ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX17826861 | 293
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX10976388: 293

◢ SRX10976389: 293

◢ SRX150671: 293

◢ SRX16676305: 293

◢ SRX16676306: 293

◢ SRX17826856: 293

◢ SRX17826857: 293

◢ SRX17826858: 293

◢ SRX17826859: 293

◢ SRX17826860: 293

◣ SRX17826861: 293

◢ SRX22117740: 293

◢ SRX22117741: 293

◢ SRX22117742: 293

◢ SRX22117743: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX1799522: CD4+ T cells

◢ SRX1799525: CD4+ T cells

◢ SRX1799528: CD4+ T cells

◢ SRX1799531: CD4+ T cells

◢ SRX671999: ES cells

◢ SRX672001: ES cells

◢ SRX672002: ES cells

◢ SRX9823127: GM12878

◢ SRX9823128: GM12878

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX11220464: HT-29

◢ SRX11220465: HT-29

◢ SRX11220466: HT-29

◢ SRX9977682: HUVEC

◢ SRX1925740: iPSC derived neural cells

◢ DRX402530: K-562

◢ DRX402531: K-562

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX5457586: K-562

◢ SRX5457587: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX12813813: MCF-7

◢ SRX12813814: MCF-7

◢ SRX1497516: MCF-7

◢ SRX7030916: MCF-7

◢ SRX7030917: MCF-7

◢ SRX7030918: MCF-7

◢ SRX7030919: MCF-7

◢ DRX402534: MYL

◢ DRX402535: MYL

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

COL23A1
FRG2C
MTRNR2L2
MSH3
DHFR
MTRNR2L1
MTRNR2L8
DUX4
FRG2
GTPBP6
EPN1
ITGB3BP
EFCAB7
DCP1A
PEX3
ADAT2
NME1-NME2
NME1
TEX19
GBA
SNAP47
JMJD4
COPS7B
PDE6D
CYP4F11
NDUFS7
POLR2J3
TMEM101
ZSCAN22
TMEM242
BRWD1
CRYAA2
CRYAA
DRG2
WDR11
TOP3B
GOLGA3
EIF2D
MRPS31
SMARCD2
TXNIP
PAXBP1
INTS12
GSTCD
STX16
UTP3
NR1H3
ACP2
KMT2A
SNRPD3
GUCD1
PRPSAP1
GOSR2
RNF187
RBBP5
CASC3
STAT3
ZNF76
INO80C
METTL9
NR1H2
PSMF1
CCDC97
HEMK1
C3orf18
DSTYK
HMGB1
USPL1
TOR1AIP2
TOR1AIP1
ARHGEF1
SPATC1L
MED23
FXN
SMG8
MRPL39
SLC39A3
TSNAX
CLTC
RBM28
CCNG2
LINGO1
RPS7
GTF2H2
GTF2H2C
MRPL48
THEM4
TATDN3
NSL1
GFI1B
TSC1
CCDC200
NUDCD3
ZNF335
SELENOW
MPHOSPH10
MCEE
UBB
DRAP1
C11orf68
SF3A3
TEFM
NOP16
HIGD2A
LMAN2
NUF2
ZNF408
ARHGAP1
NCBP3
TVP23B
TMA16
ARID2
SSBP1
UBE3B
TRIP4
ZNF561
SNRPD1
HEXIM1
UBC
NKAP
MRPL44
SLC33A1
PRPF18
STMN3
RTEL1
DUS2
DDX28
PTPN21
TAF3
TACO1
ATXN7L2
GALR1
STX18
SMG7
NVL
GIT2
ANKRD13A
WASHC1
RTTN
TTC4
ZCCHC4
KAT6A
NUP54
ALKBH3
VPS25
NSFL1C
IPO4
MRPL40
HIRA
ZBTB45
SNX17
EIF2B4
VPS33A
DMAP1
DDX46
FRA10AC1
FAM207A
KANSL3
FER1L5
PSMB7
TAOK3
SUDS3
ZMPSTE24
GTF3C5
TIMM22
ZNF839
ZBTB17
C18orf21
TIGD1
EIF4E2
RBL1
PPIP5K2
GIN1
EIF3F
RNF121
LOC100133315
BMS1
TTC26
TBC1D13
PIGL
NCOR1
DPY19L4
NDUFS3
KBTBD4
KCTD5
C12orf73
RFXANK
BORCS8
ANKRD36B
FAM187A
EFTUD2
CCDC103
MTF2
EIF1AD
BANF1
DHX40
PREPL
CAMKMT
UQCC1
GTF2H2C_2
YARS1
S100PBP
DNAJB12
TRDMT1
SEC22B
HNRNPA1L2
VPS45
PAFAH2
HUS1
REXO4
ADAMTS13
MRPS23
MAN2C1
MCOLN1
PPP6R1
KDM1A
TEX46
CXXC1
PCDH9
NDUFB3
FAM126B
TRUB2
COQ4
VPS13B
MRPL16
UBQLN1
BANP
SEC13
PIH1D2
NKAPD1
HSPE1-MOB4
HSPE1
HSPD1
PRRG2
NOSIP
MRPL58
SF3A1
CCDC157
TOMM22
EDC4
CDK5RAP1
FBXO22
COMMD2
MTIF2
ERCC6L2
MAPK1IP1L
DCAF10
ATR
HINT3
EIF2B3
ZSCAN12
PDE12
BICD2
CCNC
DUS1L
DPP9
SLC35A3
STMP1
COX16
SCFD1
ZBTB40
AGK
UPF2
SLC24A1
INTS14
PPP5D1
CALM3
LTN1
RHBDD3
EWSR1
LRRC59
CTDSP1
ZNF148
C6orf226
SLC44A1
KCNJ15
KRBA1
SMCO1
GCNT7
FAM209A
YPEL3
TATDN2
AADACL4
BSDC1
UBE2F
MBOAT4
TMEM89
IRAK2
EXTL2
ZNF562
DUSP6
FAM153B
DEGS2
DBNDD2
PDE11A
GORASP2
SNCG
MMRN2
CTAG1B
CTAG1A
FAM184A
SARS2
MRPS12
ST20-MTHFS
RABGAP1
TMEM229B
FEM1C
CBX1
ZNF572
COL18A1
TXNRD2
APOA1
TBX6
FAM227B
DTWD1
APOBEC3B
BCR
ZNF324B
ZNF761
ARHGAP39
BCAR3
LEP
AURKAIP1
TLR2
SUMO3
SAMD4B
LUC7L2
FMC1-LUC7L2
FMC1
OR4K17
C2orf88
MON2
PRRT1B
ANP32D
PRSS38
PUM1
SCCPDH
ACYP2
GSTM5
RFC1
GPRC5C
CNOT3
FAAH
SDR42E1
RBPJ
ST6GALNAC6
CEP85
SLC1A7
ACAA2
BAAT
IGFALS
ADCY10
RPS29
CCDC130
IL21R
SLC27A5
YWHAQ
ZNF117
TTLL12
SEM1
TMEM41A
ZNF623
RAB37
CALCB
RPL27
SATB1
SULT1C3
CEP72
PPIG
JMJD1C
RABGAP1L
RBM33
PLEC
ZNFX1
IFT88
TMEM70
ELOC
ZNF577
IL36A
GPD1L
NOS3
GDPGP1
CIB1
TTC32
POLE4
MROH7
C19orf18
CYP17A1
NARF
CALD1
NPAS4
TBC1D19
HERPUD2
MAPRE2
ACOX3
SELENOH
ZNF426
TMEM14C
ZFP30
TMEM43
CHCHD4
CFHR4
SKP2
LMBRD2
APOL4
ZNF317
CLK4
TRMT44
ENG
RPL37
GALNT1
DNAJC25-GNG10
DNAJC25
PRELID3B
PNPLA7
ATP1A1
ADI1
ZSCAN31
POLR3B
CYBC1
TMEM62
RBBP9
NME4
KDM3A
ZNF792
LMLN2
TFPT
PRPF31
RERE
RPS14
GSTA4
CAT
YTHDC2
CLDN16
LIPA
CCDC59
ZNF134
PSEN1
PDCD7
ALG10B
PIK3R1
RAD54L2
FRG1
SLC25A51
TIGD2
GTF3C3
REEP3
TDP2
ACOT13
MAD1L1
TMEM68
TGS1
THAP11
NUTF2
VTA1
NMBR
SFT2D3
SUPT7L
SLC4A1AP
RPL11
GTF2H4
ANKRD54
PARP15
LSG1
EPS8
INTS5
AUH
YJU2
EIF3L
CENPT
BAIAP2
ACTL8
FBXO31
ZNF32
AP3S2
YY1AP1
DAP3
CATIP
GLO1
ZNF341
MSRA
MMACHC
CCDC163
WDR36
TMEM44
HTR5A
GCNT3
ITGA4
LCN8
SNIP1
DNALI1
THOC5
CAMK1D
FGD3
ZNF841
ESR2
PRIM2
ORC4
MBD5
REN
ZNF829
ZNF568
PPP1R11
GINS1
SCAND1
DEK
SUPT6H
SDF2
MRPL21
IGHMBP2
SCARF1
SCMH1
WDR74
C3orf14
SLC2A7
ILF2
SLC41A3
ATP5MC2
USP30
LARP1
SGCE
PEG10
EFCAB10
POLR3E
TMEM222
RILP
HSD17B6
NEMF
SAR1B
CCSER2
SLC29A2
FAM133B
FGFBP3
ZNF571
ZNF540
NBN
ZNF391
SPAAR
RMND1
ARMT1
TSEN15
C1orf167
AKAP10
GALK2
MOB4
MRPL1
BNIP1
C17orf75
IST1
WDR43
METTL8
DCAF17
GTPBP3
ANO8
LGR5
MRPS18C
HELQ
CD47
SMIM31
MMP7
KLHL20
ATP9B
C1GALT1C1L
ZNF226
TUT1
DUSP16
GABPB2
ARID1A
TMEM79
SMG5
COPS4
SCNM1
LYSMD1
NOTCH2NLC
NFE2L3
CANT1
SAMD4A
NCOA7
GASK1A
TTI2
NSA2
GFM2
OTUD7A
DDX18
WDR55
C16orf54
ANXA2
COLEC11
TMX2
MED19
OAZ3
CFAP298-TCP10L
CFAP298
ATF7IP
CTNNB1
HYAL1
RUVBL1
KIAA1549
NRBP2
ZNF566
FASTKD1
SNRPB
NDUFAF1
HACL1
BTD
POLG
ZSCAN25
CPPED1
RAB30
MLEC
EXO5
CASP4
LZTR1
RTCA
STAU1
CLTB
MNAT1
PIN4
MITD1
C8orf37
SERHL2
TPR
ODR4
AFAP1L1
ZNF609
LSS
FBXL12
SLC45A4
ANK3
CLDN4
INPP5F
H4C8
RMDN2
CCNI
SERPINB1
OPA1
CD14
PCP4L1
RPS20
ADPRS
ADNP
KLRD1
CCAR2
C8orf58
MTBP
MRPL13
CHD1L
GOLGA5
B4GALT7
TLNRD1
GMPS
COX7A2
SUGCT
MPLKIP
TEKT2
TMBIM4
PSRC1
EPRS1
GRPEL2
TPM1
SLTM
BRF2
GPAM
FAM228B
FABP6
CCDC150
MED18
RNASET2
REM1
DEFB124
TIPARP
SLC35E2A
DCLRE1B
AP4B1
IAH1
TSFM
DGKZ
ING2
SDHAF3
NAA20
PARP2
SRSF7
LOC102724265
SF3B6
PIGW
MYO19
SLC39A13
CRKL
HNRNPD
TRIM38
ADRM1
PHIP
MATK
ZNF398
KRTAP10-8
ZNF772
CCNT1
COPS2
SLC38A9
ADAR
RANBP1
UBLCP1
EIF3E
ZNF292
TPK1
MRPL34
SESN1
PSMD3
POLR1H
NECAP2
CLUAP1
SMU1
AMD1
TTLL1
LRIG2
CDC73
TRMT2A
VIRMA
MRPL3
SNRPB2
RAB18
TGFBR2
LRP6
PRDX3
ALG10
PLEKHM3
N4BP2L2
RPL26L1
LRRC37A3
TEX50
CDYL
FAM98B
CADM2
ZNF280D
SEC23B
PRRC1
MTOR
LONRF2
FBXO38
TTC13
CCR6
SCGB1C1
CALCRL
LNPEP
MTR
PUS10
PEX13
WWTR1
CENPV
WBP1
MAGOH
INO80B
RNF125
SACM1L
DLAT
ZNF605
NFAT5
TMED1
R3HCC1
ZNF165
CCDC88A
RBM45
ZSCAN30
PIP4P2
AARS2
SNRPE
COA6
CEP57L1
NBPF1
CDK19
PDCD6IP
LSM5
ZNF554
FOXN1
CASP10
DHRS2
ANKRD40
RPL5
TARS3
MRPS14
PPIAL4F
PPIAL4E
PPIAL4D
LPIN1
TRMT5
SLC38A6
TSGA10
C2orf15
STOML2
TIAM1
RPS15
ZNF438
HAX1
KMT2D
AVL9
ACSM2B
SRRM3
MYCBP2
RNF6
PSMD6
DPP8
AAR2
SUGT1
FAM234A
DDX1
GABPA
ATP5PF
SPSB1
MSL2
TEX9
RFX7
PRKAG2
CEP85L
SRP9
CASS4
PPP2R5B
PRMT5
POM121L2
SMIM13
KRR1
THAP6
TTC5
U2SURP
NMNAT1
LZIC
H4C12
C10orf88
WWOX
CLUL1
ZNF383
MFF
ZNF512B
TMEM42
CEP120
ITFG2
YTHDF2
PRKAB2
TRAM1
CDIPT
SLC35E2B
HLA-E
TBCK
AIMP1
STK19
DXO
CREM
NOXA1
ITGAL
RPS3A
CBWD5
EPB41
SEL1L
DHX16
ZZZ3
RCAN1
PCBP2
NOTCH2NLA
MRPS33
HIP1
GSPT1
GCNT1
WDFY1
SGMS2
TBL1X
PTPN4
SLC35B1
CNN2
NUP107
GLIPR1L2
ATG101
ZNF385A
RRN3
ZNF439
TMEM259
ZNF546
SLC35G5
MRPL19
PPP1R3B
SDCCAG8
CEP170
PDRG1
EEA1
LTA4H
ARRDC2
ZNF425
SEC14L1
H4C11
NSUN4
NDFIP1
RPS19
HEATR4
TFPI
ASF1A
PFKM
MAP1LC3B2
DHTKD1
MEMO1
SOD2
RALBP1
TULP4
GNB2
ZNF518A
DNAJC11
SAE1
RABGGTA
STX6
KNL1
CDK12
CYB561D1
XKR7
RESF1
METAP1
KIF2C
CELF2
ELAVL3
PES1
OR2AP1
ARMH3
MED4
ZNF846
PHF21A
IFI44
CNOT11
RTN4
PAK1IP1
INTS2
C6orf52
CYB5A
ACBD6
SET
MMEL1
STC1
NUDT9
SEC14L5
ATG4C
CCDC115
ZNF770
TMEM65
MTMR6
FAM13A
C11orf49
LMBR1L
UGCG
RRP15
DCT
TLR1
ATG5
ABCC10
FLT3LG
TM9SF4
CUL2
ZER1
RIF1
NT5DC1
DISP1
SMIM12
POLR2E
LRRC61
HEATR1
QRICH1
PRAME
ZNF3
YBEY
RUNX2
MCM3AP
C2CD5
MRPS15
RPS26
WDR70
POLR3GL
ANKRD34A
FAIM
ATP5MC3
RPL38
INTS4
P3H4
FKBP10
RAB5C
CIZ1
CRBN
IQSEC3
FOXJ3
CBR1
ALG14
GARS1
PTGES2
INKA2
DDX20
TMBIM1
CNGA1
SETD1A
ZNF527
COG2
ZNF296
GEMIN7
GTF2A1L
ABLIM1
VWA8
IL36RN
IL36B