ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1925740 | iPSC derived neural cells
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX10976388: 293

◢ SRX10976389: 293

◢ SRX150671: 293

◢ SRX16676305: 293

◢ SRX16676306: 293

◢ SRX17826856: 293

◢ SRX17826857: 293

◢ SRX17826858: 293

◢ SRX17826859: 293

◢ SRX17826860: 293

◢ SRX17826861: 293

◢ SRX22117740: 293

◢ SRX22117741: 293

◢ SRX22117742: 293

◢ SRX22117743: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX1799522: CD4+ T cells

◢ SRX1799525: CD4+ T cells

◢ SRX1799528: CD4+ T cells

◢ SRX1799531: CD4+ T cells

◢ SRX671999: ES cells

◢ SRX672001: ES cells

◢ SRX672002: ES cells

◢ SRX9823127: GM12878

◢ SRX9823128: GM12878

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX11220464: HT-29

◢ SRX11220465: HT-29

◢ SRX11220466: HT-29

◢ SRX9977682: HUVEC

◣ SRX1925740: iPSC derived neural cells

◢ DRX402530: K-562

◢ DRX402531: K-562

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX5457586: K-562

◢ SRX5457587: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX12813813: MCF-7

◢ SRX12813814: MCF-7

◢ SRX1497516: MCF-7

◢ SRX7030916: MCF-7

◢ SRX7030917: MCF-7

◢ SRX7030918: MCF-7

◢ SRX7030919: MCF-7

◢ DRX402534: MYL

◢ DRX402535: MYL

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

FRG2C
FRG2
CBX1
BCAR3
KLF4
SMCO1
DUX4
POU5F1
JMJD1C
REEP3
KLF14
SRSF5
TMEM216
SOX2
ATP9B
COL23A1
DBNDD2
LUC7L2
FMC1-LUC7L2
FMC1
EXTL2
ELOVL2
UBE3A
FAM184A
POU5F1B
C1GALT1C1L
CCDC130
C3orf14
PLXDC2
RAB37
MAD1L1
DHX40
TMEM43
CHCHD4
KCNJ15
RPL26L1
SIVA1
FANK1
MTRNR2L1
CHMP6
GAGE2C
GAGE2B
GAGE2A
ATP1A1
FEM1C
RPS14
ITGB3BP
EFCAB7
MTF2
TLR2
HNRNPL
TMEM44
ENOSF1
PAQR9
PTGES2
NBPF1
FAM227B
DTWD1
RNF187
ANK1
SPDYA
USP30
RTTN
VN1R4
SERPINB1
ZFP30
BRWD1
PEX3
ADAT2
SPATC1L
TTLL12
HMGB1
USPL1
PNPLA7
CD47
TRAF6
RAG1
DHRS7
PDCD7
SOX30
C5orf52
SAMD4B
TRDMT1
SLC11A2
ZNF584
AVPR1A
POTEH
C2orf88
ZKSCAN2
DCP1A
SLC39A6
POLR2J3
SDCBP
TFPI
ANO5
ANP32D
CCDC200
ANKRD18B
C19orf18
ANKRD54
EIF3L
XKR6
EIF2S2
ZCCHC7
GMDS
DUSP16
MRPL22
GEMIN5
NEIL3
ARMCX1
COLEC11
HUS1
IQGAP2
TMX4
CLGN
GAGE7
GAGE6
GAGE5
GAGE4
GAGE12I
GAGE12B
GAGE12F
NUF2
TMEM242
RAD54L2
SCGB1C1
LBR
NEK7
SLC10A7
BTBD10
KAT6B
RIPPLY3
RPAP2
GLMN
TMEM98
TMEM41A
CAT
CT45A10
DNM3
STX16
PCDHB5
ARHGAP39
SLC44A1
MTRNR2L8
MRPL40
HIRA
NEMF
DNMT3L
STX18
MIS18BP1
ZSWIM9
LIG1
ADAMTS20
KBTBD7
C3orf80
ZNF416
ZIK1
ZNF572
GTF2A1L
OR8B3
RNF38
CNTLN
ZNF562
ZMYM5
PPP2R2B
NUP54
PLCL2
HECTD1
EIF5A2
TASOR
PCDH17
CTNNB1
CRH
RFK
PRPF40A
ARL6IP6
NLGN4X
NSFL1C
PGBD2
ELF1
WBP4
C1orf53
BTG1
PRELID3B
ILRUN
DLAT
FAM153B
PSMG1
PARP16
KLHL7
GPR150
YPEL3
INPP5F
YBEY
MCM3AP
SULT1B1
USP35
KCTD21
AGBL3
RUNDC1
PTGES3L-AARSD1
PTGES3L
ZC3H12C
MRPS31
SNRPB
TARS3
CLTC
PJA2
DNAH6
AP1AR
YTHDF3
TMEM229A
FKBP9
PTPN12
OPRK1
LRP6
MARCHF7
FIGNL1
HSPA2
ACBD6
ADAM22
RIMS2
ZNF623
RPL11
HLCS
KCTD3
WNT2B
GRID2
AP3S2
DEK
KANSL1
USHBP1
ATL3
GAGE12G
GAGE12D
GAGE12E
GAGE12C
CLK4
RNF130
EPS8
KLHL41
CNTRL
C5
PPP1R9A
PCDHB4
SLC25A53
GDAP1
PEX2
ZSWIM5
TNFRSF11B
COLEC10
GLRB
AKR1E2
C18orf21
UTS2B
CCDC50
KCNN2
ZNF280D
TRMT5
SLC38A6
TTC5
SELENOT
ARHGEF12
RANBP2
LRRC8C
RPS29
NARF
CYBC1
LGR5
MRPL48
FAM98B
ZNF518A
KBTBD3
AASDHPPT
SVOPL
CLOCK
CARS2
DSTYK
MRPL21
IGHMBP2
SMIM13
ZNF26
PPP2CA
ATG10
HACD3
POLE4
RMDN2
ALKBH3
TULP4
MED4
DR1
SMAD5
VPS37A
CNOT7
ALG1
BOLA1
ACYP2
TMA16
BCKDHB
FBXO34
SLC39A8
PARP4
C15orf61
CERS6
PCDHB14
PCDHA4
REXO4
ADAMTS13
NOTCH2NLC
HYAL1
CCNI
C5orf34
MS4A1
P4HA1
FHAD1
MTHFS
PCDHGB7
DDX60L
PCDHGA11
PRKD3
SNIP1
DNALI1
CDYL
ZNF286A
CTSC
C12orf73
GADD45A
EPM2A
AKNA
P2RY1
LRATD2
NAPG
SPATA7
TMOD3
NOL12
HYOU1
ZNF25
MRAP2
BTG3
STBD1
RAD23B
XKR4
ADIPOR1
HPS3
NELFCD
SORCS1
INTS12
GSTCD
ZNF391
RNF125
RNF6
ZNF791
ZNF490
CALM2
THOC3
ELOVL1
TAS2R4
ZC3H15
ACAT1
SNRNP48
SSH2
WASHC1
NANOGP8
PIK3CA
MRPS5
SMARCAL1
MFSD14A
RRAS2
CTXN2
OTOP1
MYEF2
SGIP1
KRBA1
TMX2
MED19
RSRC1
UBE2D3
FZD1
EEF1AKMT2
SHOX2
EIF4G2
CPD
SLC25A18
OR4K3
SAMD13
APOLD1
DEPDC1
MTIF2
CPPED1
UBE4B
PXK
CLN5
TYW1B
PCBP3
GPD2
TTLL7
STK17A
ENAH
PCDHGC3
COMMD2
GINS1
SH3BP5L
NFE2L2
ARNT
PPP1R12A
ACP6
E2F7
PIK3R1
RUVBL1
MRPL42
ZNF329
EEFSEC
STAG3
GPC2
RPS6
PHF3
ORC2
HERC4
KAAG1
DCDC2
SRSF12
RFC1
DPY19L4
WDR74
WDFY1
NDUFA6
TIGD6
HMGXB3
CRTAP
GOLGA6L7
ZSCAN32
ZNF174
ANGEL2
MBD4
IFT122
ZNF518B
SH3RF2
SF3A3
SMIM12
VAMP4
PCM1
SMAP1
L3HYPDH
JKAMP
DTD2
FOCAD
GPR155
STX17
TRIM27
HECW2
ZNF829
ZNF568
SLC35A3
MAPK1IP1L
ARL4A
MDM4
LIMS1
SS18
ARFGEF1
TACSTD2
ZNF341
ZSCAN25
CD14
ZC3H6
EIF3D
MTLN
ZNF24
HACE1
CCDC71L
CDC42SE2
HADH
CRHBP
COPS8
DKK1
ZNF544
C4orf36
GNAI1
HSPA1B
MED23
GTF2H2C_2
GTF2H2
SUPT6H
SDF2
NSA2
GFM2
ADAR
PDCD6IP
SCGB1C2
HDAC1
RHEX
UBQLN1
TOMM20L
TYW3
CRYZ
RBM15B
JRKL
CCDC82
HEATR5B
GPATCH11
FH
SVIP
MPP5
COG6
CHST14
LRRC7
SLC25A27
CYP39A1
TJP2
BSDC1
CTAG1B
CTAG1A
TTC32
RBBP9
TATDN3
NSL1
YTHDC2
AUH
MRTFA
OR1E3
OPRL1
LKAAEAR1
SLC25A28
HDAC9
SEC61A2
ARL13A
CEP78
LIN7C
GPR88
LGALSL
RIOX1
PCDHA6
PCDHA5
GTF3C3
RPS3A
PFKM
SENP1
ANKRD36
ZFP42
PDK1
RNASEH2C
NAP1L1
DEPTOR
MRPL17
COX18
CRNKL1
CFAP61
NEK9
SLC16A1
ZNF354C
SMIM10L1
PRH1-TAS2R14
RPN2
MROH8
TBC1D31
TRERF1
SETD5
ZFP2
NT5E
HSPA1L
HSPA1A
PCDHA7
PCDHA12
PCDHA13
AGK
COG2
IQCF2
CA14
SPRYD7
NOL7
AKAP9
ZNF454
DRG2
HTR5A
DUS1L
GOT2
GNAL
SLC35B4
ZSCAN5A
SYT1
FBXL5
ZNF485
PAG1
SDR42E1
KANSL3
FER1L5
NOTCH2NLA
ABCC10
MTMR9
G3BP2
PRDX6
PCDHB10
PUS3
DDX25
FN1
ZNF324B
FASTKD1
PPP5D1
CALM3
PPP1R8
FAM172A
ACTRT3
MPHOSPH10
MCEE
MYNN
MAGEF1
PTPDC1
HECTD2
AATF
RNF138
POLR3D
FNBP1L
PGAP4
ADGRG6
ZNF566
SLC45A4
TLNRD1
RAD52
ANO10
ELF2
HERC3
PYURF
PIGY
ELAPOR2
ABHD5
PCNA
ITM2B
LRRC75A
FZD7
TMEM185B
PTGER3
ATR
DPP8
PSMA1
C6orf89
PPIL1
EGLN1
DNAH7
BTBD1
PRKAR2B
BTF3
NCAM1
PDE3B
RNF32
SYT16
NID2
FRA10AC1
MRPL44
KMT2A
KLHL20
MTBP
MRPL13
REM1
DEFB124
TBCK
AIMP1
AASDH
DCP1B
POLR1F
SRSF11
PKD2L2
TMEM106B
THUMPD1
LRRD1
GGA1
CC2D2B
RHBDD1
CCDC138
NTSR2
ATP5F1E
CTHRC1
DPF2
CFAP206
EXOC6B
UGT8
EDNRB
CXCL6
CLVS2
GRIA4
HMGCLL1
NRG3
FAM114A1
TRPA1
PRSS38
B4GALT7
SRSF7
SMG7
MEMO1
FAM160B1
ZNF670
TMEM202
CYP51A1
RPL6
UBE2Q1
PTPN11
GABPB1
IMPACT
CBR3
FAM161B
COQ6
SEC24B
SMC3
GTF2E2
PCDHB3
TTC12
TRIL
CCDC59
ZNF32
CCDC88A
RPL5
ANKRD36C
RTP3
LRTM2
SLC25A32
DCAF13
BTRC
ANTXR2
RAB3IP
ZFYVE9
SYS1
TMEM267
GMFB
SLC36A1
MRPS30
SLC38A1
STXBP5L
STRN3
AP4S1
P3H1
DIPK2A
B3GALNT1
ADRB1
GAGE12H
EXOC2
TRAM2
SEC31A
ZBTB6
RBM5
NOC3L
AMZ2
THAP9
SLC35F5
ZNF594
DNAH14
BBS5
RALGAPA1
FAM185A
MINDY2
NUP58
ISCA1
MRS2
EIF3A
ERV3-1-ZNF117
ERV3-1
SLC46A3
BCL2
CAVIN3
PLPPR5
KIF2C
ELP1
ABITRAM
ZNF419
SLC26A4
RDH16
AGPS
CBY3
CCDC112
WASHC4
FANCF
QKI
PCDHA3
PCDHA2
KLHL14
EIF2D
MAN2C1
ABCA3
CGGBP1
ZFP91
LPXN
LUC7L3
SUCLG2
SLAIN2
ST8SIA4
ZNF654
MED17
PRR5L
ZNF229
HORMAD2
OR10AC1
SLC24A1
INTS14
BMS1
TMBIM4
METTL9
DDX1
TMEM65
HDAC2
TCF25
ATP6V0D1
AGRP
YWHAE
PPP1R12B
FER
CCPG1
C15orf65
STAMBPL1
C3orf33
USP47
AGL
KBTBD6
GPR37
RPP25
MGA
ARHGAP31
PXYLP1
ALMS1
PTPN1
CHSY3
NSMAF
SVEP1
ENOX1
SEMA6D
AMER2
ARPP21
MB21D2
PDE11A
TGFBR2
MTR
TVP23B
CFAP20
TATDN1
NDUFB9
ZC3H14
PPP2R5A
TOE1
MUTYH
PDGFD
TP53BP2
MINPP1
ERMP1
ICE2
CAPN7
TRIM44
PTBP3
INSIG1
ARFGAP3
PTDSS1
MTERF3
KLF11
PRIM2
HSPE1-MOB4
HSPE1
HSPD1
KCNH1
WDR47
EFCAB13
GPR180
PLPP1
CCDC126
PEX7
JAK2
ZNF655
UGP2
PCDHGB1
PCDHGA3
GUCY1A2
LY75-CD302
LY75
SELENOH
ADNP
ZNF512B
NMRAL1
HMOX2
CCDC149
NFYC
NLE1
SPECC1
C2
CYP2R1
NXPE3
MRGPRX3
PLD1
FZD6
SIGMAR1
MAP3K1
MTARC2
MOXD1
PAXBP1
TSEN15
SDHAF3
STK19
DXO
TTC14
CNIH1
DYNLRB2
ZCWPW2
AZI2
ERI1
TFAM
TTC37
ARSK
FAN1
EPHA3
NKIRAS1
MANF
PROS1
ALG9
IFNAR1
PRKACB
LOC643802
SNX9
RICTOR
FAM174A
C2orf69
KTI12
CTBS
ZSCAN4
EIF3B
ATP7B
ALG11
MTMR2
CHMP2B
NR1D2
FANCA
KDR
NASP
PIFO
SNCA
PLSCR1
LRRCC1
PCLO
TBC1D7-LOC100130357
TBC1D7
PRDM5
DEPDC7
DNER
SOWAHC
SEPTIN10
PCDHB9
QRFPR
TRPC3
FAM237B
B3GALT1
FBLL1
CGAS
DNAJC25-GNG10
DNAJC25
KMT2D
MRPL58
PDE4D
ZNHIT3
PSMD14
STARD4
NCAPG
CDC25B
HSD17B12
RMI1
HNRNPK
TMEM30B
HSPA5
KIFBP
CENPB
CDC27
GRIA2
C11orf97
LHFPL4
SPEF1
CFAP91
PCDHA11
TRIP4
C16orf54
TRAM1
MRPL39
INTS2
INO80D
DIDO1
SPNS1
GID8
ZNF621
POMZP3
GHITM
PPT1
MYBL1
ZNF443
TMEM251
MOAP1
SAMD3
ITGB8
PHLPP1
PCDHGA4
MOV10
TMEM200A
GRB14
GTPBP6
DEGS2
WDR11
SPAAR
TPR
ODR4
APRT
FBXO7