ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX702142 | hESC HUES64
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX10976388: 293

◢ SRX10976389: 293

◢ SRX150671: 293

◢ SRX17826856: 293

◢ SRX17826857: 293

◢ SRX17826858: 293

◢ SRX17826859: 293

◢ SRX17826860: 293

◢ SRX17826861: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX1799522: CD4+ T cells

◢ SRX1799525: CD4+ T cells

◢ SRX1799528: CD4+ T cells

◢ SRX1799531: CD4+ T cells

◢ SRX671999: ES cells

◢ SRX672001: ES cells

◢ SRX672002: ES cells

◢ SRX9823127: GM12878

◢ SRX9823128: GM12878

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◣ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX11220464: HT-29

◢ SRX11220465: HT-29

◢ SRX11220466: HT-29

◢ SRX1925740: iPSC derived neural cells

◢ DRX402530: K-562

◢ DRX402531: K-562

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX5457586: K-562

◢ SRX5457587: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX12813813: MCF-7

◢ SRX12813814: MCF-7

◢ SRX1497516: MCF-7

◢ SRX7030916: MCF-7

◢ SRX7030917: MCF-7

◢ SRX7030918: MCF-7

◢ SRX7030919: MCF-7

◢ DRX402534: MYL

◢ DRX402535: MYL

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

MAMDC2
FRG2C
FAM153B
SULT1C3
AADACL4
SMCO1
FRG2
THEM4
CFHR4
DUX4
IRAK2
TMEM229B
SNCG
MMRN2
KCNJ15
MAST4
CNOT3
OR2T1
BCR
KRBA1
GCNT7
FAM209A
YPEL3
TATDN2
MTRNR2L1
COL23A1
BSDC1
UBE2F
MTRNR2L2
MSH3
DHFR
MTRNR2L8
MBOAT4
TMEM89
EXTL2
GTPBP6
ZNF562
DUSP6
ITGB3BP
EFCAB7
DEGS2
GBA
DBNDD2
PDE11A
GORASP2
CTAG1B
CTAG1A
FAM184A
SARS2
MRPS12
ST20-MTHFS
RABGAP1
FEM1C
CBX1
ZNF572
COL18A1
TXNRD2
APOA1
TBX6
FAM227B
DTWD1
NUF2
APOBEC3B
PAXBP1
MTF2
RBBP5
ZNF324B
RPS7
ARHGAP39
BCAR3
SSBP1
LEP
DMAP1
ZNF761
AURKAIP1
TLR2
SUMO3
SAMD4B
LUC7L2
FMC1-LUC7L2
FMC1
OR4K17
C2orf88
MON2
PRRT1B
ANP32D
SF3A3
PRSS38
PUM1
STX16
SCCPDH
ACYP2
GSTM5
RFC1
GPRC5C
FAAH
NDUFS7
MED23
SDR42E1
RBPJ
ST6GALNAC6
CEP85
SLC1A7
ACAA2
BAAT
NME1-NME2
NME1
IGFALS
COX16
ADCY10
DCP1A
CCDC130
IL21R
RPS29
PEX3
ADAT2
BANP
SLC27A5
YWHAQ
ZNF117
TTLL12
SEM1
TMEM41A
ZNF623
INTS12
GSTCD
RAB37
TMEM242
EIF2D
CALCB
RPL27
SATB1
CEP72
PPIG
JMJD1C
RABGAP1L
RBM33
ZMPSTE24
PLEC
ZNFX1
NDUFB3
FAM126B
TMEM70
ELOC
FRA10AC1
MRPL44
ZNF577
IFT88
IL36A
GPD1L
NOS3
KMT2A
GDPGP1
CIB1
TTC32
POLE4
MROH7
C19orf18
CYP17A1
DCAF10
HMGB1
NARF
CALD1
DSTYK
NPAS4
TBC1D19
HERPUD2
MAPRE2
ACOX3
SELENOH
ZNF426
USPL1
TMEM14C
GTF2H2C_2
ZFP30
TMEM43
CHCHD4
SKP2
LMBRD2
TRIP4
GTF2H2
SLC24A1
INTS14
POLR2J3
APOL4
ZNF317
CLK4
TRMT44
STX18
GTF2H2C
ENG
RPL37
TOP3B
DPY19L4
DRG2
GALNT1
DNAJC25-GNG10
DNAJC25
PRELID3B
PNPLA7
ATP1A1
PAFAH2
COMMD2
ADI1
SLC33A1
ZSCAN31
ZNF561
POLR3B
CYBC1
TOR1AIP2
TOR1AIP1
TMEM62
RBBP9
NME4
KDM3A
ZNF792
LMLN2
TFPT
PRPF31
RERE
RPS14
ZNF408
ARHGAP1
CAT
MRPS31
TATDN3
NSL1
SMARCD2
YTHDC2
UTP3
CLDN16
PPIP5K2
LIPA
GIN1
CCDC59
ZNF134
PSEN1
PDCD7
ALG10B
PIK3R1
NSFL1C
IPO4
RAD54L2
SLC44A1
FRG1
DNAJB12
SLC25A51
TIGD2
GTF3C3
REEP3
TDP2
ACOT13
EIF3F
MAD1L1
TMEM68
TGS1
THAP11
NUTF2
VTA1
NMBR
SFT2D3
SUPT7L
SLC4A1AP
RPL11
GSTA4
GTF2H4
ANKRD54
PARP15
LSG1
EPS8
INTS5
AUH
YJU2
EIF3L
CENPT
MRPL40
HIRA
RTTN
BAIAP2
ACTL8
FBXO31
ZNF32
AP3S2
YY1AP1
DAP3
SMG8
STAT3
CATIP
REXO4
ADAMTS13
GLO1
ZNF341
MSRA
BMS1
CDK5RAP1
MMACHC
CCDC163
WDR36
TMEM44
PPP6R1
HTR5A
KDM1A
GCNT3
ITGA4
TEFM
LCN8
SNIP1
DNALI1
THOC5
CAMK1D
FGD3
INO80C
RNF187
DRAP1
C11orf68
EIF1AD
BANF1
SNAP47
TACO1
ZNF841
ESR2
PRIM2
ORC4
MBD5
REN
ZNF829
ZNF568
PPP1R11
GINS1
ZBTB45
SCAND1
COPS7B
DEK
SUPT6H
SDF2
CCDC200
MRPL21
IGHMBP2
SCARF1
SCMH1
JMJD4
WDR74
C3orf14
PSMF1
KANSL3
FER1L5
SLC2A7
ILF2
SLC41A3
ATP5MC2
USP30
LARP1
SGCE
PEG10
SNX17
EIF2B4
FAM207A
TTC26
EFCAB10
TRUB2
COQ4
POLR3E
TMEM222
RILP
HSD17B6
NEMF
WDR11
SAR1B
CCSER2
SLC29A2
DUS1L
FAM133B
FGFBP3
CCDC97
ATR
ZNF571
ZNF540
NBN
ZNF391
SPAAR
RMND1
ARMT1
TSEN15
C1orf167
AKAP10
MTIF2
GALK2
MOB4
MRPL1
BNIP1
DPP9
C17orf75
IST1
WDR43
METTL8
DCAF17
GTPBP3
ANO8
LGR5
MRPS18C
HELQ
CD47
SMIM31
MMP7
KLHL20
ATP9B
C1GALT1C1L
ZBTB40
ZNF226
TUT1
DUSP16
GABPB2
ARID1A
TMEM79
SMG5
COPS4
SCNM1
LYSMD1
NOTCH2NLC
NFE2L3
CANT1
HSPE1-MOB4
HSPE1
HSPD1
MRPS23
SAMD4A
NCOA7
GASK1A
TEX46
TTI2
NSA2
GFM2
OTUD7A
CCNC
DDX18
WDR55
C16orf54
ANXA2
COLEC11
TMX2
MED19
OAZ3
CFAP298-TCP10L
CFAP298
ATF7IP
MRPL48
CTNNB1
HYAL1
RUVBL1
KIAA1549
NRBP2
ZNF566
FASTKD1
GTF3C5
SNRPB
NDUFAF1
HACL1
BTD
POLG
ZSCAN25
CPPED1
RAB30
MLEC
EXO5
CASP4
LZTR1
RTCA
SEC13
STAU1
CLTB
MNAT1
PIN4
NUP54
MAN2C1
MITD1
C8orf37
TTC4
SERHL2
TPR
ODR4
AFAP1L1
ZNF609
LSS
NR1H3
ACP2
FBXL12
SLC45A4
ZCCHC4
ANK3
CLDN4
INPP5F
TMEM101
H4C8
RMDN2
CCNI
SERPINB1
OPA1
NDUFS3
KBTBD4
CD14
PCP4L1
RPS20
ADPRS
ADNP
KLRD1
PDE6D
CCAR2
C8orf58
MTBP
MRPL13
CHD1L
GOLGA5
B4GALT7
TLNRD1
PRPF18
GMPS
COX7A2
SUGCT
MPLKIP
TEKT2
NOP16
HIGD2A
C18orf21
TMBIM4
PSRC1
EPRS1
GRPEL2
TPM1
SLTM
BRF2
GPAM
FAM228B
FABP6
BRWD1
CCDC150
MED18
SNRPD1
RNASET2
REM1
DEFB124
TIPARP
SLC35E2A
DCLRE1B
AP4B1
IAH1
TSFM
DGKZ
ING2
SDHAF3
NAA20
PARP2
METTL9
SRSF7
ALKBH3
SLC35A3
LOC102724265
SF3B6
PIGW
MYO19
SLC39A13
CRKL
HNRNPD
TRIM38
ADRM1
PHIP
MATK
ZNF398
CASC3
KRTAP10-8
ZNF772
CCNT1
COPS2
SLC38A9
HUS1
ADAR
RANBP1
UBLCP1
EIF3E
ZNF292
TPK1
MRPL34
TIMM22
SESN1
PSMD3
POLR1H
NCBP3
NECAP2
CLUAP1
SMU1
AMD1
TTLL1
LRIG2
CDC73
TRMT2A
VIRMA
MRPL3
SNRPB2
RAB18
TGFBR2
LRP6
PRDX3
ALG10
PLEKHM3
N4BP2L2
RPL26L1
LRRC37A3
TEX50
CDYL
FAM98B
CADM2
ZNF280D
SEC23B
AGK
PRRC1
GFI1B
MTOR
LONRF2
SMG7
FBXO38
TTC13
CCR6
SEC22B
SCGB1C1
CALCRL
LNPEP
MTR
PUS10
PEX13
WWTR1
CENPV
TIGD1
EIF4E2
WBP1
MAGOH
INO80B
KAT6A
RNF125
SACM1L
DLAT
ZNF605
NFAT5
TMED1
R3HCC1
ZNF165
CCDC88A
RBM45
ZSCAN30
PIP4P2
AARS2
SNRPE
COA6
CEP57L1
NBPF1
CDK19
PDCD6IP
LSM5
CRYAA
CRYAA2
ZNF554
FOXN1
CASP10
DHRS2
PIH1D2
NKAPD1
ANKRD40
RPL5
TARS3
PPP5D1
CALM3
MRPS14
PPIAL4F
PPIAL4E
PPIAL4D
LPIN1
TRMT5
SLC38A6
TSGA10
C2orf15
CLTC
STOML2
TIAM1
RPS15
ZNF438
HAX1
KMT2D
AVL9
ACSM2B
ZSCAN22
SRRM3
MYCBP2
SNRPD3
GUCD1
RNF6
PSMD6
DPP8
AAR2
SUGT1
FAM234A
DDX1
GABPA
ATP5PF
VPS13B
SPSB1
MSL2
TEX9
RFX7
PRKAG2
CEP85L
SRP9
CASS4
PPP2R5B
PRMT5
POM121L2
ZNF76
SMIM13
KRR1
THAP6
TTC5
U2SURP
NMNAT1
LZIC
H4C12
MRPL16
C10orf88
WWOX
CLUL1
ZNF383
MFF
TMEM42
CEP120
ITFG2
YTHDF2
PRKAB2
TRAM1
CDIPT
SLC35E2B
MAPK1IP1L
HLA-E
TBCK
AIMP1
PRPSAP1
STK19
DXO
CREM
MRPL39
NOXA1
ITGAL
RBM28
RPS3A
CBWD5
EPB41
SEL1L
DHX16
ZZZ3
RCAN1
ZNF512B
PCBP2
NOTCH2NLA
MRPS33
HIP1
GSPT1
ERCC6L2
GCNT1
WDFY1
SGMS2
TBL1X
PTPN4
SLC35B1
CNN2
NUP107
GLIPR1L2
LRRC59
ATG101
ZNF385A
RRN3
ZNF439
TMEM259
ZNF546
SLC35G5
MRPL19
PPP1R3B
SDCCAG8
CEP170
FBXO22
TRDMT1
PDRG1
EEA1
LTA4H
ARRDC2
ZNF425
SEC14L1
H4C11
NSUN4
NDFIP1
RPS19
HEATR4
TFPI
ASF1A
PFKM
MAP1LC3B2
DHTKD1
MEMO1
SOD2
RALBP1
TULP4
GNB2
ZNF518A
HNRNPA1L2
DNAJC11
SAE1
RABGGTA
STX6
KNL1
CDK12
CYB561D1
XKR7
RESF1
HEXIM1
METAP1
KIF2C
CELF2
ELAVL3
PES1
OR2AP1
ARMH3
MED4
ZNF846
PHF21A
IFI44
CNOT11
RTN4
TSC1
PAK1IP1
INTS2
C6orf52
CYB5A
ACBD6
SET
MMEL1
STC1
NUDT9
SEC14L5
ATG4C
CCDC115
ZNF770
TMEM65
MTMR6
FAM13A
C11orf49
SLC39A3
LMBR1L
UGCG
RRP15
DCT
TLR1
ATG5
ABCC10
FLT3LG
TM9SF4
EIF2B3
TVP23B
CUL2
ZER1
RIF1
NT5DC1
DISP1
SMIM12
POLR2E
LRRC61
HEATR1
QRICH1
PRAME
ZNF3
YBEY
RUNX2
MCM3AP
C2CD5
MRPS15
RPS26
WDR70
POLR3GL
ANKRD34A
FAIM
ATP5MC3
RPL38
INTS4
P3H4
FKBP10
RAB5C
CIZ1
ATXN7L2
CRBN
IQSEC3
FOXJ3
CBR1
ALG14
GARS1
PTGES2
INKA2
DDX20
TMBIM1
CNGA1
SETD1A
ZNF527
PRRG2
NOSIP
COG2
ZNF296
GEMIN7
GTF2A1L
ABLIM1
VWA8
IL36RN
IL36B
CACNG1
NNT
TMBIM6
CCDC174
TTC23L
PTPRCAP
SHF
ATAD2
ACTR3C
CD248
ZMYM5
CCDC83
TPM3
UBE2L3
ASNS
ABCG1
TMA16
PRSS22
RAP2C
CBWD3
ARID3B
MEX3C
TXLNB
EPN1
PPIL3
NIF3L1
TTC38
PKDREJ
FAM160B1
DHRS4
TCTN3
ZNF583
IQGAP2
CFAP20
NMRAL1
HMOX2
DDX46
CHMP7
TRMT61B
SREK1IP1
CWC27
RAD52
NR1H2
RBL1
RSAD1
MAN2A1
PPIH
ZNF501
METTL26
TSPAN10
NPLOC4
SLC30A6
HIBADH
CLEC12A
KCTD5
SENP1
DNAJB13
ANKRD36
KDM3B
ZNF331
SCGB1C2
SIRT4
RBIS
PET117
KAT14
CCDC107
RGPD2
RGPD1
RWDD1
IPO13
VN1R4
DNAJC24
DCDC1
WTAP
GFM1
PSMB7
NEK4
TNPO3
CSTF2T
TMEM167B
SH2B1
HNRNPH1
GATAD1
DGKQ
ZNF827
PHB