ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1945293 | hESC WIBR3
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX10976388: 293

◢ SRX10976389: 293

◢ SRX150671: 293

◢ SRX17826856: 293

◢ SRX17826857: 293

◢ SRX17826858: 293

◢ SRX17826859: 293

◢ SRX17826860: 293

◢ SRX17826861: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX1799522: CD4+ T cells

◢ SRX1799525: CD4+ T cells

◢ SRX1799528: CD4+ T cells

◢ SRX1799531: CD4+ T cells

◢ SRX671999: ES cells

◢ SRX672001: ES cells

◢ SRX672002: ES cells

◢ SRX9823127: GM12878

◢ SRX9823128: GM12878

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◣ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX11220464: HT-29

◢ SRX11220465: HT-29

◢ SRX11220466: HT-29

◢ SRX1925740: iPSC derived neural cells

◢ DRX402530: K-562

◢ DRX402531: K-562

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX5457586: K-562

◢ SRX5457587: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX12813813: MCF-7

◢ SRX12813814: MCF-7

◢ SRX1497516: MCF-7

◢ SRX7030916: MCF-7

◢ SRX7030917: MCF-7

◢ SRX7030918: MCF-7

◢ SRX7030919: MCF-7

◢ DRX402534: MYL

◢ DRX402535: MYL

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

FAM153B
FRG2C
KCNJ15
SNCG
MMRN2
DUX4
THEM4
CNOT3
TATDN2
AADACL4
ST20-MTHFS
IRAK2
FRG2
LMLN2
FAAH
SULT1C3
TMEM89
YPEL3
BCAR3
TMEM14C
LEP
GCNT7
FAM209A
SARS2
MRPS12
CFHR4
PDE11A
OR4K17
RBPJ
CALD1
ACSM2B
ACAA2
COL23A1
CALCB
AKAP10
ACYP2
ZNF562
BAAT
TMEM229B
FAM184A
SUPT6H
SDF2
GSTM5
LSS
GPR82
ZNFX1
MON2
FEM1C
SLC27A5
ANP32D
CASP4
FAM227B
DTWD1
TXNRD2
CYP17A1
CD200R1L
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
UGT1A3
CERS5
EXTL2
CADM2
CEP85
EFCAB10
APOL4
UBE2F
SMCO1
IFT88
ESR2
ATP9B
C2orf88
SCCPDH
DPH2
CASP10
SMIM31
NARF
CYBC1
PUS1
GAS2L3
ACSM2A
TLR2
SATB1
TNFRSF6B
FABP6
ADI1
NOS3
DGKQ
MBOAT4
ZNF117
ZNF841
GCNT1
RTCA
GTF2A1L
ZNF792
TMX2
MED19
CYP4X1
SPRR2F
RFC1
NUDT9
C1GALT1C1L
EHD2
PNPLA7
TMEM62
GTF3C5
BCR
CATIP
ZNF557
COLEC11
FASTKD1
DUSP16
TEX50
GPD1L
ZNF561
ZNF280D
POLR2J2
ACOX3
TRMT44
PTGES2
OR2AP1
ITGB3BP
EFCAB7
PRSS38
SERHL2
IGFALS
ZNF583
USP17L20
USP17L22
FBXO31
BCKDK
SEM1
PLEKHA5
C3orf14
GLO1
TCF4
ZNF324B
NXPE2
PDCD7
ORC4
MBD5
SDR42E1
ZNF134
HEATR4
ANXA3
THAP11
NUTF2
CENPT
CPA1
EIF1
GORASP2
SEL1L
PHB
SRD5A3
SYN3
NSUN7
COX8C
HSD17B4
MPHOSPH8
NANOGP8
ZNF761
ADCY10
TAAR9
TMEM202
MRPS36
PIGZ
KRT82
PIK3R1
TFPI
SET
PDGFRL
RPL11
REXO4
ADAMTS13
OR8B3
DUSP6
CTAG1B
CTAG1A
NFE2L3
SLC35G3
KIF2C
INPP5F
OTUD7A
N4BP2L2
CCDC83
KRTAP10-8
OPRL1
LKAAEAR1
THOC5
EML2
SLC38A9
SCGB1C1
TULP4
RTP3
EIF4E
FGFBP3
OR1E3
OR6A2
SLC2A7
PIN4
PTCH1
ELAVL3
KLRD1
LCN8
RAB29
ZNF577
KRBA1
MTRNR2L1
BSDC1
MTRNR2L2
MSH3
DHFR
MTRNR2L8
GTPBP6
DEGS2
GBA
DBNDD2
RABGAP1
CBX1
ZNF572
COL18A1
APOA1
TBX6
NUF2
APOBEC3B
PAXBP1
MTF2
RBBP5
RPS7
ARHGAP39
SSBP1
DMAP1
AURKAIP1
SUMO3
SAMD4B
LUC7L2
FMC1-LUC7L2
FMC1
PRRT1B
SF3A3
PUM1
STX16
GPRC5C
NDUFS7
MED23
ST6GALNAC6
SLC1A7
NME1-NME2
NME1
COX16
DCP1A
CCDC130
IL21R
RPS29
PEX3
ADAT2
BANP
YWHAQ
TTLL12
TMEM41A
ZNF623
INTS12
GSTCD
RAB37
TMEM242
EIF2D
RPL27
CEP72
PPIG
JMJD1C
RABGAP1L
RBM33
ZMPSTE24
PLEC
NDUFB3
FAM126B
TMEM70
ELOC
FRA10AC1
MRPL44
IL36A
KMT2A
GDPGP1
CIB1
TTC32
POLE4
MROH7
C19orf18
DCAF10
HMGB1
DSTYK
NPAS4
TBC1D19
HERPUD2
MAPRE2
SELENOH
ZNF426
USPL1
GTF2H2C_2
ZFP30
TMEM43
CHCHD4
SKP2
LMBRD2
TRIP4
GTF2H2
SLC24A1
INTS14
POLR2J3
ZNF317
CLK4
STX18
GTF2H2C
ENG
RPL37
TOP3B
DPY19L4
DRG2
GALNT1
DNAJC25-GNG10
DNAJC25
PRELID3B
ATP1A1
PAFAH2
COMMD2
SLC33A1
ZSCAN31
POLR3B
TOR1AIP2
TOR1AIP1
RBBP9
NME4
KDM3A
TFPT
PRPF31
RERE
RPS14
ZNF408
ARHGAP1
CAT
MRPS31
TATDN3
NSL1
SMARCD2
YTHDC2
UTP3
CLDN16
PPIP5K2
LIPA
GIN1
CCDC59
PSEN1
ALG10B
NSFL1C
IPO4
RAD54L2
SLC44A1
FRG1
DNAJB12
SLC25A51
TIGD2
GTF3C3
REEP3
TDP2
ACOT13
EIF3F
MAD1L1
TMEM68
TGS1
VTA1
NMBR
SFT2D3
SUPT7L
SLC4A1AP
GSTA4
GTF2H4
ANKRD54
PARP15
LSG1
EPS8
INTS5
AUH
YJU2
EIF3L
MRPL40
HIRA
RTTN
BAIAP2
ACTL8
ZNF32
AP3S2
YY1AP1
DAP3
SMG8
STAT3
ZNF341
MSRA
BMS1
CDK5RAP1
MMACHC
CCDC163
WDR36
TMEM44
PPP6R1
HTR5A
KDM1A
GCNT3
ITGA4
TEFM
SNIP1
DNALI1
CAMK1D
FGD3
INO80C
RNF187
DRAP1
C11orf68
EIF1AD
BANF1
SNAP47
TACO1
PRIM2
REN
ZNF829
ZNF568
PPP1R11
GINS1
ZBTB45
SCAND1
COPS7B
DEK
CCDC200
MRPL21
IGHMBP2
SCARF1
SCMH1
JMJD4
WDR74
PSMF1
KANSL3
FER1L5
ILF2
SLC41A3
ATP5MC2
USP30
LARP1
SGCE
PEG10
SNX17
EIF2B4
FAM207A
TTC26
TRUB2
COQ4
POLR3E
TMEM222
RILP
HSD17B6
NEMF
WDR11
SAR1B
CCSER2
SLC29A2
DUS1L
FAM133B
CCDC97
ATR
ZNF571
ZNF540
NBN
ZNF391
SPAAR
RMND1
ARMT1
TSEN15
C1orf167
MTIF2
GALK2
MOB4
MRPL1
BNIP1
DPP9
C17orf75
IST1
WDR43
METTL8
DCAF17
GTPBP3
ANO8
LGR5
MRPS18C
HELQ
CD47
MMP7
KLHL20
ZBTB40
ZNF226
TUT1
GABPB2
ARID1A
TMEM79
SMG5
COPS4
SCNM1
LYSMD1
NOTCH2NLC
CANT1
HSPE1-MOB4
HSPE1
HSPD1
MRPS23
SAMD4A
NCOA7
GASK1A
TEX46
TTI2
NSA2
GFM2
CCNC
DDX18
WDR55
C16orf54
ANXA2
OAZ3
CFAP298-TCP10L
CFAP298
ATF7IP
MRPL48
CTNNB1
HYAL1
RUVBL1
KIAA1549
NRBP2
ZNF566
SNRPB
NDUFAF1
HACL1
BTD
POLG
ZSCAN25
CPPED1
RAB30
MLEC
EXO5
LZTR1
SEC13
STAU1
CLTB
MNAT1
NUP54
MAN2C1
MITD1
C8orf37
TTC4
TPR
ODR4
AFAP1L1
ZNF609
NR1H3
ACP2
FBXL12
SLC45A4
ZCCHC4
ANK3
CLDN4
TMEM101
H4C8
RMDN2
CCNI
SERPINB1
OPA1
NDUFS3
KBTBD4
CD14
PCP4L1
RPS20
ADPRS
ADNP
PDE6D
CCAR2
C8orf58
MTBP
MRPL13
CHD1L
GOLGA5
B4GALT7
TLNRD1
PRPF18
GMPS
COX7A2
SUGCT
MPLKIP
TEKT2
NOP16
HIGD2A
C18orf21
TMBIM4
PSRC1
EPRS1
GRPEL2
TPM1
SLTM
BRF2
GPAM
FAM228B
BRWD1
CCDC150
MED18
SNRPD1
RNASET2
REM1
DEFB124
TIPARP
SLC35E2A
DCLRE1B
AP4B1
IAH1
TSFM
DGKZ
ING2
SDHAF3
NAA20
PARP2
METTL9
SRSF7
ALKBH3
SLC35A3
LOC102724265
SF3B6
PIGW
MYO19
SLC39A13
CRKL
HNRNPD
TRIM38
ADRM1
PHIP
MATK
ZNF398
CASC3
ZNF772
CCNT1
COPS2
HUS1
ADAR
RANBP1
UBLCP1
EIF3E
ZNF292
TPK1
MRPL34
TIMM22
SESN1
PSMD3
POLR1H
NCBP3
NECAP2
CLUAP1
SMU1
AMD1
TTLL1
LRIG2
CDC73
TRMT2A
VIRMA
MRPL3
SNRPB2
RAB18
TGFBR2
LRP6
PRDX3
ALG10
PLEKHM3
RPL26L1
LRRC37A3
CDYL
FAM98B
SEC23B
AGK
PRRC1
GFI1B
MTOR
LONRF2
SMG7
FBXO38
TTC13
CCR6
SEC22B
CALCRL
LNPEP
MTR
PUS10
PEX13
WWTR1
CENPV
TIGD1
EIF4E2
WBP1
MAGOH
INO80B
KAT6A
RNF125
SACM1L
DLAT
ZNF605
NFAT5
TMED1
R3HCC1
ZNF165
CCDC88A
RBM45
ZSCAN30
PIP4P2
AARS2
SNRPE
COA6
CEP57L1
NBPF1
CDK19
PDCD6IP
LSM5
CRYAA
CRYAA2
ZNF554
FOXN1
DHRS2
PIH1D2
NKAPD1
ANKRD40
RPL5
TARS3
PPP5D1
CALM3
MRPS14
PPIAL4F
PPIAL4E
PPIAL4D
LPIN1
TRMT5
SLC38A6
TSGA10
C2orf15
CLTC
STOML2
TIAM1
RPS15
ZNF438
HAX1
KMT2D
AVL9
ZSCAN22
SRRM3
MYCBP2
SNRPD3
GUCD1
RNF6
PSMD6
DPP8
AAR2
SUGT1
FAM234A
DDX1
GABPA
ATP5PF
VPS13B
SPSB1
MSL2
TEX9
RFX7
PRKAG2
CEP85L
SRP9
CASS4
PPP2R5B
PRMT5
POM121L2
ZNF76
SMIM13
KRR1
THAP6
TTC5
U2SURP
NMNAT1
LZIC
H4C12
MRPL16
C10orf88
WWOX
CLUL1
ZNF383
MFF
TMEM42
CEP120
ITFG2
YTHDF2
PRKAB2
TRAM1
CDIPT
SLC35E2B
MAPK1IP1L
HLA-E
TBCK
AIMP1
PRPSAP1
STK19
DXO
CREM
MRPL39
NOXA1
ITGAL
RBM28
RPS3A
CBWD5
EPB41
DHX16
ZZZ3
RCAN1
ZNF512B
PCBP2
NOTCH2NLA
MRPS33
HIP1
GSPT1
ERCC6L2
WDFY1
SGMS2
TBL1X
PTPN4
SLC35B1
CNN2
NUP107
GLIPR1L2
LRRC59
ATG101
ZNF385A
RRN3
ZNF439
TMEM259
ZNF546
SLC35G5
MRPL19
PPP1R3B
SDCCAG8
CEP170
FBXO22
TRDMT1
PDRG1
EEA1
LTA4H
ARRDC2
ZNF425
SEC14L1
H4C11
NSUN4
NDFIP1
RPS19
ASF1A
PFKM
MAP1LC3B2
DHTKD1
MEMO1
SOD2
RALBP1
GNB2
ZNF518A
HNRNPA1L2
DNAJC11
SAE1
RABGGTA
STX6
KNL1
CDK12
CYB561D1
XKR7
RESF1
HEXIM1
METAP1
CELF2
PES1
ARMH3
MED4
ZNF846
PHF21A
IFI44
CNOT11
RTN4
TSC1
PAK1IP1
INTS2
C6orf52
CYB5A
ACBD6
MMEL1
STC1
SEC14L5
ATG4C
CCDC115
ZNF770
TMEM65
MTMR6
FAM13A
C11orf49
SLC39A3
LMBR1L
UGCG
RRP15
DCT
TLR1
ATG5
ABCC10
FLT3LG
TM9SF4
EIF2B3
TVP23B
CUL2
ZER1
RIF1
NT5DC1
DISP1
SMIM12
POLR2E
LRRC61
HEATR1
QRICH1
PRAME
ZNF3
YBEY
RUNX2
MCM3AP
C2CD5
MRPS15
RPS26
WDR70
POLR3GL
ANKRD34A
FAIM
ATP5MC3
RPL38
INTS4
P3H4
FKBP10
RAB5C
CIZ1
ATXN7L2
CRBN
IQSEC3
FOXJ3
CBR1
ALG14
GARS1
INKA2
DDX20
TMBIM1
CNGA1
SETD1A
ZNF527
PRRG2
NOSIP
COG2
ZNF296
GEMIN7
ABLIM1
VWA8
IL36RN
IL36B
CACNG1
NNT
TMBIM6
MAMDC2
CCDC174
TTC23L
PTPRCAP
SHF
ATAD2
ACTR3C
CD248
ZMYM5
TPM3
UBE2L3
ASNS
ABCG1
TMA16
PRSS22
RAP2C
CBWD3
ARID3B
MEX3C
TXLNB
EPN1
PPIL3
NIF3L1
TTC38
PKDREJ
FAM160B1
DHRS4