ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX553665 | hESC H1
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX10976388: 293

◢ SRX10976389: 293

◢ SRX150671: 293

◢ SRX16676305: 293

◢ SRX16676306: 293

◢ SRX17826856: 293

◢ SRX17826857: 293

◢ SRX17826858: 293

◢ SRX17826859: 293

◢ SRX17826860: 293

◢ SRX17826861: 293

◢ SRX22117740: 293

◢ SRX22117741: 293

◢ SRX22117742: 293

◢ SRX22117743: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX1799522: CD4+ T cells

◢ SRX1799525: CD4+ T cells

◢ SRX1799528: CD4+ T cells

◢ SRX1799531: CD4+ T cells

◢ SRX671999: ES cells

◢ SRX672001: ES cells

◢ SRX672002: ES cells

◢ SRX9823127: GM12878

◢ SRX9823128: GM12878

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◣ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX11220464: HT-29

◢ SRX11220465: HT-29

◢ SRX11220466: HT-29

◢ SRX9977682: HUVEC

◢ SRX1925740: iPSC derived neural cells

◢ DRX402530: K-562

◢ DRX402531: K-562

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX5457586: K-562

◢ SRX5457587: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX12813813: MCF-7

◢ SRX12813814: MCF-7

◢ SRX1497516: MCF-7

◢ SRX7030916: MCF-7

◢ SRX7030917: MCF-7

◢ SRX7030918: MCF-7

◢ SRX7030919: MCF-7

◢ DRX402534: MYL

◢ DRX402535: MYL

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

FAM153B
FRG2C
FRG2
KCNJ15
THEM4
ZNF512B
CNOT3
SULT1C3
ANP32D
LMLN2
CFHR4
TLR2
SNCG
MMRN2
SUPT6H
SDF2
MAD1L1
PIN4
RBPJ
APOBEC3B
COL23A1
C1GALT1C1L
PPP1R3B
ZNF117
IRAK2
SARS2
MRPS12
CALCB
CADM2
C2CD4C
COLEC11
MBOAT4
C16orf54
OR6J1
DUX4
GCNT7
FAM209A
BAAT
REM1
DEFB124
GORASP2
NFE2L3
LEP
CYP4F11
DBNDD2
PRDX3
BCAR3
ATP9B
DUSP16
SMCO1
CTAG1B
CTAG1A
TMX2
MED19
MRTFA
CASP10
VN1R4
LSS
CLDN4
GPD1L
KRTAP5-2
RBM5
ZNF761
PRSS38
ENPP1
UBE4B
ZNF566
INPP5F
DGKQ
TULP4
CYP17A1
MRAP2
SIVA1
FGD3
GCNT1
ACSM2B
C2orf88
SATB1
GSTM1
SEM1
IQCF2
LRIG2
OR1E3
TMEM44
CCDC149
BCR
RPL11
NARF
CYBC1
PNPLA7
EXTL2
RFC1
H4C12
H4C11
B4GALNT2
TMEM202
SRPRB
FASTKD1
PSPC1
ZNF577
RAB6D
TXNRD2
ALDH7A1
SLC2A11
TBC1D5
SMIM31
SLC2A7
FEM1C
RMDN2
CYP4X1
MON2
OR2AP1
ANXA3
EML2
GSTM5
PDCD7
OR8B3
ADCY10
PSEN1
ZNF324B
OR4K17
ACSM2A
GTF2A1L
ACAA2
SCCPDH
DLAT
FAM184A
SLC38A9
MPHOSPH8
TFPI
RTP3
TNFRSF6B
NUDT3
PIK3R1
THOC5
RTCA
CCDC83
ZNF677
VN1R2
OR1J4
PHB
VCX3B
AMDHD1
ZNF280D
LBR
ZNF792
STK19
DXO
TMEM62
H1-7
BCKDK
OR7C2
SEC63
TMEM68
TGS1
PUS1
SLCO1B3
ZNF562
PRKAG2
HLA-F
HYOU1
DCTN4
ERBB3
ARRDC2
LMBR1L
HNRNPL
OMP
ADI1
THOC2
KRTAP12-2
ABCC10
PLSCR4
SDR42E1
ZNF329
DDC
SLC35G5
CELF2
CAT
TAAR9
SEL1L
CCDC38
KRTAP10-8
APOL4
CEACAM21
LRTM2
TMBIM4
CTNND2
PTGES2
MRPS36
GLT6D1
AADACL4
USHBP1
STK32C
ZFP42
GTPBP6
PDIA2
GTF3C2
POLH
XPO5
GASK1A
PPP2R5A
CLEC12A
IL34
SLC35G4
CTAGE9
PIGZ
ERICH3
SRSF7
CCNY
SLC27A5
NRBP2
WWTR1
CTAGE8
CTAGE4
CD14
GINS1
KLHL41
VCX3A
COX8C
UGT1A3
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
SPAAR
FBXO31
LIPA
EHD2
DCTN6
CD248
PRAME
BDH1
IGFALS
PTPDC1
TTC5
TRIM69
MTRNR2L1
C5orf34
IL1RL1
KLRD1
FABP6
KRT82
DNAH6
KRTAP10-4
LCN8
IL36RN
IL36B
ST20-MTHFS
RNASET2
SH2D4B
MSRA
SYN3
FBXL12
CYB5A
SLC25A18
SNX16
CASP4
USP17L20
USP17L22
ZNF557
PDE11A
PRPF8
PDRG1
NANOGP8
FANK1
MKRN3
CDC14C
PLGRKT
CT45A10
SLC35G3
PRIM2
LCE3A
RABL6
C3orf14
KIF2C
EIF4E
ZNF114
TEX19
IAH1
C1QA
ZNF426
SH3BP5L
PTPN12
SPRR2F
YJU2
PHC2
PFKFB3
HYAL1
RTL6
CPA1
EIF4EBP2
TBCK
AIMP1
TTYH3
VCX
MS4A13
GALNT1
LGR5
PPEF2
CDYL
MS4A1
GOLGA6L7
RNASE10
TTC38
PKDREJ
ARL13A
ELAPOR2
PRKAA1
COL26A1
SULT1B1
CFAP73
GAS2L3
CLDN16
EFCAB10
OAZ3
TM4SF1
BANP
SLC41A3
MEST
NSUN7
RAB29
BRMS1L
KMT2A
CLEC4E
ZNF485
USP17L18
USP17L11
USP17L21
USP17L12
ASPSCR1
CD200R1L
TAS2R4
HSD17B4
SERHL2
PPARD
NOC4L
ZNF550
CHODL
USP17L15
UGDH
TEDDM1
ZMYM5
TLR1
DEFB108B
SPARCL1
TUBAL3
OTUD7A
FANCI
NAT8
SGCE
PEG10
ARHGAP40
RDH16
ART1
OR1D2
CYP2C8
ZNF623
CRYAA2
CRYAA
PRSS41
TMOD1
C9orf72
CYP1A1
CLK4
SERPINF2
SET
CRY2
PDGFRL
ZNF582
GCSAML
LRRC74A
ADAM20
ABHD3
LGR6
ENOSF1
IQGAP2
TNFRSF21
CATSPER2
SLC22A1
METTL16
GCNT3
FAM25E
ZNF699
SLC25A48
CRYBB2
YWHAB
ARHGAP39
ACOX3
TRMT44
ZNF398
ZNF425
GINS3
CCS
CCDC87
NEUROG3
HGC6.3
HEATR4
BTNL10
ZNF572
RANBP9
CD47
FAM240C
GLO1
HSD17B6
ANK3
IFI44
AHCY
TAS2R13
ZNF584
NME2
C19orf18
DNAJB13
YWHAE
GP5
PTCHD3
TUBA8
NPFFR2
GPR50
TACC2
PRKAR1A
AKR1D1
OPRL1
LKAAEAR1
COL18A1
HTR1F
LLPH
MATK
CRY1
PLCXD1
SCGB1C1
CDC16
OR5L1
TSPY8
TSPY4
TSPY3
TSPY10
TSPY1
NNT
TEX49
AUH
UBLCP1
REN
PCP4L1
PGK1
SLC35E4
VCX2
ZNF610
ORC5
TAF13
KRBA1
YPEL3
TATDN2
BSDC1
UBE2F
MTRNR2L2
MSH3
DHFR
MTRNR2L8
TMEM89
DUSP6
ITGB3BP
EFCAB7
DEGS2
GBA
RABGAP1
TMEM229B
CBX1
APOA1
TBX6
FAM227B
DTWD1
NUF2
PAXBP1
MTF2
RBBP5
RPS7
SSBP1
DMAP1
AURKAIP1
SUMO3
SAMD4B
LUC7L2
FMC1-LUC7L2
FMC1
PRRT1B
SF3A3
PUM1
STX16
ACYP2
GPRC5C
FAAH
NDUFS7
MED23
ST6GALNAC6
CEP85
SLC1A7
NME1-NME2
NME1
COX16
DCP1A
RPS29
CCDC130
IL21R
PEX3
ADAT2
YWHAQ
TTLL12
TMEM41A
INTS12
GSTCD
RAB37
TMEM242
EIF2D
RPL27
CEP72
PPIG
JMJD1C
RABGAP1L
RBM33
ZMPSTE24
PLEC
ZNFX1
IFT88
NDUFB3
FAM126B
TMEM70
ELOC
FRA10AC1
MRPL44
IL36A
NOS3
GDPGP1
CIB1
TTC32
POLE4
MROH7
DCAF10
HMGB1
CALD1
DSTYK
NPAS4
TBC1D19
HERPUD2
MAPRE2
SELENOH
USPL1
TMEM14C
GTF2H2C_2
ZFP30
TMEM43
CHCHD4
SKP2
LMBRD2
TRIP4
GTF2H2
SLC24A1
INTS14
POLR2J3
ZNF317
STX18
GTF2H2C
ENG
RPL37
TOP3B
DPY19L4
DRG2
DNAJC25-GNG10
DNAJC25
PRELID3B
ATP1A1
PAFAH2
COMMD2
SLC33A1
ZSCAN31
ZNF561
POLR3B
TOR1AIP2
TOR1AIP1
RBBP9
NME4
KDM3A
TFPT
PRPF31
RERE
RPS14
ZNF408
ARHGAP1
GSTA4
MRPS31
TATDN3
NSL1
SMARCD2
YTHDC2
UTP3
PPIP5K2
GIN1
CCDC59
ZNF134
ALG10B
NSFL1C
IPO4
RAD54L2
SLC44A1
FRG1
DNAJB12
SLC25A51
TIGD2
GTF3C3
REEP3
TDP2
ACOT13
EIF3F
THAP11
NUTF2
VTA1
NMBR
SFT2D3
SUPT7L
SLC4A1AP
GTF2H4
ANKRD54
PARP15
LSG1
EPS8
INTS5
EIF3L
CENPT
MRPL40
HIRA
RTTN
BAIAP2
ACTL8
ZNF32
AP3S2
YY1AP1
DAP3
SMG8
STAT3
CATIP
REXO4
ADAMTS13
CCDC200
ZNF341
BMS1
CDK5RAP1
MMACHC
CCDC163
WDR36
PPP6R1
HTR5A
KDM1A
ITGA4
TEFM
SNIP1
DNALI1
CAMK1D
INO80C
RNF187
DRAP1
C11orf68
EIF1AD
BANF1
SNAP47
TACO1
ZNF841
ESR2
ORC4
MBD5
ZNF829
ZNF568
PPP1R11
ZBTB45
SCAND1
COPS7B
DEK
MRPL21
IGHMBP2
SCARF1
SCMH1
JMJD4
WDR74
PSMF1
KANSL3
FER1L5
ILF2
ATP5MC2
USP30
LARP1
SNX17
EIF2B4
FAM207A
TTC26
TRUB2
COQ4
POLR3E
TMEM222
RILP
NEMF
WDR11
SAR1B
CCSER2
SLC29A2
DUS1L
FAM133B
FGFBP3
CCDC97
ATR
ZNF571
ZNF540
NBN
ZNF391
RMND1
ARMT1
TSEN15
C1orf167
AKAP10
MTIF2
GALK2
MOB4
MRPL1
BNIP1
DPP9
C17orf75
IST1
WDR43
METTL8
DCAF17
GTPBP3
ANO8
MRPS18C
HELQ
MMP7
KLHL20
ZBTB40
ZNF226
TUT1
GABPB2
ARID1A
TMEM79
SMG5
COPS4
SCNM1
LYSMD1
NOTCH2NLC
CANT1
HSPE1-MOB4
HSPE1
HSPD1
MRPS23
SAMD4A
NCOA7
TEX46
TTI2
NSA2
GFM2
CCNC
DDX18
WDR55
ANXA2
CFAP298-TCP10L
CFAP298
ATF7IP
MRPL48
CTNNB1
RUVBL1
KIAA1549
GTF3C5
SNRPB
NDUFAF1
HACL1
BTD
POLG
ZSCAN25
CPPED1
RAB30
MLEC
EXO5
LZTR1
SEC13
STAU1
CLTB
MNAT1
NUP54
MAN2C1
MITD1
C8orf37
TTC4
TPR
ODR4
AFAP1L1
ZNF609
NR1H3
ACP2
SLC45A4
ZCCHC4
TMEM101
H4C8
CCNI
SERPINB1
OPA1
NDUFS3
KBTBD4
RPS20
ADPRS
ADNP
PDE6D
CCAR2
C8orf58
MTBP
MRPL13
CHD1L
GOLGA5
B4GALT7
TLNRD1
PRPF18
GMPS
COX7A2
SUGCT
MPLKIP
TEKT2
NOP16
HIGD2A
C18orf21
PSRC1
EPRS1
GRPEL2
TPM1
SLTM
BRF2
GPAM
FAM228B
BRWD1
CCDC150
MED18
SNRPD1
TIPARP
SLC35E2A
DCLRE1B
AP4B1
TSFM
DGKZ
ING2
SDHAF3
NAA20
PARP2
METTL9
ALKBH3
SLC35A3
LOC102724265
SF3B6
PIGW
MYO19
SLC39A13
CRKL
HNRNPD
TRIM38
ADRM1
PHIP
CASC3
ZNF772
CCNT1
COPS2
HUS1
ADAR
RANBP1
EIF3E
ZNF292
TPK1
MRPL34
TIMM22
SESN1
PSMD3
POLR1H
NCBP3
NECAP2
CLUAP1
SMU1
AMD1
TTLL1
CDC73
TRMT2A
VIRMA
MRPL3
SNRPB2
RAB18
TGFBR2
LRP6
ALG10
PLEKHM3
N4BP2L2
RPL26L1
LRRC37A3
TEX50
FAM98B
SEC23B
AGK
PRRC1
GFI1B
MTOR
LONRF2
SMG7
FBXO38
TTC13
CCR6
SEC22B
CALCRL
LNPEP
MTR
PUS10
PEX13
CENPV
TIGD1
EIF4E2
WBP1
MAGOH
INO80B
KAT6A
RNF125
SACM1L
ZNF605
NFAT5
TMED1
R3HCC1
ZNF165
CCDC88A
RBM45
ZSCAN30
PIP4P2
AARS2
SNRPE
COA6
CEP57L1
NBPF1
CDK19
PDCD6IP
LSM5
ZNF554
FOXN1
DHRS2
PIH1D2
NKAPD1
ANKRD40
RPL5
TARS3
PPP5D1
CALM3
MRPS14
PPIAL4F
PPIAL4E
PPIAL4D
LPIN1
TRMT5
SLC38A6
TSGA10
C2orf15
CLTC
STOML2
TIAM1
RPS15
ZNF438
HAX1
KMT2D
AVL9
ZSCAN22
SRRM3
MYCBP2
SNRPD3
GUCD1
RNF6
PSMD6
DPP8
AAR2
SUGT1
FAM234A
DDX1
GABPA
ATP5PF
VPS13B
SPSB1
MSL2
TEX9
RFX7
CEP85L
SRP9
CASS4
PPP2R5B
PRMT5
POM121L2
ZNF76
SMIM13
KRR1
THAP6
U2SURP
NMNAT1
LZIC
MRPL16