ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1177903 | HCT 116
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX10976388: 293

◢ SRX10976389: 293

◢ SRX150671: 293

◢ SRX17826856: 293

◢ SRX17826857: 293

◢ SRX17826858: 293

◢ SRX17826859: 293

◢ SRX17826860: 293

◢ SRX17826861: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX1799522: CD4+ T cells

◢ SRX1799525: CD4+ T cells

◢ SRX1799528: CD4+ T cells

◢ SRX1799531: CD4+ T cells

◢ SRX671999: ES cells

◢ SRX672001: ES cells

◢ SRX672002: ES cells

◢ SRX9823127: GM12878

◢ SRX9823128: GM12878

◣ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX11220464: HT-29

◢ SRX11220465: HT-29

◢ SRX11220466: HT-29

◢ SRX1925740: iPSC derived neural cells

◢ DRX402530: K-562

◢ DRX402531: K-562

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX5457586: K-562

◢ SRX5457587: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX12813813: MCF-7

◢ SRX12813814: MCF-7

◢ SRX1497516: MCF-7

◢ SRX7030916: MCF-7

◢ SRX7030917: MCF-7

◢ SRX7030918: MCF-7

◢ SRX7030919: MCF-7

◢ DRX402534: MYL

◢ DRX402535: MYL

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

FRG2
FRG2C
PMF1-BGLAP
PMF1
COL23A1
MAMDC2
FANK1
LMLN2
TTLL12
KLHDC4
PHB
SUPT6H
SDF2
PMAIP1
CBX1
ZNF264
NARF
CYBC1
PAXBP1
EEF1A1
CANT1
PDXDC1
MRPS7
GGA3
POTEH
H3-3B
NDFIP1
FAM117A
SHOC2
BBIP1
FH
ATAD2
TCF7L2
NBPF1
CACUL1
MPZL1
ZMYM3
ZSCAN25
PHC2
MTRNR2L8
BAG3
TMEM71
PHF20L1
UBALD2
CYC1
CCDC137
RPL38
ZFP91
LPXN
STX12
AHI1
GRB2
USP10
THOC3
WASHC5
NSMCE2
LEMD3
ABRAXAS2
TRAP1
CCDC30
ZMYND12
PPCS
ACSL3
CTAGE8
CTAGE4
SLF2
KIAA1549
REPS1
PDCD6
DDX17
ZNF12
SMC3
TRMT1
NACC1
MCMBP
SMNDC1
C8orf76
UROS
BCCIP
EPN1
TNFAIP8
FBRS
ABCD3
EXOC6
LOC100289561
NME2
VKORC1L1
MTRNR2L2
MSH3
DHFR
EIF3F
WDR43
SMAP2
KLF5
SURF4
C10orf88
ATG16L1
ATL2
CSNK2A2
CHORDC1
EXOSC2
UBR5
ZKSCAN1
PCOTH
MIPEP
IMMP2L
ZNF652
PLEKHA1
SEC61G
DNAJB12
FBXO11
ICE1
MTMR4
SPAG9
DPP9
SEPTIN9
PPA1
TEX10
NDUFAF6
DYRK3
TACO1
C7orf25
TAF10
C15orf40
PIGF
CRIPT
SPATS2L
TSPAN10
NPLOC4
MTX2
PRKACB
BICD2
CCDC186
ST14
ABCA5
FBF1
EFR3A
SCGB1C2
PKD1
LRRC47
ARHGAP11A-SCG5
ARHGAP11A
CPT1B
CHKB
TADA1
SERF1B
SERF1A
ABL1
CEBPG
POMZP3
MTHFD2L
WAC
MYO5C
DPP8
RPS15A
MSANTD4
GLI4
TEPSIN
NDUFAF8
ZNF326
SMAD5
EIF2AK3
SEC62
KRTAP4-11
SCGB1C1
RMDN1
WAPL
PANK2
IREB2
NCBP2AS2
NCBP2
SRSF5
SIN3B
DECR1
USP7
ARHGAP29
BSPRY
ARHGAP39
HIPK1
ASPH
ACADSB
SMARCE1
IKZF5
CLK1
CCZ1
SAMHD1
EIF3A
MSRB2
E2F3
GSTO1
WNT16
ZDHHC6
VTI1A
ALAS1
EHD4
PKD2
LATS1
DSCC1
PREP
BFSP1
ESCO2
RBM42
RDH14
MRPL20
POM121C
DSTN
PLEKHA3
FKBP7
C8orf33
COPG2
MROH1
ADAR
ECE1
ETNK1
VOPP1
PIK3CA
MTDH
TMEM139
CASP2
SDR42E1
TMBIM4
CLTA
GAN
SUMO2
PDCD4
GPI
JMJD1C
RPL13
RNASEH2C
REXO2
TBC1D30
GNS
CACTIN
TM2D2
ADAM9
MTRNR2L1
FNBP1
ARF6
LSM6
RCN2
PDP1
KRCC1
CALCOCO2
FAM234B
COL4A4
COL4A3
SLC45A4
SCYL3
PIGC
TMX4
WWP1
PDXK
SLC38A2
FAM13B
ZCCHC8
SBF1
RC3H2
CRLS1
MCAT
RBM22
PIP4P1
GSK3A
SAFB
SAFB2
C11orf97
VAMP3
MEIS3
SEC22C
SS18L2
OAT
CLTCL1
CBX2
ETS2
RECK
SMARCD2
PFKM
SENP1
PHAX
YTHDF1
SEC11C
MYD88
ACAA1
USP36
FAM169A
ACOX3
TRMT44
FBXO31
KIAA1586
POMP
CCDC138
C2CD2L
RWDD2B
RBPMS
DYNLL2
KLHL41
TESK1
MKRN1
FADD
FARP2
RFT1
DUSP5
ZNF706
PLA2R1
DGKZ
GFI1B
PRPSAP1
TSC1
MS4A1
LEMD2
RPS27A
CLHC1
ELOVL5
MYLK4
HPS6
WRNIP1
IGSF3
TPT1
NPC1
ZNF623
TIGD2
KDM1A
TEX46
MRTFA
ANKRD46
FAM83D
MYBL1
RALGAPB
TMEM131L
USP33
LRCH3
RAB11B
HNRNPM
ANAPC7
GPS2
PLEKHF2
ELOB
MICU3
FAM124A
NDUFAB1
MRPL38
OXR1
PLGRKT
PRDM4
TBC1D31
ANKLE2
RAB4A
PAWR
RGS22
NOTCH2NLB
RPL7A
MED22
EFHB
RAB5A
MAPKAPK5
OSBPL5
ADIPOR1
TMEM245
DNMBP
GJB2
TMOD3
SLC25A37
EXT1
FERMT1
TBL2
ATP8B1
RAB18
AKIRIN1
PREPL
CAMKMT
EFCAB14
FLYWCH1
MEST
PGAM5
PIAS4
YPEL2
RC3H1
METTL23
JMJD6
ELOVL7
ZNF775
TMEM160
PRELID3B
FRG1
RUVBL1
EEFSEC
SOCS5
PGS1
UBE2Z
RAB5B
RP9
TMCO3
DCUN1D2
LRRC58
DNPH1
HGS
ARL16
PAG1
UTP18
MBTD1
PRDM2
INTS8
TM9SF3
OTUB1
ATP2A2
ZBTB10
ARSB
FEM1C
COX18
RAB6A
SYT1
ABI1
UBE3A
PELI1
CXCL2
GLG1
ARL8A
KRT19
ACVR1B
PDPK1
AGO2
SORBS2
PCNX2
ERO1A
DOCK5
COBL
ANGEL1
TAF5
HERC3
ANTXR2
OCIAD2
VPS13C
MGRN1
RB1
RNF169
TSPAN3
CYTH1
ANAPC11
ALYREF
FANCA
MCL1
SCN8A
DOCK1
UBE2G2
DENND10
KRT10
BMT2
LBR
SLC25A28
SUFU
ACTR1A
FBXO33
TMEM175
GAK
UBE2S
PM20D2
SLC4A7
NF1
CTNNAL1
EGFR
CHL1
NFAT5
TBPL1
SPG11
HMGCR
TRAPPC3
PEX7
GTSE1
MARCHF6
UHRF2
NEDD1
CTAGE6
TOB1
RPL7
RDH10
MAP7D1
P4HB
RAPGEF5
ACTL8
ASF1A
TERF2
FDX1
GMCL1
MAP3K3
VIPAS39
AHSA1
NAMPT
NT5C2
DYRK1A
HSP90AA1
RRAS2
APPBP2
SLC38A10
PDIA5
YWHAH
EPS8
NOTCH2NLA
CYREN
PLEKHG1
BZW1
MFSD12
NFATC2IP
ZNF607
ILKAP
HNRNPAB
PALM2AKAP2
LGALS3
PRR20E
PRR20D
PRR20C
PRR20B
PRR20A
CLTC
UBN2
TRMU
NUDT4B
GPN2
XPA
ZFYVE27
LPGAT1
SEC63
HSPA4
CLYBL
PSME1
SMARCB1
MAPK9
CDC25A
USP43
CDR2L
FRMD5
UBN1
GLYR1
FITM1
ARID2
HEBP2
ITPRIP
MRPS36
GOLGA7
CCNT2
ARFGEF1
WASHC1
CPT2
DENND2B
PPP1CB
NT5C3A
TMEM131
ITM2B
GFPT1
PSMG4
UVRAG
ALDH4A1
AP3D1
PRIM2
EPB41
RPL22
URGCP
GPX1
GATM
SPATA5L1
MIS18A
RAD23B
MAP1LC3B
OST4
STIP1
ARHGEF35
RAB2A
URGCP-MRPS24
SIRT7
CD9
ATP1A1
AGK
DYNLRB2
RNF145
MARK2
TOMM34
SSRP1
P2RX3
DCAF12
CNKSR3
MICOS10-NBL1
MICOS10
SMAD1
LRPPRC
FAM104A
PSTPIP2
PDCD5
C17orf80
GPRIN1
KRTAP4-12
NHLRC2
DCLRE1A
XPNPEP1
ARHGAP17
CD81
GPC1
ZNF577
SLC38A9
APEH
ACSF3
NUDCD1
YWHAZ
SMAD3
LSM11
SART1
ARL5A
FAM86B1
NANOGP8
ANK2
DOCK9
CRELD1
C9orf85
ABHD17B
DENND1A
SPATA6L
URB1
PLPP6
MORC4
MATN2
DHRS11
MKI67
PLCG2
POLE4
STAT3
C1GALT1C1L
CTNNB1
LRRC59
RTN4
GTF2A1L
PARK7
STX1A
SRPRB
ZC3H4
DNAJC1
CTPS1
PINK1
CLSTN1
VRK1
NOP9
DHRS1
TYRO3
RALYL
KLHL20
CRKL
MTR
OSBPL8
EEF1AKMT2
TSPAN14
DERA
SCARB1
MAGEF1
SPG7
CISD3
HSPH1
AGTPBP1
FCHO2
FBXL13
ARMC10
RABL6
CENPC
SYBU
STK3
NAF1
SEMA4D
USP6NL
TPD52
FZD6
ARHGEF3
MTAP
CXCL1
FAHD2A
KIRREL1
TGFBR2
SOD2
WTAP
PNPO
CYRIB
VPS26C
TXNDC9
EIF5B
MIF
NSD2
C10orf95
TPMT
KDM1B
MTMR12
ZCCHC14
NELFCD
ANKRD28
TMEM51
CCNJ
MTFMT
FKBP4
TMCO4
MITD1
TRAM1
PTPRF
HNRNPU
FAM53B
MIF4GD
COP1
GALNT12
SBK1
MIEF1
SINHCAF
RHOC
FAM219B
KLHL5
COPRS
SDHA
CCDC127
RHPN1
ERRFI1
LRRC37A3
ADPGK
UBQLN1
C6orf226
STAMBPL1
RNF168
COX6C
KCTD6
HASPIN
STPG1
NIPAL3
FUCA2
PGM2
SLC26A6
CHAMP1
EIF3B
EXT2
RRS1
ADHFE1
ZBTB8A
SCD5
HMGB1
CCDC88A
HACD2
GHITM
ITGA3
SRSF2
MFSD11
ZC3H7A
EYA1
SOCS3
CNN3
HIPK3
TNFSF9
ENTPD7
STMND1
FAM153B
PTPN4
FOXJ3
PHB2
DGKH
NDUFS6
MRPL36
RNASEH1
DNAJB14
ATRN
C22orf39
TTBK2
H2AZ1
HEXB
UNKL
STX17
DBNDD1
PPP6R2
RHNO1
FOXM1
RELCH
PIGN
CNNM2
MSH6
ODF2
SLK
FAM91A1
PLBD2
TICRR
GAS8
TADA2B
CCDC96
FAM110C
SCAND1
NT5DC1
KDM3B
EIF2S2
B9D1
DEF8
IWS1
PTBP3
ZNF362
KRIT1
ANKIB1
ARPC1A
MRPL12
OTULIN
B4GALT4
C2orf69
RPL14
PTP4A2
PLEKHH2
SCRN3
CIR1
MRPL52
RBM12
CPNE1
TRERF1
DUT
STX3
ELK3
DUSP6
WASHC2C
QSOX1
NLE1
DESI2
NUS1
DOCK7
PRPF19
FBXW8
PROSER1
NHLRC3
ODC1
PDZD8
NDUFV3
COG6
COA8
BAG5
CDCA7
COTL1
TANC2
PANK1
TEAD1
MLYCD
JPT1
PWWP3A
CCDC178
IRAK2
GATAD1
HDAC1
PRRC2B
YES1
PISD
RNF139
MARCHF8
DDHD2
UBFD1
EARS2
DDT
OSBP
MEF2D
EMC8
COX4I1
FBXO42
CAPN2
POMT2
GSTZ1
RCL1
TAF9
RAD17
AK6
LYRM1
DCUN1D3
UAP1
PCDHGB1
PCDHGA4
ROCK2
SLCO4A1
FEZ2
TGFB3
IFT43
DPYS
POPDC3
CYP2A13
DSTYK
ABLIM1
TMEM202
CCNY
TBC1D5
USP1
SLC17A5
PSMD1
NANP
NDRG1
AEBP2
EIF4H
DLG4
SPOPL
TBXAS1
MPP5
PARP8
FAM135A
HIPK2
NCOA2
ACADVL
H2AX
SH3GL2
CHD5
HSPE1-MOB4
HSPE1
HSPD1
CELF1
ZBTB20
RANGAP1
NEK7
SCN11A
TBC1D14
C1QBP
WDR48
GPT2
ARF1
PPP1R9B
POLR2D
SPIRE2
TPST1
CUX1
RAI1
UBALD1
EZR
BPHL
MNT
NEO1
SMC4
IFT80
STIMATE-MUSTN1
STIMATE
UBAC1
DAP
SOHLH2
ARNTL2
TOMM22
PDCD2
UROD
HECTD3
PLA2G2A
MBNL1
STRN
TRIB1
DDX21
RTRAF
GSKIP
ATG2B
STXBP4
COX11
CSNK2A1
CRY2
ATP13A2
KDF1
ACTR5
SLC12A5
ERI3
SERINC2
HOXB9
KCTD9
CDCA2
DFFB
CEP104
NBEA
CHIC2
TNPO1
OR4K3
THAP12
GVQW3
STRIP1
ZBTB4
SLC35G6
POLR2A
DTD2
PKIG
PPP2CA
CCT2
TBCCD1
DNAJB11
INO80
IDE
UBE2D1
DBNL
AFAP1
ZC3H18
PEX2
DLG1
LOC389199
HMGN2
SDCBP
EXOSC10
CERS6
SRPK1
EIF5
ATP11A
SLC25A25
STX7
SEC16A
C9orf163
ZNF704
SLX4
SETD7
TJP2
NAIF1
SRP72
SH3PXD2B
ZNF134
TRUB2
COQ4