ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX10976389 | 293
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX10976388: 293

◣ SRX10976389: 293

◢ SRX150671: 293

◢ SRX16676305: 293

◢ SRX16676306: 293

◢ SRX17826856: 293

◢ SRX17826857: 293

◢ SRX17826858: 293

◢ SRX17826859: 293

◢ SRX17826860: 293

◢ SRX17826861: 293

◢ SRX22117740: 293

◢ SRX22117741: 293

◢ SRX22117742: 293

◢ SRX22117743: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX1799522: CD4+ T cells

◢ SRX1799525: CD4+ T cells

◢ SRX1799528: CD4+ T cells

◢ SRX1799531: CD4+ T cells

◢ SRX671999: ES cells

◢ SRX672001: ES cells

◢ SRX672002: ES cells

◢ SRX9823127: GM12878

◢ SRX9823128: GM12878

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX11220464: HT-29

◢ SRX11220465: HT-29

◢ SRX11220466: HT-29

◢ SRX9977682: HUVEC

◢ SRX1925740: iPSC derived neural cells

◢ DRX402530: K-562

◢ DRX402531: K-562

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX5457586: K-562

◢ SRX5457587: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX12813813: MCF-7

◢ SRX12813814: MCF-7

◢ SRX1497516: MCF-7

◢ SRX7030916: MCF-7

◢ SRX7030917: MCF-7

◢ SRX7030918: MCF-7

◢ SRX7030919: MCF-7

◢ DRX402534: MYL

◢ DRX402535: MYL

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

GTPBP6
MAPRE2
ITGB3BP
EFCAB7
MTRNR2L8
AADACL4
COL4A5
COL4A6
C19orf18
ZNF408
ARHGAP1
SUPT7L
SLC4A1AP
BSDC1
KCNJ15
GABPB2
IRF6
KDM3A
GALNT1
ATF7IP
MTRNR2L2
MSH3
DHFR
YPEL3
TBX6
RBM33
CDIPT
KRBA1
PAXBP1
LGALS3BP
ZNF571
ZNF540
UBB
TMEM79
SMG5
ARID1A
RPS26
PPIL3
NIF3L1
TCTEX1D4
BTBD19
AHCYL1
HDAC8
CALCRL
PIH1D2
NKAPD1
THG1L
RPH3AL
CANT1
CELA2A
KAZN
CLPTM1
GTPBP3
ANO8
CCNI
RPL27
PRPSAP1
CCL20
CELF1
ARTN
SSBP1
RHOQ
ATP6V1E2
PPP6R1
ZDHHC6
VTI1A
ZNF577
INTS5
PLA2G2A
AURKAIP1
MAP3K14
ARHGAP39
RGPD2
RGPD1
SERPIND1
EIF2S1
ATP6V1D
MAST2
POLR3A
RPS24
NOL12
LRIG2
RCAN1
NEK2
SLC39A6
TFPT
PRPF31
HAX1
THEM4
ABRACL
KDM5C
EVPL
RBBP5
ZNF302
ITFG2
GTF2H4
BCL10
LY6K
MRPS33
PRSS41
CREM
SLC33A1
ARHGEF2
ZNF585B
ELFN2
APOA1
IL17F
DHRS2
TPM3
DUSP6
RABGAP1
ISY1-RAB43
ISY1
RAG2
IFTAP
TMEM242
STK40
GPC6
CDK12
PDE12
ZNF383
RAD51AP1
C12orf4
AKIRIN1
FAAP20
IGFL4
ERICH4
DMAC2
SLFN12
COPS4
SELENOH
CNGA1
STX1A
TTC26
CEP120
LACTBL1
TNPO3
ZW10
NDUFB3
FAM126B
ARMCX5-GPRASP2
ARMCX5
RERE
MMACHC
CCDC163
NEMF
LIMK1
PDE4DIP
ZNF790
MTF2
NBPF1
STC1
ARID3B
COX7A2
TRIM5
TRIM22
SNIP1
DNALI1
C1orf174
TBL1X
INTS2
CGGBP1
C3orf38
ZNF750
SF3A3
HEMK1
C3orf18
NCOA7
CCDC130
C3AR1
WDR83OS
WDR83
MAN2B1
COL18A1
MROH7
DNAJC16
CASP9
ZNF56
BAIAP2
GLIPR1L2
KRT19
YWHAQ
SNRPD1
UBE3B
UQCRC2
SIRT3
PSMD13
ZNF572
COIL
DYNLRB2
AGTPBP1
ILF2
PACSIN2
AKR1A1
COX16
CHMP7
RBM25
TRMT11
MRPL54
APBA3
PLEKHG1
LIG3
ZSCAN4
PARP15
AAAS
GBA
SCMH1
EIF3F
AP1G1
ITPR3
RABGAP1L
CD2BP2
TNFRSF1B
TTC39C
IFI6
TYSND1
RMND1
ARMT1
MTR
DDX42
CCDC47
KCNH4
HCRT
RFFL
RNF207
RPL11
SHOC2
BBIP1
OCIAD2
ZNF793
TUFT1
PHF5A
ACO2
NYX
STAT3
MRPL1
ASAP3
ZNF566
EPRS1
RNF125
HEATR1
MIS18BP1
CYB561D1
RPA2
TMEM247
SYT16
FAM184A
ZMPSTE24
LSG1
TRAFD1
NR1I2
TBC1D19
REXO4
ADAMTS13
CD14
ZNF335
DYNC2I2
MICALL1
ZNF461
TM2D1
PLAAT2
CASP10
SNX27
USP9X
CEP162
SMG9
NME1-NME2
NME1
LRP6
ZNF331
PSMB7
TXNRD1
PCNP
JMJD1C
CCNC
LMNA
CDH1
BNIP5
HEBP2
KDM6B
PRRT1B
ZNF623
PPRC1
WSCD1
PSMB5
SH2D5
WDR55
USO1
SUMO3
ZNF226
INKA2
DDX20
PHC2
AIFM1
AMHR2
SPAAR
MTBP
MRPL13
AASDH
EIF5A
SUGP1
MAU2
TIMM10
MED11
SLC25A53
SLCO1A2
SESN1
CEP57L1
B4GALT3
SCARB1
CPN2
ZNRF3
CNN2
TMEM259
RSPH3
NID1
NAV2
NHLH1
SLC41A3
TUT1
SCT
CDHR5
ZBTB40
TPK1
MAMDC2
VPS35L
GNA12
BEST4
TIMM9
KIAA0586
UBQLN1
SLC35A4
APBB3
RCC2
PLK3
TTC31
CCDC142
INPP5A
NFYC
MIDEAS
RCAN2
GCNT7
FAM209A
FNTB
RFXANK
BORCS8
PRKCSH
CCDC151
UFC1
ZRANB2
NOL8
CENPP
FERMT3
ADRA1A
RCN1
CLASP2
KCTD9
CDCA2
XPNPEP3
ST13
JUN
PGLS
ANKRD1
BORCS7
SIN3B
FRRS1
KLK10
TTLL2
PLAU
CRTAM
KLHL34
FEM1C
CCDC97
YTHDF2
SGMS2
FAM89A
EIF2AK3
EIF1AD
BANF1
MED18
TRIM25
TRMO
C6orf118
NDUFS7
ZFP30
CLCN3
CSNK1E
ZNF300
PREPL
CAMKMT
PEAK1
HMG20A
MTHFD1L
RIN2
EXPH5
ELSPBP1
BSPH1
VGLL1
GTF3C3
ZNF518A
ZKSCAN2
NRL
DCAF11
NIP7
COG8
PEF1
ZSCAN22
TRMT1
NACC1
PLS1
FBXO46
SLC39A9
ERH
PXT1
KCTD20
SLITRK5
KMT5C
SH3BP4
DNAJB12
KDM1A
TEX46
CSTF2T
IRF9
C19orf25
CLN3
APOBR
DUSP14
ECPAS
NTN1
TTC9B
PLEKHH2
TCIM
PPIP5K2
GIN1
ZSCAN30
TMEM107
TFB1M
GPX1
MTMR11
CCNY
RETREG2
CNPPD1
NME7
BLZF1
STX12
ZSCAN23
GTF3C5
LZTR1
SIRT4
UIMC1
STAT6
TNFRSF1A
FRA10AC1
MNAT1
PES1
SMIM12
TBCB
POLR2I
OVOL3
RHOD
ZNF165
CMSS1
CARHSP1
KLF6
APOL1
TTLL12
TRUB2
COQ4
UFD1
CDC45
HAPLN2
PSMD3
ALG14
EFHD1
KAT7
DLX4
POLD4
FCRLA
RBMS2
C19orf48
ZNHIT3
ZXDC
PLK2
TIMP4
CCDC74A
CD24
TUBB
MDC1
RGL2
ZNF221
CLASP1
GLCE
CD320
HOXB13
RHOT1
HBS1L
GPATCH3
IPO4
TEFM
SUGCT
MPLKIP
ADAT1
CELF3
PSG9
ISLR
RIIAD1
YJU2
INO80C
SCYL3
CPD
GAL3ST2
CLDN7
ZNF324B
SMG8
PRPF18
TMEM128
ZBTB8OS
RBBP4
MXI1
GAPDH
MYO1B
TRPV2
TIAM1
RBL1
CCNG2
CALM2
OSBPL8
CZIB
ADGRL1
IFI44L
LOC102723360
WDR11
TRAPPC8
HACD2
HSCB
CHEK2
MAN1C1
TMEM89
DMAP1
MSRA
CORO2A
MTUS1
STBD1
SLC1A3
RAI1
PIP5KL1
TM9SF4
TMBIM1
CHPF2
LIMA1
ABCF2
AARSD1
TRIM16L
SULF1
UBE2F
BANP
DLAT
TBC1D22A
ABR
ZNF14
NECAP1
ROCK1
FURIN
NKX3-2
RPS29
ZNF829
ZNF568
CNIH4
ARID5A
DNAL1
F2RL1
C1orf158
FBXO7
KIF20A
BRD8
WASF2
NRDE2
TIAM2
SPR
PDXP
RIPK4
MTRNR2L10
CBR1
CCDC174
DDX41
TXN2
SLC7A11
CACTIN
ZNF24
NHSL1
RUFY4
SULT1C2
VPS13B
NUDT9
CERK
SF3A1
CCDC157
APOL2
CDK14
ATXN7L3B
HSPA5
UTP18
MBTD1
TBC1D1
RASL10B
RTL9
ARHGEF18
SASS6
ANKRD17
C16orf92
CENPA
AKR1D1
IAPP
PDE11A
CALD1
MRPS18C
HELQ
NOP16
HIGD2A
RBM45
ZNF791
ZNF490
ABCD2
RPF1
PIK3CB
MRPS23
CFAP298-TCP10L
CFAP298
TIGD1
EIF4E2
CEP85L
PNISR
MYEOV
CTSB
G2E3
PLEKHG2
LRRFIP1
TEF
CCDC59
MRPL48
CCDC115
ZNF2
GALM
S100A11
GTSF1L
SFXN3
PDZD7
ATP2C1
PDZRN3
TUSC3
ADAMTS16
PEX3
ADAT2
IRF2BP2
MAD2L1BP
TTC14
RPS18
VPS52
POMGNT1
LURAP1
GTPBP2
SMAD3
IGF2R
CPPED1
SFSWAP
PIKFYVE
ZZEF1
CYB5D2
TMOD1
STK32C
EFCAB14
LRRC27
SLC25A44
KRTAP10-9
PIGL
NCOR1
TOMM40
GTF3C6
KIAA0319
ASXL3
CREB3L2
TRIM10
ABI3BP
CALCB
FAM234A
MEGF8
DNAJB4
EHD2
ZNF260
FGD4
SULT1C4
PPARGC1A
PRSS23
AQP12B
DHDDS
FOXP4
USE1
SLC18A1
DUX4
RPS14
CLTC
DHX16
SRSF1
ZFC3H1
THAP2
CYP27B1
METTL1
EEF1AKMT3
CTSK
HTATIP2
LIMCH1
ASB5
GORASP2
UTP3
TAF13
SPRR2F
SECISBP2
BRCA1
ZNF708
GABARAPL2
ADIPOR1
COL21A1
CLCN4
SLC35B1
TMEM69
GPBP1L1
CEP126
ANGPTL5
FAM199X
IFT46
HTR3B
EIF3E
SOD2
IPO13
WTAP
PTDSS2
PPOX
ANO9
MCCC1
DYNC1I2
SNX3
PMF1-BGLAP
PMF1
HIRIP3
PLPP5
PHACTR4
SLFN5
SGSM3
TUBA3D
RPS7
RIF1
RIPPLY3
IFIT3
FBXO16
FZD3
ACOX3
TRMT44
PAFAH2
THOC5
CDYL
NEK4
OPRL1
LKAAEAR1
SCP2
RPL26
FDXACB1
C11orf1
COPS7A
LYPLA2
S100A13
DLGAP4
LRIF1
NAA38
TMEM88
CYB5D1
INSYN2B
S100A1
SEC16B
AKR1B15
PKD1L2
RUVBL1
FAM13A
CCDC107
TES
PEMT
PLCD3
ACBD4
RCC1
MUC1
ARMC1
NEURL4
ZNF576
IRGQ
ALDOA
CDRT1
CLK4
STX18
KANSL3
FER1L5
FBXW7
CD55
ZBTB25
ZBTB1
HAUS6
NAPA
TMCO3
DCUN1D2
AGPS
TANC1
DAPK3
CHRNA9
PDE10A
SULT2A1
EPB41L3
ANK3
ATG4C
UCKL1
DHX32
TCF3
ZNF416
TIMM50
FOXO3B
SPATA1
GNG5
LEPR
ZIK1
UBE2H
GCNT2
CES3
RBM42
CHKA
ARHGAP18
SPON1
LSM5
AVL9
PRKAG2
ATP5MC3
GOSR1
SPHK2
RPL18
FAM83E
CASP8
WDR5B
UBXN7
WDR75
ZNF573
PTPA
CRAT
AMOTL1
ZNF506
WASF1
CDC40
NHS
FHL1
COL23A1
HSD17B6
PSMA1
TAF12
CRTAP
SRSF4
NUDT5
CDC123
TNFAIP3
VPS45
MRPL27
EME1
ARMC7
CFAP43
CHD4
GLI1
ACP3
FUCA1
MAT1A
ZNF317
ZBTB45
MOB4
NR1H3
ACP2
DDX46
ARL14EP
KLF3
AP3B1
TPD52L1
HROB
DNPEP
SLC18B1
PIM1
RPAIN
NUP88
LMO2
BRD4
LOC100509620
DNAJC25-GNG10
DNAJC25
BNIP1
HEXIM1
CACNG1
RIMBP3C
RIMBP3B
TRPC4AP
CRNKL1
CFAP61
PMVK
ZBTB7B
AIP
CSTF3
FAM222B
SLC35E1
CDK5RAP1
TMEM101
YARS2
GADD45A
DGKD
INPP4B
LTBR
GABARAPL1
AP2M1
SCNN1A
KRT34
TMEM222
TMX2
MED19
NDUFS3
KBTBD4
LNPEP
SNRPD3
GUCD1
THOC2
LRRC49
BCL2L13
SPEF2
PDE4B
CDK5RAP2
CCS
CCDC87
UPK3A
SEMA4A
VWA5A
DSC2
NKAIN1
RFTN2
LARP6
SCGB1A1
COMMD2
POLG
TARS3
WARS2
SH3BGRL3
REPS1
AMPD3
EGLN2
WDR89
DOCK3
GP5
HTR3A
LRIG3
ZNFX1
POLR3E
TTI2
PUS10
PEX13
C2CD5
CD248
KLHL41
OSGEPL1
HDLBP
CASP3
USP22
NCF4
PDK2
SBNO1
TRIP10
ANK2
CNPY1
COA3
CNTD1
CHST4
DDX3X
KIF2C
SMARCD1
NUDCD3
SPNS1
ELOVL1
ELFN1
AFTPH
NSUN3
DHFR2
USP54
CHID1
CSF3R
ZNF806
CFP
DTX3
NOS3
MRPS14
RPS19
ZMYM6
TMEM205
CCDC159
MEIG1