ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX065546 | 293
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◣ SRX065546: 293

◢ SRX065547: 293

◢ SRX10976388: 293

◢ SRX10976389: 293

◢ SRX150671: 293

◢ SRX17826856: 293

◢ SRX17826857: 293

◢ SRX17826858: 293

◢ SRX17826859: 293

◢ SRX17826860: 293

◢ SRX17826861: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX1799522: CD4+ T cells

◢ SRX1799525: CD4+ T cells

◢ SRX1799528: CD4+ T cells

◢ SRX1799531: CD4+ T cells

◢ SRX671999: ES cells

◢ SRX672001: ES cells

◢ SRX672002: ES cells

◢ SRX9823127: GM12878

◢ SRX9823128: GM12878

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX11220464: HT-29

◢ SRX11220465: HT-29

◢ SRX11220466: HT-29

◢ SRX1925740: iPSC derived neural cells

◢ DRX402530: K-562

◢ DRX402531: K-562

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX5457586: K-562

◢ SRX5457587: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX12813813: MCF-7

◢ SRX12813814: MCF-7

◢ SRX1497516: MCF-7

◢ SRX7030916: MCF-7

◢ SRX7030917: MCF-7

◢ SRX7030918: MCF-7

◢ SRX7030919: MCF-7

◢ DRX402534: MYL

◢ DRX402535: MYL

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

KCNJ15
SMCO1
GTPBP6
BSDC1
ITGB3BP
EFCAB7
APOA1
C19orf18
AADACL4
DEGS2
YPEL3
TBX6
KRBA1
UBE2F
CBX1
ZFP30
MTRNR2L8
OPRL1
LKAAEAR1
RABGAP1
STC1
TMEM89
RABGAP1L
ZNF829
ZNF568
DISP1
MAPRE2
ZNF32
ZNF572
LCN8
GBA
DNAJC25-GNG10
DNAJC25
PDE11A
ZNF623
SAMD4B
PTDSS2
ANO9
COMMD2
KRTAP5-1
PRSS38
MTF2
COL23A1
SF3A3
YWHAQ
DUSP6
DHRS2
RBBP5
RNF187
TMEM229B
NUF2
COX16
CANT1
DBNDD2
COL18A1
MROH7
UTP3
CLTB
TBC1D19
ZNF292
CFHR4
TMEM132A
GALNT1
ATP5MC2
TMEM41A
ZNF566
ZSCAN22
CRYAA
CRYAA2
MMEL1
RPS7
TRMT5
SLC38A6
GCNT7
FAM209A
TOMM20
PRRT1B
IGFALS
ACTL8
ANP32D
SOD2
WTAP
TRIP4
GTF2H4
HTR5A
RNF125
RWDD1
CCDC174
SSBP1
ZNF772
MAN2A1
EPHA3
TSFM
GPRC5C
TTI2
ATP1A1
RERE
CAT
CEP85L
SELENOH
NEMF
SLC1A7
NDUFB3
FAM126B
SLC24A1
INTS14
MED23
ZNF570
ZNF569
CWC25
MRPL1
ARHGAP39
GLIPR1L2
MAST4
ZNF117
PEX3
ADAT2
AP3S2
SLC43A2
DPYSL2
PDE1A
PNMA2
BMS1
GTF2H2C_2
GTF2H2C
GALNTL5
SLC45A4
BRAP
ACAD10
LARP1
LRCOL1
TIGD2
TTC26
TTLL1
PAXBP1
MNAT1
ZBED9
MLPH
DMAP1
MTR
FBXW7
ZNF790
YJU2
OSGIN1
PPRC1
TMEM242
CDC5L
PNPLA7
RAB18
MAMDC2
TXLNB
SUMO3
JMJD1C
MMACHC
CCDC163
NR1H3
ACP2
LRRC49
THAP10
FAM184A
RBBP9
FGFBP3
SNRPE
FAM13A
C2orf88
CFAP298-TCP10L
CFAP298
SMG7
PDCD6IP
NDUFS7
KDM3A
DNAJB12
SIKE1
CCDC130
TTC32
TDP2
ACOT13
HDAC2
TMEM14C
FRA10AC1
PAFAH2
RAB30
PPIH
BANP
MRPS18C
HELQ
RAB5IF
GCGR
TMEM44
APRT
ERN2
TATDN2
TLR2
NME1-NME2
NME1
RNF217
NEU1
ZNF226
ZMPSTE24
CCDC59
MRPL48
CALCRL
CHCHD6
FAIM
SKP2
LMBRD2
TFPT
PRPF31
TARS3
IARS1
REEP3
PDGFD
EIF2D
SLC33A1
GABPB2
TMEM208
LRRC29
RUNDC3B
MTRNR2L2
MSH3
DHFR
ZNF391
PARK7
RANBP2
NUP155
RCAN1
POLR3B
CD14
POLDIP3
LRFN3
SLITRK5
TMEM38A
SMIM7
LURAP1L
RPL27
ZNF571
ZNF540
POMGNT1
LURAP1
PUS10
PEX13
KANSL3
FER1L5
RBM45
ZNF300
RTTN
TPM4
PNPO
SPANXC
DEK
MRPS14
HAX1
CCDC107
ZNF350
TRMO
EXTL2
STAT3
NECAP2
BORCS6
LIMK1
ZNF687
SYNPO2
WDR11
MRPS23
SMIM13
CNN2
TMEM259
CTAG1B
CTAG1A
RPS29
TACO1
SPANXB1
GORASP2
SAR1B
SMIM31
PKIB
SERINC1
GALK2
CCNC
SNRPD1
PARP2
COPS2
ATP6V0E2
TMEM43
CHCHD4
RPS3A
ZNF527
DCP1A
BAIAP2
TEFM
ZNF165
GOSR1
RPL7A
MED22
SURF2
SURF1
HEXA
STOML2
RPA2
ZNF354A
ZBTB8OS
RBBP4
FAM199X
GTPBP3
ANO8
NCOA7
TIGD1
EIF4E2
RIF1
ZNF791
ZNF490
MYO1H
RPS14
RPL5
SAMD1
SLC35B4
TTLL12
EPB41
MOB4
AMD1
CDK19
SGMS2
TBL1X
EP400
SLC3A2
VPS45
FAM174A
REXO4
ADAMTS13
DCT
CUL5
PIGC
RRP1
ZNF20
ZNF324B
STX16
NME4
RPS13
BORCS7
ECHDC1
SLAIN1
ZNF285
SULT1C2
AURKAIP1
DCLRE1B
AP4B1
INTS2
CCNL1
ARHGEF16
DSTYK
EPRS1
CLPTM1
EFHD1
SNCG
MMRN2
MRPL40
HIRA
NUP54
PIH1D2
NKAPD1
NUP107
SLC25A16
MSRA
LRP6
SF3B5
STX18
DRG2
REN
MIER1
FAM13B
DNAI4
THEM4
EIF3F
POLG
COX7A2
SLC35A3
IL36RN
IL36B
MRS2
LUC7L2
FMC1-LUC7L2
FMC1
SDR42E1
ZNF385A
POLR1F
EXO1
ST6GALNAC6
RPL37
ZNF383
PCDH15
NOS3
NOP16
HIGD2A
SPATA18
PPIP5K2
GIN1
ZNF841
COPS4
MITD1
CDC73
NBPF1
HECTD1
NRL
DCAF11
IRAK2
ZSCAN30
KRR1
ZMYND8
TOGARAM1
KLHL28
SARS2
MRPS12
CLDN16
TMEM107
DYNLRB2
TTC3
FBXO44
FBXO2
FDPS
ACTRT2
TXNRD2
APOBEC3B
WDR36
TGFBR2
TAF12
GPR137
TRIM46
KRTCAP2
SUPT3H
N6AMT1
GOLPH3L
ALG10
KRTAP10-9
MTMR9
CHEK1
CNPY1
MRPS33
RRN3
MFSD8
ABHD18
SPRR2F
HIGD2B
BBS4
HAPLN2
PXMP2
POLE
OSGEP
APEX1
CDKL2
ACYP2
GSTA4
CDK5RAP1
PPP1R11
SLC2A7
NOL12
RPS12
PPOX
DAXX
AFG1L
GPR89A
CCDC97
LGR5
OAZ3
ATG5
DDX41
STXBP3
MRPL9
TRMT11
LAMTOR5
CCDC120
PPIG
NARF
CYBC1
PDCD7
TPR
ODR4
GRPEL2
SLTM
GABPA
ATP5PF
LRRC59
NMRAL1
HMOX2
UBOX5
FASTKD5
TMEM106B
CCDC33
SPG7
ZNF793
ZNF561
PHIP
SRP9
ITFG2
PRDM1
HIPK1
FOXP1
FOXO3B
GPN2
METTL9
DDX46
TMEM72
CSNK1E
GABRR2
ZNF134
IPO4
ADNP
TNPO3
ABCB10
P2RX6
POLR3G
MBLAC2
ZNF56
UBR2
PNISR
H2BU1
H2AW
SUPT7L
SLC4A1AP
CCDC200
LOC102724265
LPIN1
PES1
ZNF846
ZNF501
DCP1B
MICU2
LOC100129484
BRF2
WBP1
INO80B
SEL1L
HEATR1
TCTE3
ERMARD
B4GALNT2
DCAF8
CLN5
TSTD3
SNX14
SYNCRIP
SYT1
OR4K17
RAB37
WDR74
TSEN15
ARID1A
ATF7IP
TRDMT1
PLS1
SRP54
SLC2A4
SLC25A21
HMGB1
USPL1
ZSCAN31
C3orf14
ZSCAN25
GOLGA5
HBS1L
ZKSCAN3
EIF3D
ELFN2
ADCY10
MTIF2
DHX16
ALG14
ALDH9A1
TMEM116
ERP29
PSMD11
NUP205
CNIH4
VPS26C
BAG6
APOM
SLC30A5
SULT1C3
MAD1L1
IST1
CPPED1
ATG4C
ABCA3
RIMBP3C
RIMBP3B
SLC25A53
TXN2
VPS35L
ZCWPW2
AZI2
KLHL32
IRAK1BP1
WBP11
C12orf60
DPYSL3
CALD1
C8orf37
TIAM1
DEDD
CRNKL1
CFAP61
CYCS
CHD1
TMEM222
ZNF783
PPDPF
CYB5R4
UFL1
MRPL24
ANKRD36B
INPP4B
SPON2
AQP4
DHTKD1
CCDC115
RSL24D1
ZNF335
BOD1L1
H4C15
H4C14
ASCC1
ANAPC16
SLC17A5
SMAD3
DNAJC19
C11orf65
ENG
MED18
GTF2B
TAF13
IRF9
DUSP12
ZKSCAN8
GYPC
VPS25
NMT2
SFXN2
ARL3
EXOSC10
MRPS31
TRUB2
COQ4
FAM228B
SF3B6
TPK1
ARID3B
DNAJC24
DCDC1
MRPL45
GTPBP10
TAF3
CCDC124
RPAP2
GLMN
RUFY4
ACOX3
TRMT44
VTA1
NMBR
SNIP1
DNALI1
CCNI
SEC23B
TMA16
DHRS13
THG1L
RAD54L2
FAM234A
UBE2L3
UBE3B
IPP
COMMD6
UCHL3
PLCH1
FBXL19
INSYN2B
SULF1
SMPDL3A
PLD4
PABPN1
NLGN1
PUM1
CEP85
WDR55
TMBIM4
ZNF518A
RPS26
OSGEPL1
BCKDHB
TBRG1
MED11
PARPBP
NUP37
GAR1
IPO7
ZNF345
LSM5
AVL9
ATG101
RALBP1
COG2
ARL14EP
PACSIN2
RNF144B
ZNF408
ARHGAP1
TIPARP
RNF6
CIZ1
AASDH
RFXANK
BORCS8
SAYSD1
ZNF589
KBTBD3
AASDHPPT
PEAK1
HMG20A
JOSD1
GTPBP1
GPATCH4
KLF16
PBX3
C6orf118
GBX1
GPAM
SRSF7
VPS13B
FBXO22
HMGN4
HDAC8
MAST2
WDR62
THAP8
MYO18A
CFAP410
POLR2J3
NSA2
GFM2
OPA1
R3HCC1
CFAP20
ZNF582
ELFN1
WDHD1
SOCS4
ATG9B
ABCB8
ASCC3
CORO2B
TAFA3
PPM1J
ZBTB45
MRPL21
IGHMBP2
HACL1
BTD
EIF3E
PSMD6
QRICH1
C2CD5
CSDE1
TMEM59
MRPS35
TM2D1
FDXACB1
C11orf1
MRAP2
PGM1
RIOK1
CAGE1
INTS5
INO80C
SUGCT
MPLKIP
ACBD6
ZNF3
ZNF461
NUDT15
EIF2S1
ATP6V1D
TMEM138
CYB561A3
CCR7
GMEB2
ATL1
TNFRSF19
RNF207
MZT1
BORA
LRRC10B
DPY19L4
ALKBH3
SAE1
WARS2
MRPL53
LOC100421372
HSPA14
CDNF
C15orf61
TOR1AIP2
TOR1AIP1
ALG10B
MTBP
MRPL13
SESN1
CEP57L1
RPTOR
C17orf50
UGGT1
HMGCR
GPATCH3
SFN
DRG1
PPWD1
CENPK
LCA5
CNIH3
MBOAT4
GTF2H2
SNX17
EIF2B4
TEX50
AARS2
ZNF331
SIRT4
ZDHHC6
VTI1A
RPS18
VPS52
UFC1
STK32C
PDSS2
ESCO1
B3GALT4
SPAG9
RIMBP3
RBM34
SCCPDH
DDX18
NDUFA12
DNAJC16
CASP9
MRPL54
APBA3
ZNF2
CTH
PPP1R9A
SNAP47
JMJD4
TMEM79
SMG5
CCNT1
MSL2
LTA4H
PCNA
MMUT
CENPQ
SUMF1
HMGCLL1
ZNF529
NDUFC2-KCTD14
NDUFC2
LTN1
MTRES1
FITM2
NUDT5
CDC123
TYW3
CRYZ
RCAN2
LTF
C16orf92
SPATA7
SHC3
GASK1A
TMBIM6
RARRES1
PCDH9
ZNF362
TNRC18
ASB13
CYP17A1
PSMD3
SMU1
CACNG1
EPN1
ZKSCAN2
GCLM
PAAF1
COA4
SETDB1
GSR
PSMC4
FAM71E1
EMC10
RCCD1
CDK7
CYP27B1
METTL1
EEF1AKMT3
SULT1C4
DYNC2LI1
RNF182
FANCI
UQCC1
MDM4
WDR5B
NEK2
ZNF184
FBXL17
TMEM33
DCUN1D5
PPIL3
NIF3L1
GCFC2
ZNF839
CNTRL
BCL9
RBM7
C11orf71
C5
SYMPK
FOXA3
LYRM2
EIF2S3
ZBTB8B
SEM1
TMEM62
FAM133B
MRPL3
HIP1
IPO13
ARHGAP19
SLC39A6
PIKFYVE
C15orf40
ATP5MF-PTCD1
ATP5MF
WDR4
WNK1
PLAC8
BBS5
KPNA6
DPH6
LMO7
ST6GALNAC2
ZNF577
HERPUD2
KDM1A
HSD17B6
TEX46
PLEKHA3
FKBP7
RAG2
IFTAP
MDP1
CHMP4A
CATSPERE
APC
TSG101
MLIP
RBM33
YTHDC2
COPS7B
H4C8
NDUFS3
KBTBD4
FBXO38
NSUN4
CUL2
MRPL42
TTC14
ETFDH
C4orf46
COX18
KIF15
KIAA1143
PYCR2
NOLC1
IMPACT
NDUFB2
NOXO1
GFER
COX14
ARHGEF4
BCAR3
C18orf21
PPP4R3B
SMAP2
PPA2
SNX5
MGME1
MRPS16
AKR1B1
IFNAR1
SLC25A19
DUS3L
TNFRSF10D
FAM161A
TXLNG