1
BLOC1S5
CNOT6L
SRSF9
DYNLL1
TMC6
ZNF248
TMC8
SRSF11
SERP1
EIF2A
RGL1
ARPC5
DCAF1
HSPE1-MOB4
HSPE1
HSPD1
KRR1
SNX18
UQCC1
PTPN23
COPS7B
PDE6D
DNAJC24
DCDC1
SP4
DDX23
IPO11
ZNRF2
C16orf91
SRPK2
TUBA1B
THAP5
DNAJB9
TKFC
DDB1
RCBTB2
NMNAT1
LZIC
ZMYND11
KRTAP5-6
SEC22C
NKTR
NDUFS3
KBTBD4
PDXDC1
SLMAP
VCPKMT
RTCB
DPY19L4
IMPA2
CENPN
ABT1
ZNF189
MRPL50
OR4D1
TOX2
TSN
PNISR
EIF2B5
FEM1C
RB1CC1
NAGK
GPAA1
EXOSC4
MRPL45
IARS1
SNAPC3
PREPL
CAMKMT
DUSP7
MAD2L1BP
MICOS13
HSD11B1L
FOXO1
VIM
SRRD
HPS4
CAT
SAR1B
GFM1
SLC3A2
GCLC
PPM1A
CSK
ZNF561
TPM1
DCLRE1B
AP4B1
UCP3
WDR7
SAFB2
SAFB
PSMA6
ITGB3BP
EFCAB7
NDUFAF5
ESF1
RPIA
SSNA1
ANAPC2
MAP3K7
CDK5RAP2
INPP5K
RACGAP1