ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX3474298 | LNCAP
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX10976388: 293

◢ SRX10976389: 293

◢ SRX150671: 293

◢ SRX16676305: 293

◢ SRX16676306: 293

◢ SRX17826856: 293

◢ SRX17826857: 293

◢ SRX17826858: 293

◢ SRX17826859: 293

◢ SRX17826860: 293

◢ SRX17826861: 293

◢ SRX22117740: 293

◢ SRX22117741: 293

◢ SRX22117742: 293

◢ SRX22117743: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX1799522: CD4+ T cells

◢ SRX1799525: CD4+ T cells

◢ SRX1799528: CD4+ T cells

◢ SRX1799531: CD4+ T cells

◢ SRX671999: ES cells

◢ SRX672001: ES cells

◢ SRX672002: ES cells

◢ SRX9823127: GM12878

◢ SRX9823128: GM12878

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX11220464: HT-29

◢ SRX11220465: HT-29

◢ SRX11220466: HT-29

◢ SRX9977682: HUVEC

◢ SRX1925740: iPSC derived neural cells

◢ DRX402530: K-562

◢ DRX402531: K-562

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX5457586: K-562

◢ SRX5457587: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◣ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX12813813: MCF-7

◢ SRX12813814: MCF-7

◢ SRX1497516: MCF-7

◢ SRX7030916: MCF-7

◢ SRX7030917: MCF-7

◢ SRX7030918: MCF-7

◢ SRX7030919: MCF-7

◢ DRX402534: MYL

◢ DRX402535: MYL

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

GH1
RAB37
SMCO1
KRBA1
KCNJ15
UBC
MTRNR2L8
NUF2
TTLL1
CCDC130
ZNF761
RERE
PRSS38
LOC102724265
TTLL12
MTRNR2L2
MSH3
DHFR
MMEL1
DCP1A
GBA
FAM184A
BSDC1
ITGB3BP
EFCAB7
RABGAP1
NPAS4
HTR5A
FRG2
LCE3A
LCE3B
MTRNR2L1
SLC24A1
INTS14
SLC44A1
DEFA6
STX16
PCDH1
DRG2
PARP15
ST20-MTHFS
CXCR2
ZNF623
APOA1
CLDN18
TSC22D3
KRTDAP
COMMD2
ZFP30
ZNF76
GCNT7
FAM209A
FAM207A
RNF217
MTNR1B
IFIT1B
ZNF317
TMEM229B
GNG13
NWD1
PEX3
ADAT2
TRIM9
YTHDC2
GNAL
GPD1L
GTF2H2C_2
GTF2H2
IMMT
POLE4
CADPS
ZNF670
APRT
DNAH14
OR2A12
MTF2
SUB1
EIF2D
FAM227B
DTWD1
RAD54L2
C1orf100
SLC44A2
MST1R
C2orf88
DOCK7
WDR11
FRG2C
GALK2
COPS2
SAMD4B
ZNF324B
ATP1A1
MATK
CDHR1
DNAJC22
SSBP1
FAM72C
SLAMF9
INTS5
HSD17B6
CPNE5
RBBP5
PDE7B
ACYP2
TRIP4
SF3A3
SMIM17
CTAG1B
CTAG1A
ANP32D
TPM1
SCRT2
ATP5MC2
STX6
PSMF1
INTS12
GSTCD
IPO4
DOCK3
NSFL1C
TEX38
ATPAF1
PLIN1
ALG10B
PGBD2
COL23A1
NDUFS7
NRF1
STX18
DCAF10
DNAJC25-GNG10
DNAJC25
CCNC
TIAM1
MRPL16
UIMC1
MFAP3L
FUT8
TRIM29
SRGAP2B
FAM72D
PDE11A
GTF2H2C
EPB41L4B
SRRM3
DRAM1
TMEM89
JMJD1C
REEP3
MKRN2OS
MKRN2
TRADD
FBXL8
B3GNT9
NDUFS3
KBTBD4
GABPB2
IGFALS
SLC27A5
TMED1
ZNF205
PAXBP1
BCR
HMGB1
USPL1
MRPL3
DHRS2
PRMT5
MRPL22
GEMIN5
VMO1
GLTPD2
RPL27
RNF24
NTSR2
DEGS2
DPY19L4
ANKRD40
WDFY1
SPRR2F
SRGAP2
FAM72A
AURKAIP1
TACO1
VPS13D
S100P
DMAP1
B4GALT7
TVP23B
AKIRIN1
TPBGL
TMEM41A
TRAM1
BARHL1
GNB3
LEP
USP30
FBXO17
OR10G2
MED23
LRRC59
RPS29
SLC39A13
NFAT5
TSPAN14
SEC22B
RGPD8
RGPD5
RGPD6
EXD2
SEC13
LRRC37A3
EEF2K
DSTYK
FOXO1
ANGPTL4
WDR36
ZER1
FSHB
RBBP8NL
DUX4
C10orf88
BCL9
KRTAP10-12
BCAR3
TSNAX
HMOX1
TCF7L2
KMT2A
ATR
GRM4
MTHFD2L
AKAP13
AKNA
CREG2
RHOT2
POLR2C
AADAC
PRELID3B
RGPD2
RGPD1
DYNC1LI2
PPA2
ST6GALNAC6
RPS14
TATDN3
NSL1
MNAT1
DUSP6
SCMH1
ACAA2
DCLRE1B
AP4B1
ZNF697
SRGAP2C
FAM72B
ISM1
GTPBP6
CBX1
HUS1
CDC73
GNB2
MFAP3
FAM114A2
CFAP73
PRRG2
NOSIP
AQR
LRRC10B
EPS8
DHX8
ANKRD46
FAM102A
ZNF829
ZNF568
OPA1
SPSB1
CNN2
TMEM259
PDE4C
PPFIBP2
SNRPB
HERC3
PYURF
PIGY
NEUROD4
LUC7L2
FMC1-LUC7L2
FMC1
MRPL44
EIF3F
CEP135
TCF3
DLG2
LHX6
SLC33A1
TOR1AIP2
TOR1AIP1
GRPEL2
TLE5
REXO4
ADAMTS13
YPEL1
SV2A
TMA16
ZNF354B
EGFLAM
FRG1
DUS1L
TEFM
CCSER2
TSEN15
TNFRSF13B
PPP6R1
EPRS1
TUBGCP3
SPATC1L
DYNC1I1
MAPK1IP1L
CRLF3
RNF168
TRIM16L
C16orf89
ZNF527
DAG1
IL10RB
CALM1
CABIN1
DHTKD1
CPLX2
SMARCD2
IQSEC3
TMEM39B
NUAK2
LRP2BP
DRAP1
C11orf68
RRP15
FUT10
ATP5MPL
CYREN
CHD1L
PRKAB2
STX1A
TJP3
IRAK2
POLR2J3
GTF2A1L
FXN
CD86
PHKG1
GTF3C3
CLUAP1
C16orf90
TOP3B
IRF9
SIKE1
NOD2
CLEC19A
C1orf68
SCCPDH
WWOX
CCDC88B
CLK3
ZNF621
TNFAIP3
NFKB2
USP54
FECH
VSIG10L
UBE2F
TRMT61B
UTP11
XKR8
RNF149
KRTAP10-7
CEP72
AGK
NKAIN4
FAF1
CAPN2
TMEM242
NCOA7
ALKBH3
ZNF438
VPS13B
LAMP1
FAR1
ZMIZ2
TMPRSS11F
RPS7
TTC26
BRF2
SDHAF3
EP400
ALDH3A1
C10orf95
C9orf152
ATP2C1
ANXA11
TP53I3
IGSF9
PDCD7
CCDC115
ZNF286A
ANKRD52
PLEC
TTC32
C19orf18
SLC25A51
TDP2
ACOT13
FAM98B
DDX1
CCDC107
LARS2
CERS3
GTF2H4
LPCAT4
ZNF557
ZNF197
UBA52
CIAO3
STK39
DPH6
ARHGAP40
TBCD
HPCAL4
INO80C
CCAR2
C8orf58
ZSCAN22
ANKRD36
FNTB
GLIPR1L1
CAPS2
NRG3
RPL37
DISP1
TDRD7
B3GLCT
FRAT1
C5orf49
AQP4
CHAC1
CLDN8
PPIP5K2
GIN1
ILF2
ADRM1
MRPL38
FAM71E1
EMC10
SCARF1
RILP
CTNNB1
EPB41
TBL3
MGST3
RNF151
PDS5A
BLOC1S5
MYO9B
HAUS8
SLC35G4
MED12L
CARMIL2
TNFAIP2
NME1-NME2
NME1
C8orf37
IL36RN
IL36B
ZNF350
YIPF2
TIMM29
STRBP
CACNA1S
ASCL5
TMEM43
CHCHD4
JOSD2
ASPDH
MRPL55
LTB4R
CIDEB
LTB4R2
SRD5A1
CXCL6
AP3S2
ABCA3
UCKL1
NUP155
RNF7
ANKRD2
OR4K17
SESN1
CEP57L1
CGGBP1
C3orf38
B3GAT2
RPL6
FZD1
SAYSD1
PTPN11
LUC7L
ZNFX1
TMEM222
TIPARP
AARS2
DGKA
PYM1
ASB6
RAPH1
ACKR3
ADAM22
WIZ
SYT3
FAM162A
CCDC58
NAA60
TMEM68
TGS1
TPR
ODR4
KRTAP12-2
FPR3
SEM1
TBC1D19
TUT1
HSPE1-MOB4
HSPE1
HSPD1
SNRPB2
COG2
SELENOT
USP22
SFT2D2
SNAPC2
CASZ1
RASSF8
CRISP1
NDUFB3
FAM126B
SLC39A3
FLYWCH2
KMT2C
SQSTM1
MGAT4B
KANSL3
FER1L5
FAM133B
GCFC2
HARS2
HARS1
PLK1
BPTF
CLN6
UGT2B4
UTP3
CPPED1
DNAJC11
CCDC174
RSAD1
TSPAN10
NPLOC4
KDM3B
TMEM248
SNX18
TMCO1
CCDC33
ADPRHL1
RASA2
NSUN3
DHFR2
CACNA1E
SNRPE
TBPL1
CYP51A1
CRNKL1
CFAP61
FOXN3
PSEN2
PUM1
PTPN4
POLR2J2
SNX19
DPH7
ZNF891
ZNF10
SMPD2
PPIL6
MT1X
PCBP3
ZNF721
PIGG
SCIMP
CFAP45
ZNF572
AFAP1L1
AASDH
HMGN4
NCF4
CRYAB
MLST8
C11orf52
CLDN19
FRMD5
PRR15L
MAPRE2
POLR3E
BNIP1
DGKZ
ABL1
CD55
RALGDS
OR2T1
CITED2
CCDC69
GALNT10
DUOXA1
DUOXA2
DUOX2
SGSM3
CAMKK1
SLTM
ZNF331
PRKCZ
RBBP9
GTPBP3
ANO8
KNL1
PET117
KAT14
ZNF529
ATXN2L
CRH
C7orf25
EIF3G
TET3
WDR41
MDM4
DLC1
RNF11
POGK
SIGIRR
SLC37A4
ZNF354C
BIN1
MAD1L1
TRMT5
SLC38A6
DHX16
DDX46
HES3
NAXE
KRT3
GSTM5
NBN
MTR
TARS3
VAMP4
FAM3C
ZNF33A
RGL1
CCDC112
HOXB9
FOXJ3
SLX1B
SLX1A
BOLA2B
BOLA2
PLAGL1
BOLA2-SMG1P6
CFAP36
MFSD4B
CACHD1
MKRN3
MECOM
VWC2L
C1orf115
OR10A3
CD53
OR4X2
YPEL3
SUPT7L
SLC4A1AP
C17orf75
NMNAT1
LZIC
NPL
RNF145
ZNF879
THAP4
ATG4B
GNPAT
C1orf131
CD8A
IRF5
ANKRD62
ADPRH
MRPL1
MRPS18C
HELQ
IAH1
METTL9
RBM28
EXOC2
SAXO1
ERI1
VPS37D
RRAGA
WASHC5
NSMCE2
FKTN
DNMT3B
SMIM31
HNRNPD
FBXO22
TRAF6
RAG1
ZNF582
SYT7
VPS25
TNFAIP1
IFT20
TMEM18
SPAG8
HINT2
NHSL1
ZP3
EHF
IGFBP3
MRPL21
IGHMBP2
RPS3A
METAP1
PRR14
WDR7
MTG1
EFCAB13
NDUFA2
IK
SRGAP1
MARCHF11
IL13RA1
C13orf46
BANP
FGFBP3
RNF6
TSKU
FAM24A
PABPC4
ZSCAN9
GDF11
MAP3K13
ZMYM3
TNRC18
GPRIN2
SLC26A5
RBPJ
DPP9
NDUFAF1
CLUL1
FKBP5
SARAF
VANGL1
PDHB
SLC16A1
NUDT17
CORIN
CDK5RAP1
KLHL20
RALBP1
SHF
MIER1
NDUFAB1
IBA57
MICALL2
RARS1
TMEM205
CCDC159
CYP2R1
RAB3D
ANGEL2
ERCC4
NLRX1
C4orf48
GGCX
TLL2
FETUB
FRMPD1
CYP4B1
ZRANB2
ZNF771
ERMP1
ZBTB26
ZNF562
MRPS31
ZNF554
MSL2
CYB561D1
CRBN
ZNRF4
YWHAZ
TESPA1
SPATA18
BTG1
NOMO3
NOMO2
ZFYVE19
DNAJC17
SMPDL3B
TMEM210
LRRC26
PPIG
SNX17
EIF2B4
NOTCH2NLC
POLG
PRPF18
CELF1
RABIF
ZNF484
ARHGAP22
L3HYPDH
JKAMP
STK10
ACO1
CASQ1
TSNARE1
BARX2
PKD1L1
COX16
FRA10AC1
CASC3
ALG10
DPP8
FBXW7
PPP1R8
ZNF326
BACH2
DISC1
METTL21C
ZNF530
C3orf80
ASL
ISM2
SPATA22
IGIP
BAIAP2
NOP16
HIGD2A
NUDT7
NDUFC2-KCTD14
NDUFC2
NUP214
ARAP1
TIMM9
KIAA0586
TMEM106B
FAM50B
VPS4A
PDAP1
BUD31
RABGEF1
VPS28
DUSP4
GINM1
ADRA1A
RAB3C
SCOC
TTC4
MRPL34
WDR70
RBL1
PSMA1
ZNF441
ABHD8
SORL1
DDA1
ZNF219
C11orf80
TMEM253
GPCPD1
LRRC37B
PTBP2
DOP1B
ARHGAP28
CTSH
MT1B
CFHR4
CANT1
PRKAG2
COIL
CASP8
CEP126
ANGPTL5
TCAIM
MRPS22
RNF135
TMEM14A
SPCS1
GLT8D1
GPAT3
ZDHHC3
HSPB1
EDARADD
MALL
RAMP3
SALL3
CALCB
STAT3
TIGD1
EIF4E2
FOXN1
ZNF383
KANSL1
ZNF839
JRK
ATG16L1
ZGRF1
LARP7
C19orf53
NANOGP8
XRN1
RANBP3
ZNF77
GUF1
SLC26A9
HHLA2
DNAAF4
RHBDL2
CLTB
MAGOH
MRPS14
U2SURP
OGT
EDC4
C11orf86
CRB1
CNOT6
GDPD1
MIA2
GSTO2
YJU2
RMND1
ARMT1
ZNF609
ZZZ3
ZC3H6
DPH2
TUBB
MDC1
COMMD6
POLM
UCHL3
ITM2C
FSIP2
ACAD9
VAT1L
BPI
KIAA1217
SNAP47
JMJD4
DDX18
NUP54
CRKL
CBWD5
UCHL5
RO60
TRIM7
TSC22D4
NYAP1
WASHC2C
TBRG4
LINGO1
RBM17
KIF11
HDAC11
COX10
FAM47E
PAG1
HEATR3
FAM47E-STBD1
ZKSCAN1
CREG1
SELENOH
NUP107
NOTCH2
ARHGEF12
CYP20A1
ZBED9
RPL10A
ZNHIT3
NUFIP2
PKIB
RUFY1
TXNDC15