ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX065547 | 293
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◣ SRX065547: 293

◢ SRX10976388: 293

◢ SRX10976389: 293

◢ SRX150671: 293

◢ SRX17826856: 293

◢ SRX17826857: 293

◢ SRX17826858: 293

◢ SRX17826859: 293

◢ SRX17826860: 293

◢ SRX17826861: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX1799522: CD4+ T cells

◢ SRX1799525: CD4+ T cells

◢ SRX1799528: CD4+ T cells

◢ SRX1799531: CD4+ T cells

◢ SRX671999: ES cells

◢ SRX672001: ES cells

◢ SRX672002: ES cells

◢ SRX9823127: GM12878

◢ SRX9823128: GM12878

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX11220464: HT-29

◢ SRX11220465: HT-29

◢ SRX11220466: HT-29

◢ SRX1925740: iPSC derived neural cells

◢ DRX402530: K-562

◢ DRX402531: K-562

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX5457586: K-562

◢ SRX5457587: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX12813813: MCF-7

◢ SRX12813814: MCF-7

◢ SRX1497516: MCF-7

◢ SRX7030916: MCF-7

◢ SRX7030917: MCF-7

◢ SRX7030918: MCF-7

◢ SRX7030919: MCF-7

◢ DRX402534: MYL

◢ DRX402535: MYL

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

KCNJ15
SMCO1
BSDC1
APOA1
C19orf18
AADACL4
GTPBP6
ITGB3BP
EFCAB7
DEGS2
YPEL3
TBX6
MAPRE2
KRBA1
MTRNR2L8
UBE2F
PDE11A
RABGAP1
ZNF572
TMEM229B
FAM184A
ZNF829
ZNF568
PTDSS2
ANO9
GCNT7
FAM209A
ZFP30
TMEM89
RABGAP1L
SAMD4B
RBBP5
ZNF623
YWHAQ
SUMO3
PRSS38
STC1
SF3A3
MTF2
THEM4
DUSP6
ZNF324B
GALNT1
EXTL2
DHRS2
DBNDD2
COL18A1
DKKL1
KRTAP5-1
TTI2
ZNF32
NUF2
SSBP1
OPRL1
LKAAEAR1
ZNF772
MTRNR2L2
MSH3
DHFR
DISP1
CANT1
ZBED9
TMEM14C
LCN8
MSRA
CBX1
ACTL8
MTR
ARHGAP39
PRRT1B
COL23A1
TMEM132A
C2orf88
SDR42E1
COX16
AURKAIP1
ZNF117
SLC1A7
LARP1
TEX50
CALCRL
RBBP9
AMD1
CDK19
SLC33A1
RPS29
ADCY10
GRAMD4
RERE
OR4K17
ZNF577
IL36RN
IL36B
CAT
RNF217
DNAJC25-GNG10
DNAJC25
UTP3
DNAJB12
FAM234A
ANP32D
TATDN2
MROH7
GBA
RNF187
IGFALS
HLA-E
RCAN1
MYO1H
TBC1D19
CFAP298-TCP10L
CFAP298
TTC32
SPANXC
ATP5MC2
RPL37
CALD1
JMJD1C
GALNTL5
PAXBP1
MMACHC
CCDC163
TRAPPC8
TLR2
ZNF20
CFHR4
GTF2H4
ZSCAN22
ALG14
ELAVL2
TMEM44
CD14
ISY1-RAB43
ISY1
MBOAT4
TMEM242
TFPT
PRPF31
C3orf14
RAB30
GABRR2
PEX3
ADAT2
WDR11
MED23
COX7A2
ZMPSTE24
CEP85L
CNN2
TMEM259
NEMF
ELFN2
ZNF134
GABPB2
TRMT11
GRPEL2
APOBEC3B
MMEL1
SUPT7L
SLC4A1AP
MITD1
CLEC12A
SLC45A4
SULT1C4
FAM13A
FAM13B
UFC1
RBM33
PPP1R11
MLPH
LPIN1
RNF125
COA6
NUP107
SPANXB1
NOS3
CRYAA
CRYAA2
ZNF391
GLIPR1L2
CNIH4
LRCOL1
TATDN3
NSL1
SAR1B
PCDH15
HEATR1
RPS7
DCP1A
ILF2
FABP6
KDM3A
ENG
CCDC59
BORCS6
MNAT1
PPRC1
CEP85
REXO4
ADAMTS13
CCDC120
TRMT5
SLC38A6
SNRPD3
GUCD1
GTPBP3
ANO8
TBL1X
EIF2S1
ATP6V1D
MAMDC2
OSGEPL1
NME1-NME2
NME1
PDCD6IP
TRIP4
TEFM
ZNF546
TACO1
BRF2
ZNF165
B4GALNT2
CDC5L
FAM153B
EIF3F
ATG5
DMAP1
IRF2BP2
DPYSL2
PNMA2
RCAN2
DSTYK
MOB4
ZNF501
NDUFS7
SKP2
LMBRD2
RPS13
SLC25A53
EIF2D
NDUFB3
FAM126B
PAFAH2
TIGD2
ATF7IP
LOC102724265
UBR2
ZNF571
ZNF540
SPAAR
CPPED1
NEK7
POLR3B
GSTA4
KRTAP10-1
ZNRF4
CTAG1B
CTAG1A
TTC26
CLTB
NOP16
HIGD2A
SAMD1
ZNF561
SNRPE
SNCG
MMRN2
LUC7L2
FMC1-LUC7L2
FMC1
MAD1L1
NAT10
REEP3
GASK1A
CDYL
CNGA1
MAN2A1
HDAC2
SCMH1
ZNHIT6
ZNF292
TPK1
GPRC5C
AASDH
LIMK1
SYT1
PBX3
PDE1A
CCDC107
OSGIN1
ZNF841
IARS1
POLN
HAUS3
TMEM41A
CYCS
RPS18
VPS52
B3GALT4
TMEM72
MRPS16
LOC100129484
RAB18
SNIP1
DNALI1
SEC23B
WDPCP
MDH1
GADD45A
NSA2
GFM2
CCNI
RPL5
AP3S2
NCOA7
ITFG2
ATG4C
ZNF461
HIGD2B
BBS4
CCDC33
SLC2A7
RUNDC3B
IL1RAP
VAV3
IL21R
SELENOH
INTS5
CACNG1
SF3B5
PLCH1
GYPC
YJU2
LOC100421372
HSPA14
CDNF
FRA10AC1
NME4
CCNC
RPL7A
MED22
SURF2
SURF1
TMEM107
TOMM20
SLC24A1
INTS14
AHCYL1
FAM199X
DNM2
HDAC8
IL36A
DCT
LRRC49
THAP10
GORASP2
ACOX3
TRMT44
PACSIN2
SLAIN1
COMMD2
UBE2L3
RIMBP3C
RIMBP3B
FOXO3B
TM2D1
ZNF790
ZNF383
ZNF585A
PTGS1
SLC43A2
YTHDC2
ZSCAN30
TMBIM6
PRIM2
PLEKHM3
H4C15
H4C14
MRPS23
SGMS2
UBOX5
FASTKD5
MRPS18C
HELQ
KLHL20
PPIP5K2
GIN1
SLC35E2A
TARS3
KRR1
PLEKHA3
FKBP7
BCAR3
VTA1
NMBR
LSG1
SLC35A3
SMG7
CSTF2T
PPDPF
SCUBE3
HTRA2
DQX1
TBC1D32
FEM1C
RPS15
TXLNB
PPIL3
NIF3L1
PLK2
MAGEA11
BAAT
TUT1
SLITRK5
PARPBP
NUP37
DHRS13
COMMD6
UCHL3
BCL2L13
C10orf88
DHTKD1
NUDT15
RPL27
TMEM79
SMG5
TTLL1
GTF2H2
GTF2H2C
RBM45
AARS2
AKT1S1
KRTAP19-2
DRG2
PIH1D2
NKAPD1
SLC39A6
COL4A5
COL4A6
SPAG9
IFT88
DEK
SRP9
POLDIP3
TPM4
DYRK4
FBXO44
FBXO2
UTP25
SEM1
WBP1
INO80B
ABCG1
ZBTB25
ZBTB1
ARF1
TSPAN2
ARID1A
MED18
TMEM101
CEP120
MIS18BP1
CSTF1
AURKA
EFCAB10
C1orf167
EPRS1
TMEM208
LRRC29
ZMYND11
SPRR2F
ZSWIM7
TTC19
HACL1
BTD
CCDC150
EMILIN1
GSTM5
SAMD4A
RAG2
IFTAP
ASB13
CALCB
SNRPB
SNRPD1
DNAJB13
TMEM30A
TTC3
TSTD3
EIF1AD
BANF1
ECHDC1
KDM6B
RAB5IF
MAST2
PPIG
PIKFYVE
RPA2
RSPH3
DEDD
TMEM275
HTR3A
TNPO3
STK32C
VPS35L
PPP3CA
ATP1A1
THOC5
TIAM1
HAX1
SLC35B1
ZNF610
CCDC90B
ALKBH3
RALBP1
AIFM1
IRAK2
ARID3B
GCGR
MRPL1
TSSC4
POLG
MAGOH
CREM
CRNKL1
CFAP61
SLCO1A2
B3GALNT2
C1orf198
BRAP
ACAD10
NKAP
EPHA3
ARHGAP24
RPS14
WDR74
SMIM13
EFHD1
RPTOR
IRF9
SPATA5
NUDT6
ARMCX5-GPRASP2
SPDEF
ARMCX5
NR1H3
ACP2
POLR1H
CFAP20
DCLRE1B
AP4B1
PARP2
TMA16
RWDD1
SNAPC5
FCMR
ATR
QRICH1
CUL5
PARK7
BRF1
PACS2
TMEM205
CCDC159
VPS33A
SNRNP35
CEP350
RANBP17
SLC17A5
DDX41
AQP10
ZNF56
RARRES1
RIMKLB
THAP4
ATG4B
ATP8B2
NTPCR
FAAH
REN
VPS13B
KHNYN
CBLN3
MTO1
ZSCAN31
RAB6D
ZNF791
ZNF490
ZKSCAN3
ATP5F1B
GRAMD1B
LSM5
AVL9
ZNF302
PDGFD
NTN1
C16orf54
FAM228B
SF3B6
RAD51AP1
C12orf4
GLI1
INTS12
GSTCD
PPP6R1
SCAND1
SREK1IP1
CWC27
NEK4
TMEM128
MAP3K7CL
CCT8
ZNF57
CC2D2B
CNIH3
TRUB2
COQ4
PERM1
STX16
HTR5A
KLRD1
TSFM
PUS10
PEX13
ZNF527
ZZEF1
CYB5D2
BANP
CCDC174
RGPD2
RGPD1
NQO2
MRPS31
RTTN
MRPL48
LTA4H
LTN1
S100A5
S100A4
S100A3
AP1G1
POMGNT1
LURAP1
OSGEP
APEX1
HMGB1
USPL1
ZBTB45
CDC73
GMEB2
FDXACB1
C11orf1
SCML4
ZSCAN25
GTF2B
HNRNPH3
PBLD
HMGCR
PROS1
ERCC6
TFIP11
ALG10B
CBWD5
CBWD3
SRSF11
LRRC40
LONP1
CATSPERD
NUP42
TLE3
C6orf118
PDCD7
SLTM
INTS9
HMBOX1
TTLL12
SMG8
MTIF2
C8orf37
TBCB
CCDC130
CCDC97
SDHAF3
PRRG2
NOSIP
MRPL42
CARD8
RBM7
C11orf71
SRCAP
LOC730183
PPP3R1
TRAPPC2
OFD1
TPR
ODR4
MTOR
SASS6
N6AMT1
TYW3
CRYZ
COA7
SHC3
METTL7B
TMEM43
CHCHD4
SPSB1
FLYWCH2
GJB7
CHID1
MAP7D2
AAR2
RNF215
TXNDC9
EIF5B
CBWD2
FAM50B
CNPY1
TDP2
ACOT13
ESR2
GALK2
COPS2
COG2
TTC38
PKDREJ
AJUBA
SRRM1
WDHD1
SOCS4
GPATCH3
ANO6
SRA1
ZUP1
LMNTD1
MLIP
ST6GALNAC6
COPS4
TIPARP
SLC35A1
MRPL40
HIRA
CCDC200
KRTAP10-9
HECTD1
CNTRL
C5
APOL2
ZFYVE28
RAMAC
MATK
SRP54
MAP3K7
INSYN2B
SH3RF2
ZNF566
INKA2
DDX20
CYP27A1
ARMC7
TCTE3
ERMARD
ZBTB2
GSTP1
CHEK1
CCDC43
PPP2R3A
NMT2
MAGI2
PNPLA7
RPAP2
GLMN
RBBP6
GALT
DENND2C
RPL11
EPB41
ATG101
FBXO22
PFKM
SENP1
PIGL
NCOR1
C6orf226
ZNF2
DARS2
CENPL
ARHGEF16
LONRF2
RANBP2
FAF1
ZNF589
ZNF260
IRAK1BP1
ZNF562
SLC44A1
TUBB
MDC1
CD2BP2
PI4K2A
KIF12
ALG10
ZNF518A
TMEM167B
ZNF286A
EP400
DLC1
PCDH9
PRC1
LRRC14B
GPR176
ZNF317
TOR1AIP2
TOR1AIP1
FBXO31
RMND1
ARMT1
GRM4
TTC14
TIMM17B
PQBP1
ZNF385A
ZNF331
ZBTB8OS
RBBP4
TOMM20L
ALG9
PLAC8
MRS2
SLC9A3R2
SMIM35
TRIM38
CCNL1
CYB5R4
DROSHA
C5orf22
PNISR
RNF207
ATP1B1
FLRT3
PSG5
WDR36
DDX18
STAU1
DHX16
FBXW7
DDX27
USHBP1
AGPAT3
TRMO
IFT172
TARM1
NUP54
MTBP
MRPL13
SEC22B
DHX8
SELP
PDE2A
PNPO
UBXN4
SLC10A7
H4C4
SYNE1
H2BC6
STX18
SNX17
EIF2B4
TNFRSF1B
CD55
UFL1
HEXA
CTH
FAM124B
BAIAP2
MRPL21
IGHMBP2
TGFBR2
ARHGAP19
DNAJC21
LRFN3
SS18
DCAF10
POLR2J3
PDE12
SLC3A2
TXLNG
SOBP
GLIS2
RFC1
NPAS4
LRP6
INTS2
CRBN
RETSAT
C6orf89
TBRG4
NUP133
AQP2
CDK14
FOXP1
AGBL3
SARS2
MRPS12
SATB1
NECAP2
RPS3A
RPS26
NUP205
RPL22L1
CCDC124
CHCHD6
C4orf48
CYP17A1
ZNF408
ARHGAP1
KDM1A
TEX46
PES1
ZNF570
ZNF569
EIF4E
ZC3H10
RPL41
NOL8
CENPP
DHDDS
BASP1
RBM26
SCCPDH
RBPJ
SESN1
CEP57L1
ZMYND8
EVPL
DUSP12
CMPK1
FN3K
RNF182
DUX4
STAT3
SUGCT
MPLKIP
DDX1
SELENOT
CLASP2
TAF10
PPP6R3
ST7
LYRM2
MMP20
PLEKHH3
CNTNAP1
CCR10
ACY1
CLUAP1
NOL11
C16orf90
SCYL3
ZNF484
EFCAB2
HINT3
FAN1
DUS2
DDX28
ZNF14
SIAH1
RPL37A
GBX1
SLC25A51
PARP15
PHIP
DPP8
PTPN4
CYB561D1
ZNF254
EFR3B
PLVAP
NEUROG1
ACYP2
C1GALT1C1L
KIAA1191
ARL10
C19orf12
SNX8
PPARGC1B
PITHD1
CLIC5
FBXO16
ENPP4
FZD3
GTF2H2C_2
ASNS
FAM160B1
EIF5A2
RGL2
MIDEAS
COMMD9
EIF4G2
NFKBIL1