ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX150666 | U2OS
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX10976388: 293

◢ SRX10976389: 293

◢ SRX150671: 293

◢ SRX16676305: 293

◢ SRX16676306: 293

◢ SRX17826856: 293

◢ SRX17826857: 293

◢ SRX17826858: 293

◢ SRX17826859: 293

◢ SRX17826860: 293

◢ SRX17826861: 293

◢ SRX22117740: 293

◢ SRX22117741: 293

◢ SRX22117742: 293

◢ SRX22117743: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX1799522: CD4+ T cells

◢ SRX1799525: CD4+ T cells

◢ SRX1799528: CD4+ T cells

◢ SRX1799531: CD4+ T cells

◢ SRX671999: ES cells

◢ SRX672001: ES cells

◢ SRX672002: ES cells

◢ SRX9823127: GM12878

◢ SRX9823128: GM12878

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX11220464: HT-29

◢ SRX11220465: HT-29

◢ SRX11220466: HT-29

◢ SRX9977682: HUVEC

◢ SRX1925740: iPSC derived neural cells

◢ DRX402530: K-562

◢ DRX402531: K-562

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX5457586: K-562

◢ SRX5457587: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX12813813: MCF-7

◢ SRX12813814: MCF-7

◢ SRX1497516: MCF-7

◢ SRX7030916: MCF-7

◢ SRX7030917: MCF-7

◢ SRX7030918: MCF-7

◢ SRX7030919: MCF-7

◢ DRX402534: MYL

◢ DRX402535: MYL

◢ SRX065554: U2OS

◣ SRX150666: U2OS

◢ TRIM28: STRING

GTPBP6
MAPRE2
MTRNR2L8
ITGB3BP
EFCAB7
BSDC1
KCNJ15
GALNT1
SUPT7L
SLC4A1AP
AADACL4
ATF7IP
KDM3A
ZNF408
ARHGAP1
GABPB2
RCAN1
RPL27
C19orf18
COL4A5
COL4A6
MTRNR2L2
MSH3
DHFR
SF3A3
IRF6
LGALS3BP
COX16
TMEM79
SMG5
MMACHC
CCDC163
CDIPT
PPP6R1
KRBA1
COPS4
PRSS41
NDUFB3
FAM126B
PIH1D2
NKAPD1
RBBP5
EVPL
HDAC8
NME1-NME2
NME1
AURKAIP1
COX7A2
APOA1
PRPSAP1
INTS5
MTF2
RPS26
ARID1A
TUT1
LY6K
DNAJC16
CASP9
RABGAP1
ARTN
KDM5C
PLA2G2A
MED18
MAMDC2
EIF2S1
ATP6V1D
TBL1X
DUX4
RPS7
CLPTM1
CALCRL
SMG8
SLC33A1
ARHGAP39
TPM3
CCL20
STAT3
AHCYL1
PAXBP1
SELENOH
STC1
WBP1
INO80B
LIMK1
CCNI
RGPD2
RGPD1
SERPIND1
ITFG2
SLFN12
CDK12
HAX1
ZNF226
RFFL
TCTEX1D4
BTBD19
DHX16
AIFM1
BAIAP2
MAP3K14
DUSP6
ZNF571
ZNF540
WDR83OS
WDR83
GPC6
MAN2B1
KDM1A
TEX46
UBB
TNFRSF1B
RMND1
ARMT1
SSBP1
EIF3F
ZDHHC6
VTI1A
IGFL4
THG1L
GTPBP3
ANO8
ARMCX5-GPRASP2
ARMCX5
ELFN2
CELF1
PSMB7
ABRACL
RAG2
IFTAP
RBM33
GTF2H4
ZMPSTE24
UTP3
ISY1-RAB43
ISY1
STK40
CCDC174
CANT1
TIMP4
MTBP
MRPL13
LPIN1
PPIL3
NIF3L1
ARHGEF2
ILF2
BCL10
LRIG2
SNX27
RCAN2
COL18A1
RPH3AL
AKIRIN1
NOL12
ALG14
ZNF331
AP1G1
SLCO1A2
NID1
RNF125
REXO4
ADAMTS13
PACSIN2
C1orf174
UQCRC2
KAZN
MICALL1
GBA
COL23A1
YWHAQ
PLEKHG1
PPIP5K2
GIN1
TTC26
ZNF383
ZNF585B
PPRC1
TRIM5
TRIM22
RAD51AP1
C12orf4
ZW10
DUSP14
RPA2
IL17F
ZNF56
TTC39C
EIF5A
DNAJC25-GNG10
DNAJC25
ZNF790
TRUB2
COQ4
MRPS23
EFHD1
TFB1M
VTA1
NMBR
TMEM101
DNAJB12
DDX41
DLX4
PIKFYVE
ASAP3
FAM124B
TMEM247
ZBTB25
ZBTB1
FAAP20
CSNK1E
RHOD
ZNF165
CELA2A
NEMF
TRMO
YPEL3
TBX6
TMEM242
SLC25A53
THEM4
RPL38
RHOQ
ATP6V1E2
FRRS1
PRRT1B
MITD1
ARID3B
UFC1
TFPT
PRPF31
HAPLN2
LSG1
NCOA7
RNF207
ARMC1
RPL11
TBC1D19
SIN3B
BNIP1
TIMM10
SCARB1
MED11
B4GALT3
PDE12
TNPO3
UBE3B
IFI6
GTF3C3
MAST2
FAM89A
RABGAP1L
LRP6
HEATR1
PES1
STX1A
TM2D1
PARP15
PSMD3
KANSL3
FER1L5
C3AR1
TOMM40
CASP10
RPS18
VPS52
NEK2
B3GALT4
ECPAS
ZNF577
CD14
ZRANB2
ZNF688
CTSK
ADRA1A
SHOC2
BBIP1
BAHCC1
TEFM
BORCS6
SLC35B1
POLR3A
RPS24
HEMK1
C3orf18
RERE
RUVBL1
PCNP
TNFRSF1A
RAB30
RBM25
PLK3
PEX3
ADAT2
SCMH1
SNX17
EIF2B4
ATP5MC2
ZNF461
PTDSS2
ANO9
ADAT1
KRT19
SULT1C2
UFD1
CDC45
DPP9
TTI2
TIMM22
ZNF750
VPS35L
TRAFD1
S100A11
EIF3E
AASDH
AAAS
NOL8
CENPP
COIL
SLC39A9
ERH
GPATCH3
PAFAH2
SPHK2
RPL18
FAM83E
PRDM1
SNRPB
NR1H3
ACP2
CEP120
SMIM12
ZNF335
ZNF510
CLASP2
TAF12
NEURL4
IPO4
ZBTB45
EPRS1
TTC14
HEBP2
LIG3
ARMC7
TBC1D9
FAM184A
MTR
ZNF585A
DDX42
CCDC47
PHF5A
ACO2
CCNC
SNRPD1
CHMP7
TMCO3
DCUN1D2
INKA2
DDX20
PHC2
RCC2
TTLL2
SESN1
CEP57L1
GADD45A
ZXDC
DDX18
ANKRD13C
YJU2
FBXW7
ZNF221
AKR1A1
AMHR2
CCDC97
PIGL
NCOR1
TRAPPC8
MDM4
ISLR
CDK5RAP1
CNN2
TMEM259
GTF2B
PREPL
CAMKMT
PXT1
KCTD20
CMSS1
DMAP1
CCDC115
TIMM9
KIAA0586
OCIAD2
TRPV2
FAM222B
MROH7
GYPC
ALG10B
DHX8
PDSS2
FRA10AC1
DYNLRB2
POMGNT1
LURAP1
EFCAB14
JMJD1C
COMMD2
MAN1C1
CREM
ZNF484
SLITRK5
MTHFD1L
DAPK3
CLDN7
MRPS15
IPO13
DBF4B
ZNF793
NR1I2
GCNT7
FAM209A
MED23
CALD1
WSCD1
CNGA1
PPIH
USO1
FAF1
PDE10A
CLN3
APOBR
LRRFIP1
TTC32
POLR1H
ZNF260
ZBTB40
POLG
RBL1
GMEB2
ZNF2
ZSCAN4
SEC16B
NUF2
NBPF1
FDXACB1
C11orf1
SRSF1
TUFT1
KIAA0319
MTMR11
ATG4C
DNAJB4
KAT7
FUBP1
SLC1A3
CCDC59
KDM8
ANKRD17
BNIP5
MYO1B
MOB4
CPD
KDM6B
UQCRH
LRRC41
GLIPR1L2
SH2D5
SGMS2
TMEM128
GALM
BANP
MNAT1
DHRS2
KIF2C
SMARCD1
LYPLA2
ERICH4
DMAC2
CCNY
SF3B5
TM9SF4
RPL26
NFYC
CCDC107
ZNF806
INTS4
C19orf48
LIMA1
MRPL1
KRR1
MED16
PLCD3
ACBD4
EIF3D
CZIB
PSMB6
NYX
RTTN
INTS2
ZBED9
DNM2
LACTBL1
PCBP2
C11orf49
NR1H2
CSTF2T
SH2B1
ZNF302
SCP2
IRF9
AMD1
CDK19
RFXANK
BORCS8
SF3A1
CCDC157
HIRIP3
STBD1
RPL37A
SCT
CDHR5
OAZ3
MRPS33
PRRG2
NOSIP
GOSR1
MRPL9
PSMD9
HPD
CORO1C
F2RL1
CCDC130
TTLL12
CALCB
SNIP1
DNALI1
UIMC1
OSBPL8
PDE7B
ZNHIT3
SUGCT
MPLKIP
RIMBP3C
RIMBP3B
ARL14EP
MVB12A
ZBTB8OS
RBBP4
TIMM50
NRDE2
SREK1IP1
CWC27
MIDEAS
PHB2
CDC5L
TNFAIP1
IFT20
PEAK1
HMG20A
USP54
INSYN2B
SUGP1
MAU2
CDH1
CYB561D1
EMILIN1
POC1B-GALNT4
GALNT4
NME7
BLZF1
JUN
CHST4
RTL9
ASB5
NSA2
GFM2
RSPH3
CDK14
PRDM4
ZNF791
ZNF490
ZNF613
NCF4
ZBTB7B
WDPCP
MDH1
ZMYM6
USF1
TANC1
WDR55
CORO2A
PRKCI
WDR11
NOP16
HIGD2A
CRADD
MRPS18C
HELQ
BRF2
AAR2
SCYL3
UBQLN1
COASY
MLX
CYB5R2
SOD2
WTAP
AJUBA
INO80C
TMED1
TYSND1
SPRR2F
S100A13
KCNH4
HCRT
S100A1
SUMO3
WDR36
UTP11
ZNF48
WASF2
MYLPF
SEPTIN1
ZSCAN30
DCT
SLC39A6
NRL
DCAF11
SLC35A4
APBB3
HAUS4
CD2BP2
RUFY3
MYO1H
CES3
SLC25A44
TEF
ZNF518A
TMEM30A
ZNF570
ZNF569
BORCS7
FBXO46
AGTPBP1
CEP162
GDF6
ZNF572
IARS2
BPNT1
STARD10
CAND1
QRICH1
SIRT4
LMNA
PTAFR
TCIM
C8orf37
LSM5
AVL9
ATP5MC3
CYB5R4
UBQLN4
LAMTOR2
GPX1
LMNTD1
SCNM1
LYSMD1
RAB42
CNPY2
CPN2
RCC1
SLC7A11
MBNL2
SEPHS2
TBX18
NHLH1
LTA4H
NEK4
TRMT1
NACC1
MAP2K3
ASXL3
ADPRS
TEKT2
CCNT1
TMBIM1
ZNF350
STAT6
SNX12
KLF3
ACTR6
ABCD2
GLCE
TTC9B
MTRNR2L10
MRPL48
GABPA
ATP5PF
TBC1D22A
TPGS1
PSMD8
XPNPEP3
ST13
GABARAPL1
SRRM1
CASQ1
ARHGEF10L
UBE2F
TSFM
RIF1
TRIM25
CGGBP1
CALM2
C3orf38
MRPL54
APBA3
RC3H2
KIF20A
BRD8
SIRT3
PSMD13
PLAAT2
RAB33A
BEST4
CFAP298-TCP10L
CFAP298
NUP54
SLC35E2A
ZKSCAN2
GOSR2
HBS1L
GPN3
FAM216A
TRMT11
WDR5B
GNA12
DOCK3
CD24
TPK1
RIN2
PSG9
FNTB
ETFBKMT
HACD2
PLEKHG2
AP2M1
ZFP36
CRYAA2
CRYAA
MRPL45
PRKCSH
CCDC151
ATAD5
PMF1-BGLAP
PMF1
FGD4
NHS
RAI14
NECAP2
TAF15
C16orf92
NECAP1
ZNF300
PLPP5
ENDOV
PSME3
CSF3R
ZNF566
FAM13A
USHBP1
RPL22
ZNF573
MSANTD3
CHRNA9
DSTYK
ZSCAN22
DDX46
INPP5A
HAUS6
NTN1
RPS29
TAOK3
FOXO3B
ZFC3H1
THAP2
GCNT2
SLFN5
POLR2J3
SLC30A6
ADGRL1
SLC35F2
CTSB
HROB
IGF2R
RPAIN
NUP88
COPS7A
MTUS1
TTC39A
MZT1
BORA
HTR3A
PDXP
GORASP2
HEXIM1
EIF4A2
TXNRD1
PLIN3
KXD1
AP3S2
LZTR1
DNAJC11
MIS18BP1
THOC2
TAF13
UBR2
GP5
TIAM2
TMEM120B
FCRLA
C4orf51
GSTA4
EIF1AD
BANF1
SRFBP1
GNAL
NOLC1
ARHGAP24
AKR1D1
TRIM10
HAAO
CUL2
C2CD5
TMEM208
LRRC29
TXN2
TBCB
SNU13
POLR2I
OVOL3
DYNC1I2
SLC4A8
CACTIN
AARSD1
GALNT6
RUFY4
C6orf118
SULT2A1
TUSC3
TATDN3
NSL1
ZNF391
RNASET2
RWDD1
ARID2
PLS1
CASP3
TXNDC17
KIAA0753
NXT2
CHKA
DRG2
GTF3C5
TTC5
SFSWAP
MAD2L1BP
GTPBP2
SRP54
CREBL2
SLC35E4
SLC35A1
TTC31
CCDC142
CUL3
POGLUT3
FUCA1
C1orf100
RASL10B
CDRT1
ADAMTS16
ZFP30
SMG7
IRF2BP2
SLC18B1
SH3BP5
CLK4
MEGF8
NOL11
CCNG2
UTP25
SIAH1
THOC5
PUS10
PEX13
YARS2
ABR
ACBD5
CLCN3
DNAL1
RTCB
YLPM1
DYNC2I2
RBM8A
ELSPBP1
BSPH1
NIP7
COG8
SRSF4
PHF12
TIPRL
NOCT
KCNE2
PIP4P1
TBC1D1
KLHL34
SSR2
AQP12B
LUC7L2
FMC1-LUC7L2
FMC1
TES
RPS12
RPS27A
CLHC1
PNISR
RRBP1
TRMT112
PRDX5
INHA
OBSL1
MAPK13
NPAS4
CCDC90B
CMPK1
MPDU1
LOC100996842
CD68
MAP3K7
POC5
CD320
NTPCR
LTBR
SULT1C4
SNRPG
PYGB
SCNN1A
SPAAR
CEP85L
U2SURP
SPIDR
DEDD
ARHGAP9
DCAF8
BCL2L13
MARS1
ATP2C1
DGKD
CACYBP
SLC35D1
TSPAN3
GPRC5A
HMGB1
USPL1
GALK2
COPS2
RPS3A
TAS1R1
NOL9
CHPF2
THRAP3
AMPD3
ABCF2
CHID1
LRP10
IAPP
PRSS23
FAM228B
SF3B6
MTOR
UBOX5
FASTKD5
ZNF180
ZNF416
ELAC2
AFTPH
MXI1
ERAL1
ZIK1
NSUN3
DHFR2
GTSE1
ORAI3
FIG4
AK9
PIK3CB
ARSF
DHRS13
ZNF286A
OSGEPL1
PRCC
CLASP1