ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX7030917 | MCF-7
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX10976388: 293

◢ SRX10976389: 293

◢ SRX150671: 293

◢ SRX16676305: 293

◢ SRX16676306: 293

◢ SRX17826856: 293

◢ SRX17826857: 293

◢ SRX17826858: 293

◢ SRX17826859: 293

◢ SRX17826860: 293

◢ SRX17826861: 293

◢ SRX22117740: 293

◢ SRX22117741: 293

◢ SRX22117742: 293

◢ SRX22117743: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX1799522: CD4+ T cells

◢ SRX1799525: CD4+ T cells

◢ SRX1799528: CD4+ T cells

◢ SRX1799531: CD4+ T cells

◢ SRX671999: ES cells

◢ SRX672001: ES cells

◢ SRX672002: ES cells

◢ SRX9823127: GM12878

◢ SRX9823128: GM12878

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX11220464: HT-29

◢ SRX11220465: HT-29

◢ SRX11220466: HT-29

◢ SRX9977682: HUVEC

◢ SRX1925740: iPSC derived neural cells

◢ DRX402530: K-562

◢ DRX402531: K-562

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX5457586: K-562

◢ SRX5457587: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX12813813: MCF-7

◢ SRX12813814: MCF-7

◢ SRX1497516: MCF-7

◢ SRX7030916: MCF-7

◣ SRX7030917: MCF-7

◢ SRX7030918: MCF-7

◢ SRX7030919: MCF-7

◢ DRX402534: MYL

◢ DRX402535: MYL

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

MTRNR2L2
MSH3
DHFR
DUX4
MTRNR2L1
FRG2C
KRBA1
EIF2D
KCNJ15
FAM227B
DTWD1
SMCO1
COL23A1
FRG2
CNOT3
PSMD6
MTRNR2L8
BCAS4
PFDN4
THEM4
POLR2J3
BMP7
SMARCD2
B4GALT7
KMT2A
MUC12
KDSR
STX16
IQSEC3
SRRM3
ZNF217
N4BP3
TPTE
FZD1
WWOX
SEC13
GBA
ZNF341
CHD1L
PRKAB2
NCOA3
SLC24A1
INTS14
DCLRE1B
AP4B1
GNAL
RAB37
PUS7
CTNNB1
KAT6A
AP4E1
TRIM3
SMG8
NOXA1
TBX2
DPY19L4
NSFL1C
TSEN15
GSTM1
IGFALS
GTF3C3
OAZ3
MRPL9
SLC39A13
NFAT5
ACSF3
NOTCH2NLA
MRPS23
CRBN
CALM1
PREX1
ATP1A1
LGR6
SCCPDH
ATXN7L1
HTR5A
TPM1
RINT1
GSTM5
CFHR4
GTF2IRD2B
TTLL12
POLR3B
OPA1
NOTCH2NLB
PRRC2B
ANKRD36C
USP32
CRYBG1
DEGS2
RBBP5
DGKZ
USP3
NEDD9
CUX1
ZNF76
ZNF783
NOTCH2NLC
CLUL1
ARPP19
MRPL1
ZNF398
GCNT7
FAM209A
ANGEL1
ATP6V1FNB
FAM207A
PEX3
ADAT2
SLC44A1
MKRN2OS
MKRN2
HOOK2
EIF3F
GNB2
C18orf25
SSBP2
TXNRD2
FRA10AC1
USP30
BCL11B
RBBP8NL
NME1-NME2
NME1
DSTYK
KCNH6
PPP6R1
SGCA
BRD3OS
TEX14
FAM153B
DRAP1
C11orf68
TRIM37
MRPL40
HIRA
LRRC37A3
ZMYND8
ARHGEF1
CADPS
ARFGEF2
FUT1
FGF21
NFYB
LRP12
EXOC2
TRIB1
METTL9
RMND5B
FAM133B
POLR2J
PRKAG2
ADPGK
LTBP2
PPM1D
ARHGAP39
ZNF860
OSBPL10
DCP1A
SNRPB2
AP1G1
PDAP1
BUD31
BPTF
EPG5
PRRT1B
ALG10B
PNPLA7
ZCCHC4
ZNF282
APPBP2
FOXK1
MRPS31
ASNS
VPS37D
SLC39A4
CPSF1
WWP1
RNASEH2A
PRDX2
ATR
ZNF212
C7orf26
CNOT6
MOCS1
DHRS13
SRI
RBM48
PEX1
PRELID3A
SDK1
ITPK1
NCAPH2
LMF2
GPRIN2
TBC1D19
GFI1B
TSC1
HECTD1
SKIL
KRTDAP
GNAS
HMGB1
USPL1
ZNF317
MAN2C1
AGK
ARHGEF12
PARD6B
PARP10
GRINA
SSBP1
GET3
BANP
TRIP4
C3orf14
CMTR2
PTPRN2
HEATR6
UTP3
ZNF609
XXYLT1
SLC37A4
ATP8B1
REXO4
ADAMTS13
PPP1CC
RGS9
NCBP3
MIS18BP1
RPS7
SF3A3
KANSL3
FER1L5
TNFAIP2
RAD51C
AMER3
MON2
USP15
DDX59
SLC27A2
SUMO3
ZKSCAN2
ERVW-1
GPATCH1
OSBPL1A
LRATD2
ALDH5A1
PRELID3B
BMS1
MYL12B
USP8
LSMEM1
STX18
ADRM1
C12orf73
VPS28
TPBGL
RIIAD1
NUF2
ATAD2
FAM3C
CTDSP2
PPP5D1
CALM3
RBL1
EPS15
TESMIN
COLEC11
GLIPR1L2
VWA8
POFUT1
PLAGL2
ZBTB7C
KDM3B
OTUD7B
BCAS1
ZFAND4
CYB561D1
IL17D
AURKAIP1
DNAJC11
UCHL5
RO60
NUDCD1
DBNDD1
GAS8
SLC33A1
RRP15
SRRT
PPM1A
ATMIN
KCTD3
SCAMP5
GTPBP6
LSS
ANKRD40
ETFDH
C4orf46
RRP8
ILK
LYSMD2
TMOD2
KLC1
SCARF1
RILP
NOTCH2
UPK3BL1
IMPACT
USP46
TMEM121B
TBX4
DUSP6
TDP2
ACOT13
SNRPE
CDC25B
CENPB
DRG2
LRFN2
CELF6
CIB3
NOL11
HIPK1
ANKS6
CCDC59
CLTB
LSM5
AVL9
NUP107
FAM102B
ASB6
NOM1
FECH
CEBPA
HES1
GIGYF1
DVL3
SEC22B
ZNF425
VRK1
HMGN1
NPEPL1
MYO5C
CCDC130
KIAA1549
GCLC
TSEN54
CASKIN2
TEX9
RFX7
ZC3H6
PDE8A
ATAD2B
C1orf53
ST6GALNAC6
NDUFAB1
GNAI2
PTPRE
SLC22A23
PCDH8
PDE9A
CIZ1
SYT7
DNM1
WDR11
MAP3K2
MAPKAPK5
CLCC1
ZNF746
NPAS4
IL36RN
IL36B
BCAS3
PIAS2
KATNAL2
LOC100287896
LIPT2
GTF2F2
NUCKS1
ZFPM1
SAMD4B
LUC7L2
FMC1-LUC7L2
FMC1
INTS4
MYO5B
SCAND1
ISM1
MTF2
DNAJC25-GNG10
DNAJC25
RP9
GSAP
MYBPC3
UBQLN4
LAMTOR2
TEX2
SCNM1
LYSMD1
AHCYL2
ADPRHL1
CBX1
BNIP1
SKIDA1
YPEL3
TATDN2
AADACL4
BSDC1
UBE2F
MBOAT4
TMEM89
IRAK2
EXTL2
ZNF562
ITGB3BP
EFCAB7
DBNDD2
PDE11A
GORASP2
SNCG
MMRN2
CTAG1B
CTAG1A
FAM184A
SARS2
MRPS12
ST20-MTHFS
RABGAP1
TMEM229B
FEM1C
ZNF572
COL18A1
APOA1
TBX6
APOBEC3B
PAXBP1
BCR
ZNF324B
ZNF761
BCAR3
LEP
DMAP1
TLR2
OR4K17
C2orf88
ANP32D
PRSS38
PUM1
ACYP2
RFC1
GPRC5C
FAAH
NDUFS7
MED23
SDR42E1
RBPJ
CEP85
SLC1A7
ACAA2
BAAT
COX16
ADCY10
RPS29
IL21R
SLC27A5
YWHAQ
ZNF117
SEM1
TMEM41A
ZNF623
INTS12
GSTCD
TMEM242
CALCB
RPL27
SATB1
SULT1C3
CEP72
PPIG
JMJD1C
RABGAP1L
RBM33
ZMPSTE24
PLEC
ZNFX1
IFT88
NDUFB3
FAM126B
TMEM70
ELOC
MRPL44
ZNF577
IL36A
GPD1L
NOS3
GDPGP1
CIB1
TTC32
POLE4
MROH7
C19orf18
CYP17A1
DCAF10
NARF
CALD1
HERPUD2
MAPRE2
ACOX3
SELENOH
ZNF426
TMEM14C
GTF2H2C_2
ZFP30
TMEM43
CHCHD4
SKP2
LMBRD2
GTF2H2
APOL4
CLK4
TRMT44
GTF2H2C
ENG
RPL37
TOP3B
GALNT1
PAFAH2
COMMD2
ADI1
ZSCAN31
ZNF561
CYBC1
TOR1AIP2
TOR1AIP1
TMEM62
RBBP9
NME4
KDM3A
ZNF792
LMLN2
TFPT
PRPF31
RERE
RPS14
ZNF408
ARHGAP1
GSTA4
CAT
TATDN3
NSL1
YTHDC2
CLDN16
PPIP5K2
LIPA
GIN1
ZNF134
PSEN1
PDCD7
PIK3R1
IPO4
RAD54L2
FRG1
DNAJB12
SLC25A51
TIGD2
REEP3
MAD1L1
TMEM68
TGS1
THAP11
NUTF2
VTA1
NMBR
SFT2D3
SUPT7L
SLC4A1AP
RPL11
GTF2H4
ANKRD54
PARP15
LSG1
EPS8
INTS5
AUH
YJU2
EIF3L
CENPT
RTTN
BAIAP2
ACTL8
FBXO31
ZNF32
AP3S2
YY1AP1
DAP3
STAT3
CATIP
CCDC200
GLO1
MSRA
CDK5RAP1
MMACHC
CCDC163
WDR36
TMEM44
KDM1A
GCNT3
ITGA4
TEFM
LCN8
SNIP1
DNALI1
THOC5
CAMK1D
FGD3
INO80C
RNF187
EIF1AD
BANF1
SNAP47
TACO1
ZNF841
ESR2
PRIM2
ORC4
MBD5
REN
ZNF829
ZNF568
PPP1R11
GINS1
ZBTB45
COPS7B
DEK
SUPT6H
SDF2
MRPL21
IGHMBP2
SCMH1
JMJD4
WDR74
PSMF1
SLC2A7
ILF2
SLC41A3
ATP5MC2
LARP1
SGCE
PEG10
SNX17
EIF2B4
TTC26
EFCAB10
TRUB2
COQ4
POLR3E
TMEM222
HSD17B6
NEMF
SAR1B
CCSER2
SLC29A2
DUS1L
FGFBP3
CCDC97
ZNF571
ZNF540
NBN
ZNF391
SPAAR
RMND1
ARMT1
C1orf167
AKAP10
MTIF2
GALK2
MOB4
DPP9
C17orf75
IST1
WDR43
METTL8
DCAF17
GTPBP3
ANO8
LGR5
MRPS18C
HELQ
CD47
SMIM31
MMP7
KLHL20
ATP9B
C1GALT1C1L
ZBTB40
ZNF226
TUT1
DUSP16
GABPB2
ARID1A
TMEM79
SMG5
COPS4
NFE2L3
CANT1
HSPE1-MOB4
HSPE1
HSPD1
SAMD4A
NCOA7
GASK1A
TEX46
TTI2
NSA2
GFM2
OTUD7A
CCNC
DDX18
WDR55
C16orf54
ANXA2
TMX2
MED19
CFAP298-TCP10L
CFAP298
ATF7IP
MRPL48
HYAL1
RUVBL1
NRBP2
ZNF566
FASTKD1
GTF3C5
SNRPB
NDUFAF1
HACL1
BTD
POLG
ZSCAN25
CPPED1
RAB30
MLEC
EXO5
CASP4
LZTR1
RTCA
STAU1
MNAT1
PIN4
NUP54
MITD1
C8orf37
TTC4
SERHL2
TPR
ODR4
AFAP1L1
NR1H3
ACP2
FBXL12
SLC45A4
ANK3
CLDN4
INPP5F
TMEM101
H4C8
RMDN2
CCNI
SERPINB1
NDUFS3
KBTBD4
CD14
PCP4L1
RPS20
ADPRS
ADNP
KLRD1
PDE6D
CCAR2
C8orf58
MTBP
MRPL13
GOLGA5
TLNRD1
PRPF18
GMPS
COX7A2
SUGCT
MPLKIP
TEKT2
NOP16
HIGD2A
C18orf21
TMBIM4
PSRC1
EPRS1
GRPEL2
SLTM
BRF2
GPAM
FAM228B
FABP6
BRWD1
CCDC150
MED18
SNRPD1
RNASET2
REM1
DEFB124
TIPARP
SLC35E2A
IAH1
TSFM
ING2
SDHAF3
NAA20
PARP2
SRSF7
ALKBH3
SLC35A3
LOC102724265
SF3B6
PIGW
MYO19
CRKL
HNRNPD
TRIM38
PHIP
MATK
CASC3
KRTAP10-8
ZNF772
CCNT1
COPS2
SLC38A9
HUS1
ADAR
RANBP1
UBLCP1
EIF3E
ZNF292
TPK1
MRPL34
TIMM22
SESN1
PSMD3
POLR1H
NECAP2
CLUAP1
SMU1
AMD1
TTLL1
LRIG2
CDC73
TRMT2A
VIRMA
MRPL3
RAB18
TGFBR2
LRP6
PRDX3
ALG10
PLEKHM3
N4BP2L2
RPL26L1
TEX50
CDYL
FAM98B
CADM2
ZNF280D
SEC23B
PRRC1
MTOR
LONRF2
SMG7
FBXO38
TTC13
CCR6
SCGB1C1
CALCRL
LNPEP
MTR
PUS10
PEX13
WWTR1
CENPV
TIGD1
EIF4E2
WBP1
MAGOH
INO80B
RNF125
SACM1L
DLAT
ZNF605
TMED1
R3HCC1
ZNF165
CCDC88A
RBM45
ZSCAN30
PIP4P2
AARS2
COA6
CEP57L1
NBPF1
CDK19
PDCD6IP
CRYAA2
CRYAA
ZNF554
FOXN1
CASP10
DHRS2
PIH1D2
NKAPD1
RPL5
TARS3
MRPS14
PPIAL4F
PPIAL4E
PPIAL4D
LPIN1
TRMT5
SLC38A6
TSGA10
C2orf15
CLTC
STOML2
TIAM1
RPS15
ZNF438
HAX1
KMT2D
ACSM2B
ZSCAN22
MYCBP2
SNRPD3
GUCD1
RNF6
DPP8
AAR2
SUGT1
FAM234A
DDX1
GABPA
ATP5PF
VPS13B
SPSB1
MSL2
CEP85L
SRP9
CASS4
PPP2R5B
PRMT5
POM121L2
SMIM13
KRR1
THAP6
TTC5
U2SURP
NMNAT1
LZIC
H4C12
MRPL16
C10orf88
ZNF383
MFF
ZNF512B
TMEM42
CEP120
ITFG2
YTHDF2
TRAM1
CDIPT
SLC35E2B
MAPK1IP1L
HLA-E
TBCK
AIMP1
PRPSAP1
STK19
DXO
CREM
MRPL39
ITGAL
RBM28
RPS3A
CBWD5
EPB41
SEL1L
DHX16
ZZZ3
RCAN1
PCBP2
MRPS33
HIP1
GSPT1
ERCC6L2