ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX17826860 | 293
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX10976388: 293

◢ SRX10976389: 293

◢ SRX150671: 293

◢ SRX16676305: 293

◢ SRX16676306: 293

◢ SRX17826856: 293

◢ SRX17826857: 293

◢ SRX17826858: 293

◢ SRX17826859: 293

◣ SRX17826860: 293

◢ SRX17826861: 293

◢ SRX22117740: 293

◢ SRX22117741: 293

◢ SRX22117742: 293

◢ SRX22117743: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX1799522: CD4+ T cells

◢ SRX1799525: CD4+ T cells

◢ SRX1799528: CD4+ T cells

◢ SRX1799531: CD4+ T cells

◢ SRX671999: ES cells

◢ SRX672001: ES cells

◢ SRX672002: ES cells

◢ SRX9823127: GM12878

◢ SRX9823128: GM12878

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX11220464: HT-29

◢ SRX11220465: HT-29

◢ SRX11220466: HT-29

◢ SRX9977682: HUVEC

◢ SRX1925740: iPSC derived neural cells

◢ DRX402530: K-562

◢ DRX402531: K-562

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX5457586: K-562

◢ SRX5457587: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX12813813: MCF-7

◢ SRX12813814: MCF-7

◢ SRX1497516: MCF-7

◢ SRX7030916: MCF-7

◢ SRX7030917: MCF-7

◢ SRX7030918: MCF-7

◢ SRX7030919: MCF-7

◢ DRX402534: MYL

◢ DRX402535: MYL

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

MTRNR2L2
MSH3
DHFR
MTRNR2L1
COL23A1
MTRNR2L8
FRG2C
DUX4
FRG2
GTPBP6
SMARCD2
GBA
ITGB3BP
EFCAB7
EPN1
RPS7
CCDC200
POLR2J3
CRYAA2
CRYAA
RBBP5
LINGO1
TOR1AIP2
TOR1AIP1
PRPSAP1
YIPF2
TIMM29
ZNF76
ATXN7L2
FRA10AC1
BRWD1
DCP1A
TEX19
STX16
TMEM222
NDUFS7
MRPS23
CCDC97
TMEM101
MED23
PEX3
ADAT2
DRG2
EIF3F
SNRPD3
GUCD1
DSTYK
FAM207A
TTC4
WASHC1
PAXBP1
BANP
PSD
FBXL15
NUF2
NME1-NME2
NME1
YARS1
S100PBP
SSBP1
USP30
SCNM1
LYSMD1
C18orf21
SPATC1L
STMN3
RTEL1
INTS12
GSTCD
NSFL1C
MAN2C1
CASC3
MRPL44
INO80C
SNAP47
JMJD4
LRP6
TTC26
IPO4
MRPL48
TATDN3
NSL1
NSA2
GFM2
LMAN2
RBL1
ZNF165
SMG8
WBP1
INO80B
KAT6A
ZNF408
ARHGAP1
GTF3C3
KMT2A
SUPT7L
SLC4A1AP
METTL9
SLC39A3
ZNF335
TMEM242
PSMF1
WDR11
RPL37
UTP3
MRPS31
RPL5
DCAF10
SEC13
LRRC59
GTF2H4
REXO4
ADAMTS13
KDM3A
TACO1
STX6
THEM4
GTF2H2
GTF2H2C
DRAP1
C11orf68
AP3S2
RUVBL1
UBE3B
EEFSEC
PEF1
BMS1
TCF3
STAT3
GTF3C5
GFI1B
TSC1
ARL8B
BNIP1
ZBTB45
CDIPT
GTF2H2C_2
AGK
B4GALT7
PSMD3
NCBP3
RFXANK
BORCS8
KDM5C
PAFAH2
CDK5RAP1
NDUFS3
KBTBD4
ITFG2
STAT1
PDE12
TXNIP
NDUFAF1
SMG7
MTF2
COX16
MRPS18C
HELQ
MRPL39
MCOLN1
UPF2
AURKAIP1
NOP16
HIGD2A
LRRC37A3
GOSR2
TSNAX
DNAJB12
MAPK1IP1L
PRRG2
NOSIP
TMEM167B
TAOK3
PTPN21
MRPL55
NLRX1
SUDS3
FRAT1
SLC24A1
INTS14
RRP15
TOMM22
FXN
TOP3B
PEMT
PDE4A
COMMD2
INTS5
HSPE1-MOB4
HSPE1
HSPD1
SLC35A3
SLC35B1
TXN2
DMAP1
NMNAT1
LZIC
ALG13
ZER1
ARHGEF1
NDUFB3
FAM126B
TBC1D19
BRF2
ALKBH3
ZSCAN22
C11orf49
ZNF296
GEMIN7
HDAC2
STX18
DPY19L4
CLTC
SOD2
DCT
WTAP
RNF187
MRPL3
PSMB7
CCDC59
NUP54
DDX1
RPL29
BBS1
EIF2D
ZSCAN30
DYNC2I1
SCAND1
METTL18
C1orf112
UCKL1
RBM17
COQ3
PRPF18
YTHDF2
ZBTB40
RWDD1
HEMK1
C3orf18
FZD1
SELENOH
RPS3A
HEXA
ZDHHC6
VTI1A
IPO13
SNX12
MRPS33
WASHC2A
TIMM22
NUP205
AJUBA
BAZ2A
NKAP
FAM187A
EFTUD2
CCDC103
MRPL21
IGHMBP2
ZNF398
ZNF425
TVP23B
UFSP2
C4orf47
SLC39A6
RTTN
CCNC
PET117
KAT14
VPS25
TSEN54
CASKIN2
NPAS4
POLG
WASHC2C
ZRANB2
CCDC86
KMT2D
PKM
TMA16
SRI
ZNF524
FIZ1
SLC44A1
ANGEL1
QTRT1
NOTCH2NLC
SF3A3
MRPL40
HIRA
RPL6
FBXO31
DHX40
ADPRS
TEKT2
KCNJ15
KRBA1
SMCO1
GCNT7
FAM209A
YPEL3
TATDN2
AADACL4
BSDC1
UBE2F
MBOAT4
TMEM89
IRAK2
EXTL2
ZNF562
DUSP6
FAM153B
DEGS2
DBNDD2
PDE11A
GORASP2
SNCG
MMRN2
CTAG1B
CTAG1A
FAM184A
SARS2
MRPS12
ST20-MTHFS
RABGAP1
TMEM229B
FEM1C
CBX1
ZNF572
COL18A1
TXNRD2
APOA1
TBX6
FAM227B
DTWD1
APOBEC3B
BCR
ZNF324B
ZNF761
ARHGAP39
BCAR3
LEP
TLR2
SUMO3
SAMD4B
LUC7L2
FMC1-LUC7L2
FMC1
OR4K17
C2orf88
MON2
PRRT1B
ANP32D
PRSS38
PUM1
SCCPDH
ACYP2
GSTM5
RFC1
GPRC5C
CNOT3
FAAH
SDR42E1
RBPJ
ST6GALNAC6
CEP85
SLC1A7
ACAA2
BAAT
IGFALS
ADCY10
RPS29
CCDC130
IL21R
SLC27A5
YWHAQ
ZNF117
TTLL12
SEM1
TMEM41A
ZNF623
RAB37
CALCB
RPL27
SATB1
SULT1C3
CEP72
PPIG
JMJD1C
RABGAP1L
RBM33
ZMPSTE24
PLEC
ZNFX1
IFT88
TMEM70
ELOC
ZNF577
IL36A
GPD1L
NOS3
GDPGP1
CIB1
TTC32
POLE4
MROH7
C19orf18
CYP17A1
HMGB1
NARF
CALD1
HERPUD2
MAPRE2
ACOX3
ZNF426
USPL1
TMEM14C
ZFP30
TMEM43
CHCHD4
CFHR4
SKP2
LMBRD2
TRIP4
APOL4
ZNF317
CLK4
TRMT44
ENG
GALNT1
DNAJC25-GNG10
DNAJC25
PRELID3B
PNPLA7
ATP1A1
ADI1
SLC33A1
ZSCAN31
ZNF561
POLR3B
CYBC1
TMEM62
RBBP9
NME4
ZNF792
LMLN2
TFPT
PRPF31
RERE
RPS14
GSTA4
CAT
YTHDC2
CLDN16
PPIP5K2
LIPA
GIN1
ZNF134
PSEN1
PDCD7
ALG10B
PIK3R1
RAD54L2
FRG1
SLC25A51
TIGD2
REEP3
TDP2
ACOT13
MAD1L1
TMEM68
TGS1
THAP11
NUTF2
VTA1
NMBR
SFT2D3
RPL11
ANKRD54
PARP15
LSG1
EPS8
AUH
YJU2
EIF3L
CENPT
BAIAP2
ACTL8
ZNF32
YY1AP1
DAP3
CATIP
GLO1
ZNF341
MSRA
MMACHC
CCDC163
WDR36
TMEM44
PPP6R1
HTR5A
KDM1A
GCNT3
ITGA4
TEFM
LCN8
SNIP1
DNALI1
THOC5
CAMK1D
FGD3
EIF1AD
BANF1
ZNF841
ESR2
PRIM2
ORC4
MBD5
REN
ZNF829
ZNF568
PPP1R11
GINS1
COPS7B
DEK
SUPT6H
SDF2
SCARF1
SCMH1
WDR74
C3orf14
KANSL3
FER1L5
SLC2A7
ILF2
SLC41A3
ATP5MC2
LARP1
SGCE
PEG10
SNX17
EIF2B4
EFCAB10
TRUB2
COQ4
POLR3E
RILP
HSD17B6
NEMF
SAR1B
CCSER2
SLC29A2
DUS1L
FAM133B
FGFBP3
ATR
ZNF571
ZNF540
NBN
ZNF391
SPAAR
RMND1
ARMT1
TSEN15
C1orf167
AKAP10
MTIF2
GALK2
MOB4
MRPL1
DPP9
C17orf75
IST1
WDR43
METTL8
DCAF17
GTPBP3
ANO8
LGR5
CD47
SMIM31
MMP7
KLHL20
ATP9B
C1GALT1C1L
ZNF226
TUT1
DUSP16
GABPB2
ARID1A
TMEM79
SMG5
COPS4
NFE2L3
CANT1
SAMD4A
NCOA7
GASK1A
TEX46
TTI2
OTUD7A
DDX18
WDR55
C16orf54
ANXA2
COLEC11
TMX2
MED19
OAZ3
CFAP298-TCP10L
CFAP298
ATF7IP
CTNNB1
HYAL1
KIAA1549
NRBP2
ZNF566
FASTKD1
SNRPB
HACL1
BTD
ZSCAN25
CPPED1
RAB30
MLEC
EXO5
CASP4
LZTR1
RTCA
STAU1
CLTB
MNAT1
PIN4
MITD1
C8orf37
SERHL2
TPR
ODR4
AFAP1L1
ZNF609
LSS
NR1H3
ACP2
FBXL12
SLC45A4
ZCCHC4
ANK3
CLDN4
INPP5F
H4C8
RMDN2
CCNI
SERPINB1
OPA1
CD14
PCP4L1
RPS20
ADNP
KLRD1
PDE6D
CCAR2
C8orf58
MTBP
MRPL13
CHD1L
GOLGA5
TLNRD1
GMPS
COX7A2
SUGCT
MPLKIP
TMBIM4
PSRC1
EPRS1
GRPEL2
TPM1
SLTM
GPAM
FAM228B
FABP6
CCDC150
MED18
SNRPD1
RNASET2
REM1
DEFB124
TIPARP
SLC35E2A
DCLRE1B
AP4B1
IAH1
TSFM
DGKZ
ING2
SDHAF3
NAA20
PARP2
SRSF7
LOC102724265
SF3B6
PIGW
MYO19
SLC39A13
CRKL
HNRNPD
TRIM38
ADRM1
PHIP
MATK
KRTAP10-8
ZNF772
CCNT1
COPS2
SLC38A9
HUS1
ADAR
RANBP1
UBLCP1
EIF3E
ZNF292
TPK1
MRPL34
SESN1
POLR1H
NECAP2
CLUAP1
SMU1
AMD1
TTLL1
LRIG2
CDC73
TRMT2A
VIRMA
SNRPB2
RAB18
TGFBR2
PRDX3
ALG10
PLEKHM3
N4BP2L2
RPL26L1
TEX50
CDYL
FAM98B
CADM2
ZNF280D
SEC23B
PRRC1
MTOR
LONRF2
FBXO38
TTC13
CCR6
SEC22B
SCGB1C1
CALCRL
LNPEP
MTR
PUS10
PEX13
WWTR1
CENPV
TIGD1
EIF4E2
MAGOH
RNF125
SACM1L
DLAT
ZNF605
NFAT5
TMED1
R3HCC1
CCDC88A
RBM45
PIP4P2
AARS2
SNRPE
COA6
CEP57L1
NBPF1
CDK19
PDCD6IP
LSM5
ZNF554
FOXN1
CASP10
DHRS2
PIH1D2
NKAPD1
ANKRD40
TARS3
PPP5D1
CALM3
MRPS14
PPIAL4F
PPIAL4E
PPIAL4D
LPIN1
TRMT5
SLC38A6
TSGA10
C2orf15
STOML2
TIAM1
RPS15
ZNF438
HAX1
AVL9
ACSM2B
SRRM3
MYCBP2
RNF6
PSMD6
DPP8
AAR2
SUGT1
FAM234A
GABPA
ATP5PF
VPS13B
SPSB1
MSL2
TEX9
RFX7
PRKAG2
CEP85L
SRP9
CASS4
PPP2R5B
PRMT5
POM121L2
SMIM13
KRR1
THAP6
TTC5
U2SURP
H4C12
MRPL16
C10orf88
WWOX
CLUL1
ZNF383
MFF
ZNF512B
TMEM42
CEP120
PRKAB2
TRAM1
SLC35E2B
HLA-E
TBCK
AIMP1
STK19
DXO
CREM
NOXA1
ITGAL
RBM28
CBWD5
EPB41
SEL1L
DHX16
ZZZ3
RCAN1
PCBP2
NOTCH2NLA
HIP1
GSPT1
ERCC6L2
GCNT1
WDFY1
SGMS2
TBL1X
PTPN4
CNN2
NUP107
GLIPR1L2
ATG101
ZNF385A
RRN3
ZNF439
TMEM259
ZNF546
SLC35G5
MRPL19
PPP1R3B
SDCCAG8
CEP170
FBXO22
TRDMT1
PDRG1
EEA1
LTA4H
ARRDC2
SEC14L1
H4C11
NSUN4
NDFIP1
RPS19
HEATR4
TFPI
ASF1A
PFKM
MAP1LC3B2
DHTKD1
MEMO1
RALBP1
TULP4
GNB2
ZNF518A
HNRNPA1L2
DNAJC11
SAE1
RABGGTA
KNL1
CDK12
CYB561D1
XKR7
RESF1
HEXIM1
METAP1
KIF2C
CELF2
ELAVL3
PES1
OR2AP1
ARMH3
MED4
ZNF846
PHF21A
IFI44
CNOT11
RTN4
PAK1IP1
INTS2
C6orf52
CYB5A
ACBD6
SET
MMEL1
STC1
NUDT9
SEC14L5
ATG4C
CCDC115
ZNF770
TMEM65
MTMR6
FAM13A
LMBR1L
UGCG
TLR1
ATG5
ABCC10
FLT3LG
TM9SF4
EIF2B3
CUL2
RIF1
NT5DC1
DISP1
SMIM12
POLR2E
LRRC61
HEATR1
QRICH1
PRAME
ZNF3
YBEY
RUNX2
MCM3AP
C2CD5
MRPS15
RPS26
WDR70
POLR3GL
ANKRD34A
FAIM
ATP5MC3
RPL38
INTS4
P3H4
FKBP10
RAB5C
CIZ1
CRBN
IQSEC3
FOXJ3
CBR1
ALG14
GARS1
PTGES2
INKA2
DDX20
TMBIM1
CNGA1
SETD1A
ZNF527
COG2
GTF2A1L