ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX9823127 | GM12878
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX10976388: 293

◢ SRX10976389: 293

◢ SRX150671: 293

◢ SRX16676305: 293

◢ SRX16676306: 293

◢ SRX17826856: 293

◢ SRX17826857: 293

◢ SRX17826858: 293

◢ SRX17826859: 293

◢ SRX17826860: 293

◢ SRX17826861: 293

◢ SRX22117740: 293

◢ SRX22117741: 293

◢ SRX22117742: 293

◢ SRX22117743: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX1799522: CD4+ T cells

◢ SRX1799525: CD4+ T cells

◢ SRX1799528: CD4+ T cells

◢ SRX1799531: CD4+ T cells

◢ SRX671999: ES cells

◢ SRX672001: ES cells

◢ SRX672002: ES cells

◣ SRX9823127: GM12878

◢ SRX9823128: GM12878

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX11220464: HT-29

◢ SRX11220465: HT-29

◢ SRX11220466: HT-29

◢ SRX9977682: HUVEC

◢ SRX1925740: iPSC derived neural cells

◢ DRX402530: K-562

◢ DRX402531: K-562

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX5457586: K-562

◢ SRX5457587: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX12813813: MCF-7

◢ SRX12813814: MCF-7

◢ SRX1497516: MCF-7

◢ SRX7030916: MCF-7

◢ SRX7030917: MCF-7

◢ SRX7030918: MCF-7

◢ SRX7030919: MCF-7

◢ DRX402534: MYL

◢ DRX402535: MYL

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

RANGAP1
FRG2C
STARD10
PHF13
ZNF286A
TIMM22
IFRD2
TNFAIP1
IFT20
IPO13
PSMC4
TBC1D23
ZNF331
MICOS13
HSD11B1L
ERCC4
AP2S1
MRPL24
GSPT1
DUX4
STMN3
RTEL1
ZNF414
GAL3ST3
SF3B2
MMACHC
CCDC163
SEC11C
SERTAD3
ACIN1
C14orf119
RPS27A
CLHC1
FAM193A
PAFAH2
CXXC1
ZNF565
ZNF146
TMEM245
CLPB
NOLC1
MTRNR2L1
TERF2
STIL
ANO10
PSMD2
ZNF256
CARM1
VPS35L
PHF12
FBXO48
APLF
SLC4A2
CDK5
GTF2H4
EIF1B
ZNF56
MEA1
KLHDC3
SYMPK
FOXA3
DUS3L
PRCC
NT5C3A
MPI
GORASP2
PIK3R2
ZNF268
ZSWIM9
LIG1
OSCAR
NDUFA3
APEH
REXO1
CHMP5
BAG1
ZSCAN22
ZW10
PA2G4
KPTN
ST3GAL2
ZNF180
ATP6V1FNB
ATP6V1F
TMEM208
LRRC29
DNAJB12
UPK3BL1
CEP128
RETSAT
CALCOCO1
C12orf43
STXBP3
DAXX
FZR1
CNPY2
GSK3A
SAMHD1
SLC39A1
CRTC2
SRRM2
CFAP20
ZCCHC8
NEURL4
SYNGR4
N4BP2L2
ZNF133
ETFDH
C4orf46
ZNF227
PRRG2
NOSIP
BTRC
TSPAN17
TBC1D31
ABLIM2
EPRS1
SCGB1C1
PEMT
GATB
AHCY
ACP6
SPNS1
CDC6
SERF2
SMPD3
EIF1AD
BANF1
MPHOSPH10
MCEE
RPGRIP1L
FTO
NSFL1C
POLR2E
PGM2L1
PI4KB
ADCK1
ZNF408
ARHGAP1
C1orf159
FOXP4
DOP1B
PKD1
SCNM1
LYSMD1
NOP16
HIGD2A
HEXIM2
RNASEH1
PANK3
TMEM139
CASP2
ZNF500
CNIH1
CNIH4
DNAJC16
CASP9
CNEP1R1
LINS1
ASB7
PFKFB4
ZNF530
TMEM191C
ZNF557
UBR2
ZDHHC16
EXOSC1
RBBP5
WBP1
INO80B
TMEM59
PRKCSH
CCDC151
MFN2
SDCCAG8
CEP170
TSSC4
U2SURP
C1orf74
BARD1
TMEM115
ZNF7
TMEM201
CCDC59
SPHK2
RPL18
FAM83E
THOC3
HAUS6
GTF2IRD2B
GAPVD1
ZNF446
ABCF3
EXOC3L1
DCTN1
E2F4
ITGB3BP
EFCAB7
BANP
TBL3
FNTB
RNF151
FBXO46
ZNF547
TRAPPC2B
DNAJC28
SMIM12
PPP4R3B
STK25
C19orf67
ZC3H3
ZFP90
PLTP
CYB561D1
ATL3
USP35
KCTD21
CACTIN
SLC35B1
ZNF546
TMEM199
POLDIP2
MAP2K7
NACA
ZNF84
ESCO2
USP34
RPL13A
RBIS
SNAPC3
FAM98A
PELI1
ZMAT5
UQCR10
WDPCP
MDH1
INTS9
HMBOX1
ENDOG
KBTBD6
UTP6
SNAPIN
THOC6
HCFC1R1
TNFRSF12A
SKP2
LMBRD2
RPL37
DGAT1
ERICH4
DMAC2
RIC8A
BET1L
PNKD
AAMP
MFSD3
GPT
MZF1
PLAUR
SSBP1
SNX17
EIF2B4
BNIP1
TSC22D4
NYAP1
BIRC6
FBXO9
CILK1
CDC27
EIF4B
CCAR2
C8orf58
ZNF605
SEC14L1
FAM220A
SYNCRIP
CNOT1
DNAJA3
RPP40
CCDC150
TMED4
TPR
ODR4
PARP2
FAM168A
CTDP1
DIXDC1
CRYAB
CLPP
CLPX
ATR
ZNF25
ICE1
PAK2
BUB1B
INVS
ERP44
CEP162
TOP1
EIF2D
RPL26
RNGTT
EFHB
RAB5A
FEM1B
KIFAP3
TFB2M
CNST
YTHDF1
ZNF444
TIMM17A
KANK2
LYSMD3
RPL27
TOR1AIP2
TOR1AIP1
ZNF134
TMEM68
TGS1
HIF1AN
VCPIP1
C8orf44-SGK3
LARS1
KMT5A
SETMAR
LRRC37A3
WWOX
GTF2B
ARHGAP9
MARS1
POLR3F
DZANK1
NDUFV1
NDE1
MARF1
RAB1B
CYP20A1
ATP6V0D1
AGRP
SDE2
ZNF14
MBD1
AFG3L2
MAMSTR
AURKAIP1
RMND1
ARMT1
MRPL15
CC2D1B
TRIP4
SLC33A1
COG2
MAPK1
TSNAX
RIC8B
RPP14
HTD2
TMEM18
EIF1
SNRNP70
AKR1A1
SLC24A1
INTS14
ZNF383
ZNF576
IRGQ
CTU1
DUOXA1
DUOXA2
DUOX2
SEH1L
CIBAR2
SCAND1
NMNAT1
LZIC
RALBP1
MTRES1
RAB6A
C8orf76
DHX9
RTTN
PRPSAP1
MEMO1
SIVA1
PUM3
CEP350
NAA35
STRN
FDXR
POLR3H
ZMPSTE24
RAB18
TSGA10
C2orf15
DHX8
CNOT4
UBFD1
EARS2
SLC25A11
RNF167
RPS3A
PPRC1
DCAKD
SEC61A2
VKORC1
CCNT2
SUFU
ACTR1A
NMT1
IQCB1
EAF2
SPG21
CCL5
DCP1A
PHB
EMILIN1
COPS7A
PLD3
C19orf47
ZNF497
RPL18A
RAB5C
TPGS1
LONP1
CATSPERD
SAYSD1
LIMK2
ZNF764
MZT1
BORA
SLC35E2A
PLK3
ZNF416
CCAR1
ZNF816-ZNF321P
ZNF816
AP2M1
WDR54
C2orf81
SARS2
MRPS12
TRUB2
COQ4
AMBRA1
SPAG4
SLC10A7
NHEJ1
CAD
ATRAID
STK11IP
SLC5A6
RCE1
DHX34
POLD1
FAM228B
SF3B6
MRPL34
SCGB1C2
NOL11
C19orf48
ABHD8
DDA1
EYA3
SAC3D1
PARD6B
ZNF586
TIGD2
ATP8B3
ATP5MPL
SOCS5
ZNF189
MRPL50
COX14
RPL22
KLHDC10
FEM1A
ZNF773
KIFC1
TESK1
PIGO
PTK6
CRELD2
ALG12
DRG2
BMS1
PGRMC2
OSGEP
APEX1
AP1M1
TSNAXIP1
RANBP10
MIGA2
TMEM141
SERBP1
DTWD2
PTPN4
TVP23B
NUDCD1
ZNF140
ASNSD1
ASDURF
SH2D3A
VAV1
MRPL42
RPA2
LOC100289561
FBXL19
PHF23
GABARAP
EIF3C
EIF3CL
SLC25A23
CRB3
TARBP2
MAP3K12
CCL25
PUM1
HMGB1
USPL1
ZNF585A
IBA57
GGT6
AGA
MYBL1
MYBBP1A
UMPS
TRMT1L
SWT1
SUCO
SMIM13
MFSD8
ABHD18
STAG3
GPC2
PCM1
PABPC1
RABL2A
PSMC5
FTSJ3
LHPP
COPS4
CDK11A
BORCS5
NME1-NME2
NME1
ELAC2
EXD1
CHP1
ZNF260
RPL23A
RAB34
TSTD2
NCBP1
RALGAPA2
RAB8A
CPPED1
MARK2
ASB6
CALR3
C19orf44
CRK
TMEM52
CALML6
LYPD3
C1QTNF6
TBC1D13
PSMD11
VPS26C
TSACC
CCT3
FAM185A
NPAS1
POLR2J3
RPTOR
HBS1L
WDFY2
PDHX
APIP
TMEM205
CCDC159
ZFP1
SRPRB
SUGP1
MAU2
PAIP2
FARP2
NDUFS4
SART1
ZNF324B
MRPS31
MRPL38
DRG1
RANBP3
MYD88
ACAA1
ADCK5
SNRPD1
SLC7A6OS
PRMT7
CSNK1A1
TXNL4B
DHX38
EEF1G
TMED10
TMEM242
HACL1
BTD
MIB1
SHBG
FXR2
GBA
ZNF527
DFFB
CEP104
RAD50
ABI1
FBXL12
FDXACB1
C11orf1
PCP2
XAB2
TMED1
CBR4
CDK5RAP3
ASCC2
PFDN4
RIDA
POP1
SLC39A13
UBE2B
CDKL3
SLC35B4
RPS11
ELMOD2
ZNF573
MEIOSIN
SENP2
SNX1
CIAO2A
ZSCAN32
ZNF174
TTC9C
HNRNPUL2
CARNMT1
PLEKHM3
ZNF461
PEX16
LARGE2
TMEM79
SMG5
DIMT1
GPANK1
CSNK2B
C6orf47
LY6G5B
LUC7L2
FMC1-LUC7L2
FMC1
CCNI
PDCD2
LMBRD1
DNM1L
RDH11
MIA3
OS9
PLCD1
CCNB1
NIFK
CBWD5
KDM8
RRP9
PARP3
TIGD4
ARFIP1
BCL10
SMPD1
ZNF350
SKIV2L
NELFE
RPS16
FAM177A1
SLC16A13
TELO2
CEP131
PTX4
CCT2
ZCWPW1
MEPCE
TBC1D30
GNS
SF3B5
CIPC
YIF1B
KCNK6
TRAPPC3
RPS7
B9D1
FAM71E1
EMC10
MAPK7
AHCTF1
GTF2H5
TMUB2
RWDD1
LZTR1
VHL
ZNFX1
SHISA5
LMF1
KCNJ15
THEM4
FRG2
KRBA1
SMCO1
GCNT7
FAM209A
YPEL3
COL23A1
TATDN2
AADACL4
BSDC1
UBE2F
MTRNR2L2
MSH3
DHFR
MTRNR2L8
MBOAT4
TMEM89
IRAK2
EXTL2
ZNF562
GTPBP6
DUSP6
FAM153B
DEGS2
DBNDD2
PDE11A
SNCG
MMRN2
CTAG1B
CTAG1A
FAM184A
ST20-MTHFS
RABGAP1
TMEM229B
FEM1C
CBX1
ZNF572
COL18A1
TXNRD2
APOA1
TBX6
FAM227B
DTWD1
NUF2
APOBEC3B
PAXBP1
MTF2
BCR
ZNF761
ARHGAP39
BCAR3
LEP
DMAP1
TLR2
SUMO3
SAMD4B
OR4K17
C2orf88
MON2
PRRT1B
ANP32D
SF3A3
PRSS38
STX16
SCCPDH
ACYP2
GSTM5
RFC1
GPRC5C
CNOT3
FAAH
NDUFS7
MED23
SDR42E1
RBPJ
ST6GALNAC6
CEP85
SLC1A7
ACAA2
BAAT
IGFALS
COX16
ADCY10
RPS29
CCDC130
IL21R
PEX3
ADAT2
SLC27A5
YWHAQ
ZNF117
TTLL12
SEM1
TMEM41A
ZNF623
INTS12
GSTCD
RAB37
CALCB
SATB1
SULT1C3
CEP72
PPIG
JMJD1C
RABGAP1L
RBM33
PLEC
IFT88
NDUFB3
FAM126B
TMEM70
ELOC
FRA10AC1
MRPL44
ZNF577
IL36A
GPD1L
NOS3
KMT2A
GDPGP1
CIB1
TTC32
POLE4
MROH7
C19orf18
CYP17A1
DCAF10
NARF
CALD1
DSTYK
NPAS4
TBC1D19
HERPUD2
MAPRE2
ACOX3
SELENOH
ZNF426
TMEM14C
GTF2H2C_2
ZFP30
TMEM43
CHCHD4
CFHR4
GTF2H2
APOL4
ZNF317
CLK4
TRMT44
STX18
GTF2H2C
ENG
TOP3B
DPY19L4
GALNT1
DNAJC25-GNG10
DNAJC25
PRELID3B
PNPLA7
ATP1A1
COMMD2
ADI1
ZSCAN31
ZNF561
POLR3B
CYBC1
TMEM62
RBBP9
NME4
KDM3A
ZNF792
LMLN2
TFPT
PRPF31
RERE
RPS14
GSTA4
CAT
TATDN3
NSL1
SMARCD2
YTHDC2
UTP3
CLDN16
PPIP5K2
LIPA
GIN1
PSEN1
PDCD7
ALG10B
PIK3R1
IPO4
RAD54L2
SLC44A1
FRG1
SLC25A51
GTF3C3
REEP3
TDP2
ACOT13
EIF3F
MAD1L1
THAP11
NUTF2
VTA1
NMBR
SFT2D3
SUPT7L
SLC4A1AP
RPL11
ANKRD54
PARP15
LSG1
EPS8
INTS5
AUH
YJU2
EIF3L
CENPT
MRPL40
HIRA
BAIAP2
ACTL8
FBXO31
ZNF32
AP3S2
YY1AP1
DAP3
SMG8
STAT3
CATIP
REXO4
ADAMTS13
CCDC200
GLO1
ZNF341
MSRA
CDK5RAP1
WDR36
TMEM44
PPP6R1
HTR5A
KDM1A
GCNT3
ITGA4
TEFM
LCN8
SNIP1
DNALI1
THOC5
CAMK1D
FGD3
INO80C
RNF187
DRAP1
C11orf68
SNAP47
TACO1
ZNF841
ESR2
PRIM2
ORC4
MBD5
REN
ZNF829
ZNF568
PPP1R11
GINS1
ZBTB45
COPS7B
DEK
SUPT6H
SDF2
MRPL21
IGHMBP2
SCARF1
SCMH1
JMJD4
WDR74
C3orf14
PSMF1
KANSL3
FER1L5
SLC2A7
ILF2
SLC41A3
ATP5MC2
USP30
LARP1
SGCE