ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX065554 | U2OS
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX10976388: 293

◢ SRX10976389: 293

◢ SRX150671: 293

◢ SRX16676305: 293

◢ SRX16676306: 293

◢ SRX17826856: 293

◢ SRX17826857: 293

◢ SRX17826858: 293

◢ SRX17826859: 293

◢ SRX17826860: 293

◢ SRX17826861: 293

◢ SRX22117740: 293

◢ SRX22117741: 293

◢ SRX22117742: 293

◢ SRX22117743: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX1799522: CD4+ T cells

◢ SRX1799525: CD4+ T cells

◢ SRX1799528: CD4+ T cells

◢ SRX1799531: CD4+ T cells

◢ SRX671999: ES cells

◢ SRX672001: ES cells

◢ SRX672002: ES cells

◢ SRX9823127: GM12878

◢ SRX9823128: GM12878

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX11220464: HT-29

◢ SRX11220465: HT-29

◢ SRX11220466: HT-29

◢ SRX9977682: HUVEC

◢ SRX1925740: iPSC derived neural cells

◢ DRX402530: K-562

◢ DRX402531: K-562

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX5457586: K-562

◢ SRX5457587: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX12813813: MCF-7

◢ SRX12813814: MCF-7

◢ SRX1497516: MCF-7

◢ SRX7030916: MCF-7

◢ SRX7030917: MCF-7

◢ SRX7030918: MCF-7

◢ SRX7030919: MCF-7

◢ DRX402534: MYL

◢ DRX402535: MYL

◣ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

MAPRE2
GTPBP6
ITGB3BP
EFCAB7
AADACL4
MTRNR2L8
BSDC1
COL4A5
COL4A6
SUPT7L
SLC4A1AP
KCNJ15
C19orf18
IRF6
MTRNR2L2
MSH3
DHFR
ZNF408
ARHGAP1
GABPB2
GALNT1
KDM3A
ATF7IP
RBM33
YPEL3
TBX6
KRBA1
PAXBP1
LGALS3BP
TMEM79
SMG5
CDIPT
RPS26
THG1L
ZNF571
ZNF540
CANT1
DHRS2
CALCRL
UBB
PRPSAP1
ARID1A
CCL20
RPH3AL
TCTEX1D4
BTBD19
RPL27
HDAC8
TFPT
PRPF31
AHCYL1
PIH1D2
NKAPD1
KAZN
CELF1
CCNI
NDUFB3
FAM126B
PLA2G2A
CLPTM1
CELA2A
GTPBP3
ANO8
LRIG2
AURKAIP1
MAP3K14
SSBP1
RGPD2
RGPD1
RHOQ
ATP6V1E2
PPIL3
NIF3L1
PPP6R1
RCAN1
SERPIND1
RBBP5
INTS5
ZDHHC6
VTI1A
ARTN
POLR3A
RPS24
EVPL
ZNF577
NOL12
ABRACL
SLC39A6
GTF2H4
NEK2
LY6K
ISY1-RAB43
ISY1
CDK12
KDM5C
RAG2
IFTAP
ARHGAP39
EIF2S1
ATP6V1D
MAST2
APOA1
RAD51AP1
C12orf4
DUSP6
ZNF302
ZNF383
CREM
PDE12
IL17F
TNFRSF1B
SIRT3
PSMD13
MRPS33
TBL1X
UBE3B
SLFN12
RABGAP1
ARHGEF2
CD2BP2
PRSS41
GBA
ZNF585B
MMACHC
CCDC163
BCL10
DNAJC16
CASP9
FAAP20
ELFN2
SLC33A1
NBPF1
AKIRIN1
COX7A2
WDR83OS
WDR83
MAN2B1
BAIAP2
HAX1
SNIP1
DNALI1
AP1G1
STX1A
TPM3
ITFG2
IGFL4
GCNT7
FAM209A
B4GALT3
TTC26
SF3A3
MTF2
ERICH4
DMAC2
ZW10
AAAS
LACTBL1
GPC6
THEM4
ZMPSTE24
ILF2
COIL
TRIM5
TRIM22
ZNF750
NME1-NME2
NME1
LRP6
PPRC1
DYNLRB2
ARMCX5-GPRASP2
ARMCX5
TMEM242
EPRS1
C3AR1
ARID3B
KCNH4
HCRT
EIF3F
SCMH1
NCOA7
STC1
LIMK1
SELENOH
IFI6
YWHAQ
COX16
NEMF
COPS4
WDR55
TNPO3
MICALL1
MTR
STK40
ZNF572
CD14
AKR1A1
SNRPD1
RFFL
LMNA
DDX42
CCDC47
NID1
PARP15
YTHDF2
TYSND1
HEMK1
C3orf18
CASP10
GLIPR1L2
CYB561D1
AIFM1
MRPL54
APBA3
JMJD1C
CHMP7
VPS35L
CEP120
USO1
COL18A1
TPK1
PHC2
C1orf174
PLEKHG1
MXI1
PRRT1B
RERE
MRPL1
PACSIN2
ZNF790
RABGAP1L
RPL11
INTS2
CNGA1
RNF125
TTC39C
LSG1
RMND1
ARMT1
ZNF226
HEATR1
FNTB
RNF207
DNAJB12
MED11
PLAAT2
TTLL2
RPA2
ZNF793
KRT19
TIMM10
REXO4
ADAMTS13
SLC25A53
KDM6B
PHF5A
ACO2
ZNF335
NR1I2
ZNF56
INKA2
DDX20
CGGBP1
C3orf38
LIG3
CDH1
CCNC
MTBP
MRPL13
MROH7
TBC1D19
EIF1AD
BANF1
MIDEAS
SLCO1A2
AGTPBP1
PLEKHH2
STAT3
TRUB2
COQ4
TUFT1
SHOC2
BBIP1
ITPR3
SH2D5
BEST4
TRAFD1
CCDC130
PLK3
RIMBP3C
RIMBP3B
RSPH3
PEAK1
HMG20A
PLAU
GAPDH
UFC1
GPX1
UQCRC2
PSMB5
ZSCAN4
TMEM107
CLASP2
SNX27
TXNRD1
CEP162
NYX
CPN2
NHLH1
TUT1
TRMT11
EIF5A
CALCB
ZBTB40
RBM25
ZNF331
MIS18BP1
RCC2
ASAP3
NOL8
CENPP
DYNC2I2
SMG9
SLC35A4
APBB3
TMEM247
SCT
CDHR5
CRTAM
RBMS2
GTF3C5
FEM1C
CLCN3
CD24
MTMR11
NRL
DCAF11
RCAN2
DUSP14
FRRS1
AMHR2
CCDC97
PSMB7
TRMO
SIN3B
BNIP5
ANKRD1
BORCS7
TIMP4
RFXANK
BORCS8
PCNP
USP9X
MTHFD1L
FAM184A
CSTF2T
ZNF461
NME7
BLZF1
C19orf25
CLN3
APOBR
HAPLN2
RHOD
ZNF623
ZNF829
ZNF568
PRKCSH
CCDC151
TIMM9
KIAA0586
ZNF221
ZNF566
AASDH
TBC1D22A
CASP3
TNFRSF1A
ELSPBP1
BSPH1
VGLL1
ZSCAN30
PXT1
KCTD20
WSCD1
TCIM
KDM1A
TEX46
ZSCAN22
SCYL3
KCTD9
CDCA2
SLITRK5
FAM89A
RCN1
GORASP2
ZKSCAN2
EFHD1
TRMT1
NACC1
POMGNT1
LURAP1
ZNHIT3
NAV2
HEBP2
OCIAD2
TTC31
CCDC142
JUN
PGLS
ZSCAN23
NTN1
RIN2
MNAT1
XPNPEP3
ST13
SMG8
BNIP1
SESN1
CEP57L1
UIMC1
TRAPPC8
TM2D1
SUGP1
MAU2
STAT6
CCNG2
SCARB1
SLC7A11
GAL3ST2
KLHL34
SYT16
FRA10AC1
RPS3A
IRF9
ADAT1
DLX4
ZFP30
WDR11
INPP5A
CCNY
UBQLN1
TBCB
POLR2I
OVOL3
ADRA1A
EXPH5
PLS1
SLC39A9
ERH
CLASP1
EFCAB14
TFB1M
MYO1B
PPIP5K2
GIN1
SLC41A3
RBL1
ZRANB2
HOXB13
SUMO3
UTP3
PRPF18
FAM234A
TOMM40
GPATCH3
CTSB
ZNF300
GNA12
CD320
TIAM2
C6orf118
TBC1D1
FBXO46
RIPPLY3
FCRLA
MSRA
CHPF2
CPD
ABCF2
PEF1
MRPS18C
HELQ
SGMS2
NUDT5
CDC123
SULT1C2
NOP16
HIGD2A
EIF3E
NUDT9
NFYC
PLPP5
PSMD3
ARMC1
CMSS1
RAI1
IAPP
NDUFS7
MED18
SPSB1
TRIM25
CSNK1E
EIF2AK3
SFXN3
PDZD7
RTL9
ISLR
BANP
SMIM12
ARHGEF18
PEMT
RGL2
STBD1
CACTIN
FERMT3
CARHSP1
CELF3
TRPV2
RIIAD1
AQP12B
TTLL12
LZTR1
SNRPD3
GUCD1
ALG14
SIRT4
C19orf48
PREPL
CAMKMT
ZXDC
ROCK1
KLF6
SLC1A3
TTC32
VPS13B
ZNF518A
PES1
HBS1L
NIP7
COG8
LRRFIP1
SH3BP4
TEFM
RPS27A
CLHC1
RASL10B
MRPS23
SUGCT
MPLKIP
OPRL1
LKAAEAR1
SPEF2
NHSL1
RPS7
TIGD1
EIF4E2
UFD1
CDC45
RPL26
TXN2
EHD2
GTF3C3
OSBPL8
PHACTR4
ORC2
POLD4
RUFY4
SPR
RETREG2
CNPPD1
HACD2
KAT7
PLK2
CLDN7
UBE2F
WBP1
INO80B
SOD2
TMBIM1
WTAP
TTC14
SNX3
FBXO7
ABCD2
ZNF2
NRDE2
SGSM3
FURIN
PIP5KL1
PDE11A
RBM45
CLTC
NEURL4
PDZRN3
C16orf92
IFT46
TEF
ECPAS
PIK3CB
PUS10
PEX13
ZNF165
ZNF14
NECAP1
KIAA0319
ALDOA
CES3
APOL1
TTC9B
PSG9
PDXP
CCDC59
CEP85L
CNN2
TMEM259
CCDC107
TMOD1
SF3A1
CCDC157
STX12
HSCB
CHEK2
LIMCH1
ADAMTS16
CALD1
PRKAG2
CBR1
IRF2BP2
CNIH4
PNISR
RPS14
YJU2
ZBTB45
KRTAP10-9
RPS18
VPS52
CZIB
CFAP43
AKR1D1
DUX4
DNAJC25-GNG10
DNAJC25
INO80C
GABPA
ATP5PF
CCDC174
TUBB
MDC1
FDXACB1
C11orf1
ZNF708
LTBR
UTP18
MBTD1
KLK10
SCNN1A
CLK4
STX18
DLAT
ZNF585A
TMEM128
CERK
TMEM69
GPBP1L1
C1orf158
HAUS6
KIF20A
BRD8
WASF1
CDC40
TRIP10
KMT5C
SLFN5
RUVBL1
IPO13
ZNF260
ARMC7
CENPA
GABARAPL1
SULF1
NHS
CDK5RAP1
SFSWAP
OSGEPL1
RHOT1
ZBTB8OS
RBBP4
SPATA1
GNG5
S100A11
CMBL
RIPK4
ZFR2
TMEM89
CPPED1
CCDC115
RIF1
SASS6
COPS7A
GLCE
CLCN4
POLR2J3
ARID5A
USP22
UBXN7
ZFC3H1
THAP2
ZNF24
CYP27B1
METTL1
EEF1AKMT3
GABARAPL2
SLC25A44
NKX3-2
AKR1B15
PEX3
ADAT2
IPO4
POLG
DDX41
TAOK3
CRTAP
LIMA1
CTH
WASF2
G2E3
PLEKHG2
MAN1C1
EPB41L3
MOB4
MRPL48
TIAM1
MEGF8
PIGL
NCOR1
ZBTB25
ZBTB1
ABR
ADGRL1
CEP126
ANGPTL5
ACSL1
DLGAP4
BRCA1
DNAL1
LRP10
TMEM53
ARMH1
RFTN2
DMAP1
UBOX5
FASTKD5
MEIG1
TIMM50
CDK14
IGF2R
PTPA
CRAT
GCNT2
DCLRE1C
PPARGC1A
IFI44L
ABI3BP
TMEM222
STK32C
DHX32
SRSF4
CORO2A
SPRR2F
PMF1-BGLAP
PMF1
NCF4
SRSF1
ATXN7L3B
GTF3C6
LRRC27
SOCS6
SLC27A1
TARS3
DHX16
ATG4C
DDX46
PPOX
DYNC1I2
ANKRD17
MRPL27
EME1
RPF1
CDK5RAP2
FAM222B
HSPA5
FUCA1
PDE10A
THOC5
POLR3E
MRPS14
SLC35E2B
TES
CALM2
AP3B1
LYPLA2
TNFAIP3
SBNO1
TXNDC17
KIAA0753
ADIPOR1
HTR3A
PAFAH2
TMEM101
TPD52L1
FOXO3B
MTUS1
DOCK3
AP2M1
CHRNA9
RPS29
LCN8
NDUFS3
KBTBD4
CD248
MAD2L1BP
GTPBP2
APOL2
MYEOV
INPP4B
TAOK2
GALM
GTSF1L
TM9SF4
TAF12
ZBED9
LRRC49
SRCAP
LOC730183
SECISBP2
ACP3
DONSON
CSF3R
FHL1
SULT2A1
CDC42EP1
LARP6
ZSCAN25
DNAJC11
TRIM7
PIKFYVE
THOC2
UBL7
SMARCD1
ATP2C1
FOXP4
POLR3F
DZANK1
HROB
ZNF573
CSTF3
HELZ2
UTS2R
GHDC
TUSC3
SLC6A18
TRMT61B
ZBTB20
PRDM1
SPNS1
KLRC2
ASB5
KLRC3
ZNF791
ZNF490
MUC1
MCCC1
PDE4DIP
S100A13
VPS45
HIRIP3
CDK11B
NAA38
NSUN3
DHFR2
TMEM88
CYB5D1
MBNL2
PHLDB2
UPK3A
LMNB2
CHKA
BCAP31
ABCD1
S100A1
ZNF215
CTSK
SEC16B
BRD4
CASQ2
OR2D3
HEXIM1
PTDSS2
ANO9
WDR5B
TNFRSF19
SH2D3C
SMAD3
IFIT3
AGPAT4
RBM42
SEMA4A
F2RL1
ARHGAP18
DDX3X
PLA2G6
PRSS23
CSDC2
ZNFX1
SPAAR
RAB30
NEK4
TAF13
TMEM138
CYB561A3
AARSD1
FAM124B
CD164
ACTA1
DSC2
SPON1
XKR3
RAB40C
HDLBP
PLCD3
ACBD4
HIBCH
DGKD
FAM199X
USF1
SCGB1A1
MBOAT4
C18orf21
PDCD6IP
QRICH1
DNAJB4
BCL2L13
PDE4B
FGD4
GLI1
MED16
USP54
ZBTB7B
CACHD1
DDI2
ORAI3
ASXL3
CHST4
TRIM10
CCDC74B
ZBTB8A
SELENOP
TIMM22
KIF2C
SCP2
SPHK2
RPL18
FAM83E
PSMD8
NAPA
RIMKLB
LMNB1
GP5
CDYL
ASF1A
GDAP1
GADD45A
IREB2
CMPK1
DHDDS
SLC4A8
KRTAP10-6
CHD4
GALNT6
DNPEP
WDR75
CARS1
GBP2
RPL23A
RAB34
SYNJ2BP-COX16
SYNJ2BP
VWA5A
APOBEC3G
PPIG
CACNG1
RCC1
DNAJC6
PPIL4
ZNF764
ACBD5
LRIF1
CENPW
COA3
CNTD1