ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX3474299 | LNCAP
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX10976388: 293

◢ SRX10976389: 293

◢ SRX150671: 293

◢ SRX16676305: 293

◢ SRX16676306: 293

◢ SRX17826856: 293

◢ SRX17826857: 293

◢ SRX17826858: 293

◢ SRX17826859: 293

◢ SRX17826860: 293

◢ SRX17826861: 293

◢ SRX22117740: 293

◢ SRX22117741: 293

◢ SRX22117742: 293

◢ SRX22117743: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX1799522: CD4+ T cells

◢ SRX1799525: CD4+ T cells

◢ SRX1799528: CD4+ T cells

◢ SRX1799531: CD4+ T cells

◢ SRX671999: ES cells

◢ SRX672001: ES cells

◢ SRX672002: ES cells

◢ SRX9823127: GM12878

◢ SRX9823128: GM12878

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX11220464: HT-29

◢ SRX11220465: HT-29

◢ SRX11220466: HT-29

◢ SRX9977682: HUVEC

◢ SRX1925740: iPSC derived neural cells

◢ DRX402530: K-562

◢ DRX402531: K-562

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX5457586: K-562

◢ SRX5457587: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◣ SRX3474299: LNCAP

◢ SRX12813813: MCF-7

◢ SRX12813814: MCF-7

◢ SRX1497516: MCF-7

◢ SRX7030916: MCF-7

◢ SRX7030917: MCF-7

◢ SRX7030918: MCF-7

◢ SRX7030919: MCF-7

◢ DRX402534: MYL

◢ DRX402535: MYL

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

MTRNR2L2
MSH3
DHFR
KCNJ15
MTRNR2L8
MTRNR2L1
KRBA1
CLDN18
PAXBP1
RAB37
RGPD2
RGPD1
SMCO1
OR4K17
H4C8
LCE3A
LCE3B
TSC22D3
GBA
TTLL1
RAPH1
MMEL1
TMEM89
BSDC1
HTR5A
SNAP47
JMJD4
ILF2
TINAGL1
APOA1
NDUFS7
ZMYM3
ZNF317
UBC
DCP1A
C19orf18
RBBP5
LOC102724265
FBXO31
ZNF761
MATK
COX16
TDP2
ACOT13
TRIM9
ST20-MTHFS
FUT8
DEFA6
B4GALT7
CASC3
EPS8
FAM184A
TMEM259
TOP3B
NGB
TEX38
ATPAF1
EIF2D
ZNF76
TBC1D19
RD3L
ATP5MC2
RAB5IF
STK39
FAM227B
DTWD1
NPAS4
FRG2
SLC44A1
DRAP1
C11orf68
USP30
SUB1
AURKAIP1
RAD54L2
TMEM43
CHCHD4
BLK
TNFRSF13B
HSD17B6
TPM1
GCNT7
FAM209A
WDR11
DEGS2
CCDC130
DDX1
COMTD1
OR4X2
RERE
KRTAP9-6
COL23A1
COMMD2
RPS14
TACO1
S1PR4
DMAP1
JAK1
ITGB3BP
EFCAB7
SLC33A1
NCOA7
ZCCHC4
CCDC88B
BARHL1
CXCR2
NUF2
WWOX
RAB11FIP1
MRPL38
S100P
KATNBL1
WDFY1
TOR1A
CORIN
SAMD4B
NCBP3
KNL1
POLN
HAUS3
DPH6
ANAPC1
METTL15
KIF18A
HMGB1
USPL1
ZNF670
PDE7B
PRSS38
RGPD8
RGPD5
RGPD6
IQSEC3
MZT2A
FSIP2
LEP
ATP1A1
MTNR1B
TATDN3
NSL1
RHEX
ANKRD20A1
RRP15
NDUFS2
ADAMTS4
FETUB
RPS29
SNX19
BCR
GPD1L
PPP6R1
TSPAN10
NPLOC4
SYT3
ACYP2
IGFALS
ZFP30
PIGW
MYO19
FAM98B
FAM25E
NEUROD4
MRPL28
C2orf88
DSTYK
CIZ1
DNM1
CDHR1
STX18
IPO4
TTYH1
DUX4
MTF2
CALM1
TOR1AIP2
TOR1AIP1
MRPL21
IGHMBP2
ZPBP2
IKZF3
MAP3K7CL
FAF1
RTTN
ARSD
DUS1L
PRSS22
SCRT2
SLC24A1
INTS14
FOXN1
CRH
GNG13
TMEM229B
STRBP
TRIP4
RAG2
IFTAP
FAM174B
CLEC19A
AP3S2
IRAK2
SMIM17
COPS4
COG2
SPTBN4
ZFP37
BLVRB
CALCB
DRG2
CLTB
CDC73
RPS6KB2
SF3A3
TTLL12
SCARF1
RILP
RNF217
GNAL
PLK1
PCYT1A
IAPP
RPS7
TEFM
CCDC92B
SCIMP
NAB2
TRAM1
GRM4
PDE8A
ALG10B
NUP107
CNTNAP4
MKRN2OS
MKRN2
CFHR4
ZER1
CXCL8
KRTDAP
SLC38A10
FRA10AC1
GPAM
OR2AP1
ISM1
LHX6
KCNH7
UBE2F
TLE5
EPRS1
NUDT15
MRPS31
POLE4
PSMD9
HPD
PCDH1
SELENOH
GPX3
CYP17A1
UTP3
ELAVL3
FGD4
CSRP1
HARS2
HARS1
KLHL12
WASHC3
POLG
PARP2
TMED1
CACNG4
RHOT2
RAF1
NCOA3
OR10A3
SHTN1
NSFL1C
PARP15
GSTM5
SLC25A51
DPP9
CCDC115
USP2
RABGAP1
UIMC1
CERS3
RPL22L1
CAPN2
ATAD2B
ZNF527
CCDC107
CEBPA
ABLIM1
HIBADH
AARS2
TRIM52
COL6A1
RABGGTA
SNX18
TFAP4
PNPLA6
NUAK2
PRKAR2A
THG1L
HECTD2
SYK
CLUAP1
C16orf90
TMC7
KRTAP10-12
GINS1
SLF1
KIAA0825
LIMCH1
ADRM1
STX6
TYW3
CRYZ
NINJ1
CFAP73
FRG2C
THEM4
YPEL3
TATDN2
AADACL4
MBOAT4
EXTL2
ZNF562
GTPBP6
DUSP6
FAM153B
DBNDD2
PDE11A
GORASP2
SNCG
MMRN2
CTAG1B
CTAG1A
SARS2
MRPS12
FEM1C
CBX1
ZNF572
COL18A1
TXNRD2
TBX6
APOBEC3B
ZNF324B
ARHGAP39
BCAR3
SSBP1
TLR2
SUMO3
LUC7L2
FMC1-LUC7L2
FMC1
MON2
PRRT1B
ANP32D
PUM1
STX16
SCCPDH
RFC1
GPRC5C
CNOT3
FAAH
MED23
SDR42E1
RBPJ
ST6GALNAC6
CEP85
SLC1A7
ACAA2
BAAT
NME1-NME2
NME1
ADCY10
IL21R
PEX3
ADAT2
BANP
SLC27A5
YWHAQ
ZNF117
SEM1
TMEM41A
ZNF623
INTS12
GSTCD
TMEM242
RPL27
SATB1
SULT1C3
CEP72
PPIG
JMJD1C
RABGAP1L
RBM33
ZMPSTE24
PLEC
ZNFX1
IFT88
NDUFB3
FAM126B
TMEM70
ELOC
MRPL44
ZNF577
IL36A
NOS3
KMT2A
GDPGP1
CIB1
TTC32
MROH7
DCAF10
NARF
CALD1
HERPUD2
MAPRE2
ACOX3
ZNF426
TMEM14C
GTF2H2C_2
SKP2
LMBRD2
GTF2H2
POLR2J3
APOL4
CLK4
TRMT44
GTF2H2C
ENG
RPL37
DPY19L4
GALNT1
DNAJC25-GNG10
DNAJC25
PRELID3B
PNPLA7
PAFAH2
ADI1
ZSCAN31
ZNF561
POLR3B
CYBC1
TMEM62
RBBP9
NME4
KDM3A
ZNF792
LMLN2
TFPT
PRPF31
ZNF408
ARHGAP1
GSTA4
CAT
SMARCD2
YTHDC2
CLDN16
PPIP5K2
LIPA
GIN1
CCDC59
ZNF134
PSEN1
PDCD7
PIK3R1
FRG1
DNAJB12
TIGD2
GTF3C3
REEP3
EIF3F
MAD1L1
TMEM68
TGS1
THAP11
NUTF2
VTA1
NMBR
SFT2D3
SUPT7L
SLC4A1AP
RPL11
GTF2H4
ANKRD54
LSG1
INTS5
AUH
YJU2
EIF3L
CENPT
MRPL40
HIRA
BAIAP2
ACTL8
ZNF32
YY1AP1
DAP3
SMG8
STAT3
CATIP
REXO4
ADAMTS13
CCDC200
GLO1
ZNF341
MSRA
BMS1
CDK5RAP1
MMACHC
CCDC163
WDR36
TMEM44
KDM1A
GCNT3
ITGA4
LCN8
SNIP1
DNALI1
THOC5
CAMK1D
FGD3
INO80C
RNF187
EIF1AD
BANF1
ZNF841
ESR2
PRIM2
ORC4
MBD5
REN
ZNF829
ZNF568
PPP1R11
ZBTB45
SCAND1
COPS7B
DEK
SUPT6H
SDF2
SCMH1
WDR74
C3orf14
PSMF1
KANSL3
FER1L5
SLC2A7
SLC41A3
LARP1
SGCE
PEG10
SNX17
EIF2B4
FAM207A
TTC26
EFCAB10
TRUB2
COQ4
POLR3E
TMEM222
NEMF
SAR1B
CCSER2
SLC29A2
FAM133B
FGFBP3
CCDC97
ATR
ZNF571
ZNF540
NBN
ZNF391
SPAAR
RMND1
ARMT1
TSEN15
C1orf167
AKAP10
MTIF2
GALK2
MOB4
MRPL1
BNIP1
C17orf75
IST1
WDR43
METTL8
DCAF17
GTPBP3
ANO8
LGR5
MRPS18C
HELQ
CD47
SMIM31
MMP7
KLHL20
ATP9B
C1GALT1C1L
ZBTB40
ZNF226
TUT1
DUSP16
GABPB2
ARID1A
TMEM79
SMG5
SCNM1
LYSMD1
NOTCH2NLC
NFE2L3
CANT1
HSPE1-MOB4
HSPE1
HSPD1
MRPS23
SAMD4A
GASK1A
TEX46
TTI2
NSA2
GFM2
OTUD7A
CCNC
DDX18
WDR55
C16orf54
ANXA2
COLEC11
TMX2
MED19
OAZ3
CFAP298-TCP10L
CFAP298
ATF7IP
MRPL48
CTNNB1
HYAL1
RUVBL1
KIAA1549
NRBP2
ZNF566
FASTKD1
GTF3C5
SNRPB
NDUFAF1
HACL1
BTD
ZSCAN25
CPPED1
RAB30
MLEC
EXO5
CASP4
LZTR1
RTCA
SEC13
STAU1
MNAT1
PIN4
NUP54
MAN2C1
MITD1
C8orf37
TTC4
SERHL2
TPR
ODR4
AFAP1L1
ZNF609
LSS
NR1H3
ACP2
FBXL12
SLC45A4
ANK3
CLDN4
INPP5F
TMEM101
RMDN2
CCNI
SERPINB1
OPA1
NDUFS3
KBTBD4
CD14
PCP4L1
RPS20
ADPRS
ADNP
KLRD1
PDE6D
CCAR2
C8orf58
MTBP
MRPL13
CHD1L
GOLGA5
TLNRD1
PRPF18
GMPS
COX7A2
SUGCT
MPLKIP
TEKT2
NOP16
HIGD2A
C18orf21
TMBIM4
PSRC1
GRPEL2
SLTM
BRF2
FAM228B
FABP6
BRWD1
CCDC150
MED18
SNRPD1
RNASET2
REM1
DEFB124
TIPARP
SLC35E2A
DCLRE1B
AP4B1
IAH1
TSFM
DGKZ
ING2
SDHAF3
NAA20
METTL9
SRSF7
ALKBH3
SLC35A3
SF3B6
SLC39A13
CRKL
HNRNPD
TRIM38
PHIP
ZNF398
KRTAP10-8
ZNF772
CCNT1
COPS2
SLC38A9
HUS1
ADAR
RANBP1
UBLCP1
EIF3E
ZNF292
TPK1
MRPL34
TIMM22
SESN1
PSMD3
POLR1H
NECAP2
SMU1
AMD1
LRIG2
TRMT2A
VIRMA
MRPL3
SNRPB2
RAB18
TGFBR2
LRP6
PRDX3
ALG10
PLEKHM3
N4BP2L2
RPL26L1
LRRC37A3
TEX50
CDYL
CADM2
ZNF280D
SEC23B
AGK
PRRC1
GFI1B
MTOR
LONRF2
SMG7
FBXO38
TTC13
CCR6
SEC22B
SCGB1C1
CALCRL
LNPEP
MTR
PUS10
PEX13
WWTR1
CENPV
TIGD1
EIF4E2
WBP1
MAGOH
INO80B
KAT6A
RNF125
SACM1L
DLAT
ZNF605
NFAT5
R3HCC1
ZNF165
CCDC88A
RBM45
ZSCAN30
PIP4P2
SNRPE
COA6
CEP57L1
NBPF1
CDK19
PDCD6IP
LSM5
CRYAA2
CRYAA
ZNF554
CASP10
DHRS2
PIH1D2
NKAPD1
ANKRD40
RPL5
TARS3
PPP5D1
CALM3
MRPS14
PPIAL4F
PPIAL4E
PPIAL4D
LPIN1
TRMT5
SLC38A6
TSGA10
C2orf15
CLTC
STOML2
TIAM1
RPS15
ZNF438
HAX1
KMT2D
AVL9
ACSM2B
ZSCAN22
SRRM3
MYCBP2
SNRPD3
GUCD1
RNF6
PSMD6
DPP8
AAR2
SUGT1
FAM234A
GABPA
ATP5PF
VPS13B
SPSB1
MSL2
TEX9
RFX7
PRKAG2
CEP85L
SRP9
CASS4
PPP2R5B
PRMT5
POM121L2
SMIM13
KRR1
THAP6
TTC5
U2SURP
NMNAT1
LZIC
H4C12
MRPL16
C10orf88
CLUL1
ZNF383
MFF
ZNF512B
TMEM42
CEP120
ITFG2
YTHDF2
PRKAB2
CDIPT
SLC35E2B
MAPK1IP1L
HLA-E
TBCK
AIMP1
PRPSAP1
STK19
DXO
CREM
MRPL39
NOXA1
ITGAL
RBM28
RPS3A
CBWD5
EPB41
SEL1L
DHX16
ZZZ3
RCAN1
PCBP2
NOTCH2NLA
MRPS33
HIP1
GSPT1
ERCC6L2
GCNT1
SGMS2
TBL1X
PTPN4
SLC35B1
CNN2
GLIPR1L2
LRRC59
ATG101
ZNF385A
RRN3
ZNF439
ZNF546
SLC35G5
MRPL19
PPP1R3B
SDCCAG8
CEP170
FBXO22
TRDMT1
PDRG1
EEA1
LTA4H
ARRDC2
ZNF425
SEC14L1
H4C11
NSUN4
NDFIP1
RPS19
HEATR4
TFPI
ASF1A
PFKM
MAP1LC3B2
DHTKD1
MEMO1
SOD2
RALBP1
TULP4
GNB2
ZNF518A
HNRNPA1L2
DNAJC11
SAE1
CDK12
CYB561D1
XKR7
RESF1
HEXIM1
METAP1
KIF2C
CELF2
PES1
ARMH3
MED4
ZNF846
PHF21A
IFI44
CNOT11
RTN4
TSC1
PAK1IP1
INTS2
C6orf52
CYB5A
ACBD6
SET
STC1
NUDT9
SEC14L5
ATG4C
ZNF770