ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX17826859 | 293
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX10976388: 293

◢ SRX10976389: 293

◢ SRX150671: 293

◢ SRX16676305: 293

◢ SRX16676306: 293

◢ SRX17826856: 293

◢ SRX17826857: 293

◢ SRX17826858: 293

◣ SRX17826859: 293

◢ SRX17826860: 293

◢ SRX17826861: 293

◢ SRX22117740: 293

◢ SRX22117741: 293

◢ SRX22117742: 293

◢ SRX22117743: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX1799522: CD4+ T cells

◢ SRX1799525: CD4+ T cells

◢ SRX1799528: CD4+ T cells

◢ SRX1799531: CD4+ T cells

◢ SRX671999: ES cells

◢ SRX672001: ES cells

◢ SRX672002: ES cells

◢ SRX9823127: GM12878

◢ SRX9823128: GM12878

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX11220464: HT-29

◢ SRX11220465: HT-29

◢ SRX11220466: HT-29

◢ SRX9977682: HUVEC

◢ SRX1925740: iPSC derived neural cells

◢ DRX402530: K-562

◢ DRX402531: K-562

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX5457586: K-562

◢ SRX5457587: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX12813813: MCF-7

◢ SRX12813814: MCF-7

◢ SRX1497516: MCF-7

◢ SRX7030916: MCF-7

◢ SRX7030917: MCF-7

◢ SRX7030918: MCF-7

◢ SRX7030919: MCF-7

◢ DRX402534: MYL

◢ DRX402535: MYL

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

MTRNR2L2
MSH3
DHFR
MTRNR2L8
COL23A1
MED23
FRG2C
GTPBP6
ITGB3BP
EFCAB7
FRG2
DSTYK
MTRNR2L1
MTF2
NUF2
POLR2J3
TXNIP
WDR11
FRA10AC1
TOR1AIP2
TOR1AIP1
C18orf21
SEC13
NDUFS7
DCP1A
GOLGA3
SF3A3
EIF2D
STX6
TMEM222
SSBP1
DCAF10
YARS1
S100PBP
INTS12
GSTCD
METTL9
CCNI
BSDC1
KMT2A
STAT3
PRPSAP1
REXO4
ADAMTS13
GBA
TOMM22
ZSCAN30
MRPL39
RNF187
NUP54
LRRC59
SLC24A1
INTS14
NDUFS3
KBTBD4
DNAJB12
MRPL44
AURKAIP1
TCF3
CASC3
GTF2H2
GTF2H2C
NME1-NME2
NME1
GTF2H2C_2
TATDN3
NSL1
SMARCD2
TTC4
SLC25A53
STX16
RPS7
BRWD1
PIK3R3
TSNAX
SNAP47
JMJD4
NOC3L
TARS3
DHX40
SPATC1L
MRPS31
RAD54L2
IPO4
TMEM242
AGK
CCT2
SUPT7L
SLC4A1AP
USP30
DRAP1
C11orf68
EXD2
HMGB1
USPL1
PIH1D2
NKAPD1
INO80C
TRMO
NOTCH2NLC
ZNF76
LRP6
SLC44A1
STX18
TVP23B
DRG2
EIF1AD
BANF1
TTC26
PEX3
ADAT2
IPO13
HEMK1
C3orf18
MCOLN1
PAXBP1
MRPL48
FRAT1
UBC
BANP
GOSR2
DR1
MRPL27
EME1
BMS1
CRYAA2
CRYAA
ZMPSTE24
TOP3B
FLCN
DTWD2
CDON
RPL37
NSFL1C
FBXO22
SELENOH
DMAP1
TUT1
AJUBA
MRPS23
TMEM101
DPY19L4
TSEN15
RPL5
TACO1
WASHC2A
DEGS2
RBBP5
THEM4
PLEKHM3
TRDMT1
DYNC2I1
HDAC2
SLC39A13
AP3S2
FOXJ3
RWDD1
PARK7
PDAP1
BUD31
ZNF408
ARHGAP1
GTF3C3
SLC39A6
TMEM39B
PSMF1
KAT6A
DUX4
UTP3
PHIP
RPL27
RPL38
ATXN7L2
NUP205
KANSL3
FER1L5
PCDH9
NPAS4
SLC35A3
SNX17
EIF2B4
ALKBH3
POLR3B
C21orf91
ZNF165
SAR1B
CCNC
FAM187A
EFTUD2
CCDC103
GTF2H4
SOD2
WTAP
TPR
ODR4
NOL12
CLN5
PRPF18
SDHAF3
TBPL1
ZNF397
ZBTB45
UROS
BCCIP
GFI1B
TSC1
FAM207A
TIGD1
EIF4E2
TBC1D19
TAOK3
KCTD9
CDCA2
SUDS3
ZSCAN22
C12orf73
TEFM
IBA57
LUC7L
VPS25
COX16
HSPE1-MOB4
HSPE1
HSPD1
PET117
KAT14
YTHDF2
KRBA1
TTLL12
ABCA3
ALKBH5
MFF
WDR70
PTDSS1
MTERF3
SMG7
PSTK
WASHC2C
GPR180
ATG101
CCNG2
ZNF24
TTC28
NR1H3
ACP2
C10orf88
ZNF296
GEMIN7
PNPLA6
SUMF1
CCDC97
MITD1
PSD
FBXL15
NR1H2
CZIB
WBP1
INO80B
MTIF2
MRPS15
PDCD6IP
ARRDC4
MAPK1IP1L
EIF3D
SPNS1
CCDC59
MRPL21
IGHMBP2
MAN2C1
CYP51A1
FEM1B
POLE4
AMD1
CDK19
VPS13B
LMAN2
HDAC8
DDX1
KCTD5
N6AMT1
SPDYE14
SPDYE10P
ZNF576
IRGQ
NUB1
SNRPE
DISP3
SLC33A1
SCAND1
ATR
SNRPD1
LRRC37A3
UBE3B
SEC22B
COG2
TM2D1
L3HYPDH
JKAMP
MRPS7
GGA3
INTS5
HUS1
CHD1L
PRKAB2
MKRN2OS
MKRN2
THOC3
ZNF48
MYLPF
SEPTIN1
TBC1D13
FRG1
MRPS33
SETD1A
CALM2
PRMT2
ACBD3
TXN2
TM2D3
ATF7-NPFF
ATF7
ECSIT
RPS20
DPP8
PRSS38
NBN
RUVBL1
EEFSEC
STOML2
RRP15
HLCS
FMNL3
RAB11A
COMMD6
CLK3
ZNF862
BRPF1
NCBP3
SIKE1
MTERF1
GORASP2
KLHL20
TCTE3
ERMARD
DISC1
ZNF212
BBS1
COA6
RFXANK
BORCS8
CSNK1D
MRPL40
HIRA
CDK5RAP1
ALG10B
NOP16
HIGD2A
TSC2
NTHL1
ZER1
AKAP10
SLC39A3
ARHGEF1
FZD1
DOCK7
ZNF444
TRIP4
SUGCT
MPLKIP
SNRPD3
GUCD1
VAMP4
TNPO3
THG1L
MIER1
SIRT6
ANKRD24
DNAI4
GHITM
ARL8B
PTPN21
CCDC88A
ARMH3
DCP1B
TOM1
VTA1
NMBR
PDXDC1
GTF2IRD2B
ZNF219
TMEM253
AAR2
HEXA
ENSA
WDR36
GPAM
TRAF6
RAG1
CLPB
TRIAP1
VPS37B
PAFAH2
RSPH3
DDX59
PBX3
MSANTD2
CBX1
SNRPB2
RPEL1
MTPN
LUZP6
UCHL3
DCXR
C17orf75
GTF3C5
RNF125
NLE1
STARD10
BRF2
SAYSD1
SS18
IMPACT
NCDN
KIAA0319L
NDUFB3
FAM126B
HNRNPA1L2
BIRC5
MIS12
DERL2
UNC13B
TMEM41A
AARS2
MED4
ESCO1
NUDCD3
CTNNB1
DNAJC11
CIAO3
TXLNA
APOA1
POLG
CLTC
U2SURP
SMG8
GFM1
TRNAU1AP
VDAC2
ZNF609
OTUD7B
PTS
TIGD6
HMGXB3
CENPN
MBTPS2
SRCAP
LOC730183
ITGB1BP1
CPSF3
TCAIM
SLF2
YY1AP1
DAP3
ITFG2
COIL
RPS4X
PHACTR4
HCFC2
GLT8D2
MFSD14A
MOB4
ABCB10
BNIP1
RBL1
ZNF326
UTP11
WDHD1
SOCS4
ZNF23
AHI1
PRKRA
PJVK
KRR1
RBM28
GOSR1
SCYL3
TAF3
MRPS36
ZNF790
INO80
RBFOX2
NOXA1
PIGO
RABGGTA
PLS1
DNAJC28
PPP6R1
PFKM
SENP1
LRCH4
FBXO24
RABGAP1
ZCCHC4
NBPF1
SERBP1
PSMG1
MRPL16
CYREN
ATAD2
PRMT3
NOTCH2
TCP11L2
RCOR1
EXOC6B
TBCK
AIMP1
STMP1
RABIF
BCL9
KIAA1958
C9orf147
COPS7B
PDE6D
ZNF518A
DHX8
ATG4C
NDUFB7
HAGH
FAHD1
SEC11A
ARMC8
MRPL3
ASNS
VPS72
ZFYVE27
ZBTB40
MRPL42
SLC25A28
ATP5MC2
TSFM
TAF12
NEK2
GTF2H3
EIF2B1
BZW1
MIS18A
CFAP221
GABPB2
SNRPB
ZNF391
MTR
PEMT
ANKRD13C
LOC389831
IGSF9
NFAT5
NDUFC2-KCTD14
NDUFC2
PRR14
SH3GLB1
CCDC43
MPI
CIC
NECAP2
B4GALT3
MYCBP2
TFAM
DNAJC9
VMAC
NDUFA11
CD164
STX4
ZNF561
RMDN2
ACBD6
ZC3H6
EDC4
UFSP2
C4orf47
C2orf42
STT3B
HDAC4
COMMD2
EFCAB2
SMN2
SMN1
DCTN4
MRPL55
ATP5IF1
BLOC1S2
DDX18
SACM1L
PSMD6
SRP9
PDE4A
ZNF2
FOS
GALK2
COPS2
ARID3B
SRI
ATP5MPL
ZNF335
MARCHF8
MOB3A
IZUMO4
ZNF396
ACAT2
DAZAP2
HTR5A
ADPRS
TEKT2
CDC73
TSPAN10
NPLOC4
SPECC1
MDM4
SF3A1
CCDC157
TRMU
RBM34
TIGD5
EEF1D
SELENOW
LUC7L2
FMC1-LUC7L2
FMC1
INTS2
DHRS13
CRNKL1
CFAP61
FBXW8
MRPS5
ACTR8
RPAP3
STARD3
STX7
PEPD
ARL4A
LOC112694756
CHMP3
HOOK1
RAB18
PGBD2
KLHL12
RPL31
GIT2
ANKRD13A
NCSTN
COPA
THNSL1
SRP68
GALR2
RIF1
CCDC107
CCDC15
PPIP5K2
GIN1
TRUB2
COQ4
CBWD5
ZNF3
CBWD3
CBWD6
NUP133
THUMPD1
KAT7
CMTR2
S100A13
EXO1
DENND6A
CHTOP
VANGL2
C1orf232
ZNF593
CCAR2
C8orf58
GSPT1
CSTF2T
HDAC1
ANKRD36C
RPAP2
GLMN
XPA
OPA1
NMNAT1
LZIC
RPS3A
ZNF461
CHPF2
RPS6
ZBTB17
ABCF2
ARHGEF12
HINT3
CHEK1
USP35
KCTD21
SLMAP
IFNGR1
VPS36
CKAP2
REX1BD
XPNPEP3
ST13
DNAJB7
ANO5
MRPS18C
HELQ
STAM2
AP5S1
NCAM1
MTBP
MRPL13
HNRNPD
MRPS14
GNB2
NDFIP2
EIF4A3
RAB39B
KDM3A
RPS14
CREM
DCT
RBSN
ZKSCAN2
YWHAE
HIPK1
PGS1
MYL12B
RNF138
HYAL2
TMEM230
RBM17
PRPF40A
ARL6IP6
LRRFIP2
MYH7B
GSS
LATS1
BDP1
PTTG1IP
GTPBP4
CPLX2
MAP3K2
TOX4
RAB2B
TCP11L1
STK38L
CCDC200
MRPL58
ZNRF4
RWDD3
GPATCH3
DUS3L
TSG101
ESYT2
XRCC2
TPK1
MTMR9
RPS12
SLC2A12
HNRNPH1
C7orf25
EIF3G
LAMP1
NET1
NCOA5
ANGEL2
TXNDC17
KIAA0753
MRTO4
EMC1
WASF1
CDC40
VPS16
PCED1A
C1GALT1C1
CENPBD1
SLC25A5
ROR1
TTC13
NOTCH2NLA
ELAVL3
MRPL38
CPEB4
TSSC4
ZSWIM7
TTC19
PSMC2
DNAJC2
STK25
NAGPA
GLUL
TRIM16
BCAR3
LRRC49
THAP10
VPS33A
RAMAC
GOPC
FAM227B
DTWD1
ZFP30
RTTN
EIF2S2
HSPA9
MIA2
ASH1L
FUS
C12orf66
RARS1
ZNF180
DNAH14
TRIP10
ZMYND10
NPRL2
CYB561D2
TBC1D4
TTLL7
RGS9
GPR108
NDUFB1
CPSF2
FAM228B
SF3B6
ZNF398
ZNF425
NOTCH2NLB
GOT2
SNRNP70
ABRAXAS1
EIF3B
TTI1
RPRD1B
RPL11
DUS1L
TMEM167B
GPR84
CATSPERE
STAMBPL1
CACTIN
MECR
NDUFA10
OR6B2
ZBTB37
MTHFS
ZCCHC9
UBE3C
CASZ1
PDE11A
PSMD3
RBM45
GARS1
EXOC2
AP1G1
AKAP1
SMC3
MAPK8
HMGCL
RABGAP1L
CCDC124
TMEM106B
YIPF2
TIMM29
VPS45
MGAT1
TUBD1
RPS6KB1
ZNF627
RNF32
CLUAP1
C16orf90
GLIPR1L1
CAPS2
HBS1L
TXNDC9
EIF5B
TIMM23
DHDDS
FUCA2
FAM120B
TANGO6
PUM1
MEMO1
TMBIM6
C6orf226
CYCS
ALG9
RIOK1
CAGE1
DIMT1
ZNF564
DKK1
RTL8C
MRPL1
ANKRD36
SRSF11
LRRC40
ZNF555
ZNF429
GPHN
MRPL37
CYB5RL
SLC35B1
GBE1
IFRD2
HOMER1
TAF1B
DPP9
TMBIM4
MAGOH
BORCS7
ADPGK
MAP3K3
ZNF473
VRK3
THBS4
MTX3
SLC37A3
SPC24
WWOX
CSDE1
CNPY3
ZMYM1
QTRT2
CCDC191
CASTOR2
ZNF70
VPREB3
TMEM128
PIGK
DGAT2
C2orf49
TTC5
PRKAR1A
TTC37
ARSK
IQCH
AAGAB
CBWD1
TIAL1
GTF3C6
SIRT1
BRMS1L
TMEM131
IL10RA
SRRM3
PCBP2
GDAP1
PTCD1
CPSF4
KMT5B
TSN
MED11
CDC25C
LOC100287896
LIPT2
FAM53C
DTD1
BCL2L1
DCLRE1B
AP4B1
SH3GL1
CHAF1A
UBIAD1
SLC35D1
PCCB
FBXO31
BRIX1
UBE2Q1
AIFM1
SAAL1
ATL3
AKR1B1
ATG9B
ABCB8
P4HA1
LINS1
ASB7
EGLN1
LMBR1
RBM14-RBM4
RBM14
ELAPOR1
C1orf194
BAZ1B
WDR26
SHPK
CTNS
PTPN4
NSUN4
ZSCAN32
ZNF174
NACA
SPAG16
TARBP2
MAP3K12
PKNOX1
INAVA