ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5457586 | K-562
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX10976388: 293

◢ SRX10976389: 293

◢ SRX150671: 293

◢ SRX16676305: 293

◢ SRX16676306: 293

◢ SRX17826856: 293

◢ SRX17826857: 293

◢ SRX17826858: 293

◢ SRX17826859: 293

◢ SRX17826860: 293

◢ SRX17826861: 293

◢ SRX22117740: 293

◢ SRX22117741: 293

◢ SRX22117742: 293

◢ SRX22117743: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX1799522: CD4+ T cells

◢ SRX1799525: CD4+ T cells

◢ SRX1799528: CD4+ T cells

◢ SRX1799531: CD4+ T cells

◢ SRX671999: ES cells

◢ SRX672001: ES cells

◢ SRX672002: ES cells

◢ SRX9823127: GM12878

◢ SRX9823128: GM12878

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX11220464: HT-29

◢ SRX11220465: HT-29

◢ SRX11220466: HT-29

◢ SRX9977682: HUVEC

◢ SRX1925740: iPSC derived neural cells

◢ DRX402530: K-562

◢ DRX402531: K-562

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◣ SRX5457586: K-562

◢ SRX5457587: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX12813813: MCF-7

◢ SRX12813814: MCF-7

◢ SRX1497516: MCF-7

◢ SRX7030916: MCF-7

◢ SRX7030917: MCF-7

◢ SRX7030918: MCF-7

◢ SRX7030919: MCF-7

◢ DRX402534: MYL

◢ DRX402535: MYL

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

KRBA1
BSDC1
SUMO3
COL18A1
MTRNR2L1
GTPBP6
RABGAP1
PPIG
LUC7L2
FMC1-LUC7L2
FMC1
ST6GAL1
MBOAT4
IL36A
TMEM74B
C1orf158
TMEM191C
C1orf167
PRRT1B
SNIP1
DNALI1
SARS2
MRPS12
CCDC130
DNAJC14
SAE1
CEP164
UBE2L3
PRELID3B
GORASP2
SAMD4B
TATDN2
DEGS2
PLAU
GUCA1B
ZNF623
PRAME
ZFP30
ATP1A1
MROH7
GOLGA5
KCNJ15
IL21R
MAPK1
ANKRD54
EIF3L
ZFAND6
TRUB2
COQ4
SNRPE
BANP
BCR
ADAR
BAIAP2
FAM153B
RPL26L1
CLEC4M
RAB42
RAC1
NDUFS6
MRPL36
HDAC9
HLA-E
PAXBP1
UBE2F
ENG
RBM33
CLDN16
ZNF572
GPRC5C
RPS29
HK1
LOC388813
PARP15
POM121L2
STAU1
NUP214
NUP155
SYNJ2
ARHGAP39
KLHL20
YWHAQ
TMEM41A
PPIL2
WDR43
FOXN1
NME4
PIGW
MYO19
PAXX
CLIC3
CTAG1B
CTAG1A
LONRF2
DBNDD2
ZBTB6
POLR2E
GPX4
TMEM43
CHCHD4
CEP85
RPAP1
ZNF789
GCNT7
FAM209A
GRPEL2
NDUFS7
YTHDC2
GBA
OPN1SW
ZZEF1
CYB5D2
SMU1
YY1AP1
DAP3
TXNRD2
ITGB3BP
EFCAB7
MAP1LC3B2
ZNF761
TMBIM1
SERPIND1
ARTN
CYP17A1
ZNF32
KIR3DL3
KIR2DS5
KIR2DS3
SEPTIN5
GP1BB
CFAP36
ZNF316
KRTAP12-2
AUH
VHL
FAM13A
MIIP
CLK4
FABP6
ADCY10
MAPRE2
IGFALS
UTP3
SEC61A2
ALDH9A1
GPR3
HTR4
GNL3L
BRD7
FCGR1A
TMEM62
LOC102724265
ZCCHC24
AADACL4
FBLN2
ERVH48-1
YPEL3
TBX6
TMEM89
TOR1A
EPB41
REN
ZNF385A
NME1-NME2
NME1
RCCD1
DMAP1
SUB1
ST6GALNAC1
HAPLN2
ATG101
C5AR1
ZBTB40
RNF215
PRPF3
ZNF391
PKMYT1
EXTL2
TANGO2
SPAG4
IFT140
CRAMP1
GRM4
LPIN1
RAB11FIP1
CBX1
C9orf16
SNCG
MMRN2
CLPTM1
NDUFA6
NRCAM
MED15
TENT5B
WARS2
DUX4
PPP5D1
CALM3
SORD
GTF2H4
CRKL
GATAD1
TIMM17A
SPACA6
CASS4
PDE11A
RBBP5
FZD9
GSTM5
SELENOH
RPS14
ATP23
STX16
LZTR1
MRPL34
DDA1
SLC25A16
RFX2
CPA1
NBPF1
MTIF2
RIMBP3C
RIMBP3B
CLTCL1
PARP2
POLR2J3
RBBP9
RAB5C
TTC32
SLC1A7
ODF3L2
TAF10
LSS
DCLRE1B
AP4B1
CACNG1
JRKL
CCDC82
RERE
DNAJB12
TMEM44
ARFGEF2
MARCHF2
AMD1
N4BP2L2
CDK19
KRTAP10-9
HDGFL2
FEM1C
SSBP1
POLE4
GABPB2
RTL10
GNB1L
NDUFA2
IK
PSKH1
PGLYRP4
RUBCN
PYCR1
AURKAIP1
ZNF439
OR2W3
TRAPPC9
ZMPSTE24
ZNF317
ZNF438
RLN3
THEM4
ZNF562
CRYAA2
CRYAA
SMIM13
DDX27
MKNK1
BCL7B
SMG8
LEP
OR10H4
ZNRF4
ABHD3
ERMN
STRIT1
GAL3ST4
APOBEC3B
P2RX6
HERPUD2
LSR
AIFM3
AIG1
PTPRF
ZNF780B
ZNF487
RCC1L
GNB2
DGCR6L
CYB5R1
PRIM2
LRP6
NDUFB3
FAM126B
TRIM52
CHEK1
TMCC3
PDAP1
BUD31
TMEM275
MON2
GLO1
C8orf37
INTS1
SET
SMN2
SMN1
CNOT6
PPP6R3
IL15RA
KLRC1
FRG2C
FAM184A
NUF2
WDR74
PAK1IP1
C6orf52
RNGTT
TMEM72
LRG1
PPP6R1
DHTKD1
TYW1B
NBEAL2
CCDC12
BICD2
AFAP1L1
CCZ1B
UFSP2
C4orf47
PKD1
CYP27B1
METTL1
EEF1AKMT3
MAP11
TONSL
ZNF408
ARHGAP1
PPIH
PPM1F
STK11
COMT
RPL7A
MED22
SLC25A53
SURF2
SURF1
KRTAP10-6
CCNI
NDUFS3
KBTBD4
TM9SF4
FUT10
KCTD9
CDCA2
PIK3R3
FUT1
FGF21
TSPAN1
P3R3URF-PIK3R3
P3R3URF
ZNFX1
RPS19
NLRP2
TMEM242
UFD1
CDC45
INHA
OBSL1
SUPT7L
SLC4A1AP
NR2C2AP
FAAH
ARID3B
ATAD3A
MZF1
MAP1LC3C
POLG
CCDC116
PDE7A
MOB1B
CCSER2
HTRA2
DQX1
DHPS
PTGES3
MTOR
RSAD2
MED24
CCDC59
CCAR2
C8orf58
AGO1
ARPC2
IDUA
SLC6A19
HARS2
HARS1
GGPS1
ARID4B
POLR3B
CFLAR
CMIP
FAM86B1
TRAM2
ZNF138
CSTF3
BSG
SDF2L1
INO80C
HACL1
BTD
SPSB1
NUDT7
GCLM
TUT1
BIRC2
TRIM67
PCTP
AJUBA
DYNC2I2
ENDOV
PRRC1
PIH1D2
NKAPD1
MEMO1
DAXX
HERC1
ZBTB22
SLC38A1
TRIM63
HOOK2
TAPBP
PROCA1
RPS15
CALM2
KAT5
GOSR2
ANP32D
ACTL8
RBL1
SRCAP
LOC730183
COG7
DDX21
HDAC1
GNG8
FOXP4
POLR3F
DZANK1
WASF2
DRC7
TMEM120A
MGST3
TRMT11
DIDO1
GID8
YME1L1
GPX1
NIPA2
RPS8
SDHB
SECTM1
PANX3
TOP3B
MAD1L1
NR1H3
ACP2
RPN1
SOD1
NICN1
OR8B8
RPL27
MAGOH
DPH7
SMAP2
CBR1
UBE3B
RRP1
ARPC1A
ACOX3
TRMT44
ADI1
SLC27A4
PAAF1
COA4
NRBF2
SUN1
ZFP69
INTS7
DTL
HNRNPA0
SMYD5
HYDIN
KCNH2
DGCR8
CIBAR2
ST3GAL4
WFDC3
DNTTIP1
SGTB
NLN
ADRM1
CCNT1
MFF
PLIN3
ACTL10
EFCAB13
C20orf144
KHDC4
SLC25A1
TTC26
NARS1
SELENON
ST7
PSMB6
AGGF1
PTGS1
GPR84
NCAPG
KLF16
RNASET2
TNFRSF1B
RACK1
CSTF2T
TCTEX1D4
BTBD19
ZNF57
SLC6A9
FAM220A
WDR55
MRPL48
MRPL27
EME1
PIGQ
NHLRC4
CLBA1
ZNF101
ATP13A1
ZNF346
OR8G2P
TMEM42
QRICH1
HNRNPH1
PFDN5
MYG1
DHX40
EEF1AKMT1
WNT10A
H2BC11
H2AC11
H4C9
SLC34A1
RTTN
RPL5
TRIM5
UBOX5
FASTKD5
TRIM22
AGBL3
COQ3
CCDC120
NOS3
PAFAH2
LARP1
INTS2
PLXDC1
NOL8
CENPP
PHF19
NLGN3
NECAP2
AIFM1
BAG6
APOM
C19orf25
MED23
EIF3F
ZBTB45
ZNF670
SRI
SARAF
ZCCHC10
TP53BP1
TPK1
CDYL
TNFAIP8L1
PGAP2
AHCYL2
THAP7
RBM8A
TSACC
CCT3
DENR
SLC12A9
MBLAC1
EPHB4
SLC27A5
RBM28
UGCG
BIN2
SNRNP35
NDEL1
RAB40B
PLCD1
ZNF577
RNF187
ZSCAN25
TPR
ODR4
SMG7
CHCHD2
HOXC5
HOXC6
NHLH1
GTPBP3
ANO8
MACC1
ULBP1
ZNF280A
TRIP4
ATP5MC2
TIPARP
CDIPT
HMGN4
FAM168A
SLC22A1
FAM160B2
CORT
OR52N2
RMND1
ARMT1
TXN2
TBX1
RBIS
WASHC2C
DHDDS
PNPLA7
TTC4
ERCC1
VWA7
ZNF33A
IQSEC1
RIOK1
CAGE1
FOXK2
ADCY7
GDF11
AASDH
TMED2
WDR76
MFAP1
ANKRD27
ZNF627
COPS4
RBSN
PDE12
TMEM248
IREB2
PCYT1A
GAPVD1
PIAS3
DUS3L
EIF4ENIF1
MAP3K13
GSTA4
WDR36
ZNF165
PLK3
PPARGC1B
LAT
KSR1
PSMC4
KXD1
KAZN
SCAP
CNN2
TMEM259
GPN3
FAM216A
TENT2
ARNT
SCN9A
PPP1R12C
ZC3HC1
ZNF335
RGL2
ADARB1
ZNF74
NFKBIL1
ATP6V1G2
VARS1
PTK2B
TLE2
TRIM35
DDX39B
NDUFA10
OR6B2
ZDHHC7
GFI1B
TSC1
RPA2
UFC1
MID1
TOMM5
TOMM40
VILL
TARDBP
OGG1
USP21
TFPT
PRPF31
MATK
FAM234A
MRPL42
HSF5
UTP6
C22orf39
HDAC5
MFSD14C
PSPN
ALKBH7
CAMK2A
DCAF10
SELP
ELFN1
BTNL10
KEAP1
ASIC4
TMEM101
TMEM128
ELP1
ABITRAM
SYT3
DTX4
HES4
MRPL44
MRPL40
HIRA
CFAP298-TCP10L
CFAP298
PPP2R5B
STAT6
APRT
SIKE1
PYCR2
NUP210L
CRYM
COA7
ZNF436
PITHD1
CCDC137
NEK4
CYREN
STX1A
ADGRL1
USP45
TSTD3
KRTAP10-10
NUDT13
SLC25A6
ANXA2
NUDT9
ANTXR2
ARRB2
MARCHF8
USP16
ZCWPW1
MEPCE
RWDD2B
LOC730098
CCL27
ZNF561
RTN4
PRKAR1A
CLPB
CCDC124
ALDH3B1
USF1
DIS3L
TET1
STK40
C1orf74
RAD50
MTFR1
FCMR
GM2A
SYT12
LCN8
CADM2
AQP10
RMND5B
TRADD
FBXL8
TRIM16L
ATP8B2
FBXL13
ARMC10
IGF2BP3
ANKRD33
HSF4
CFB
HTR5A
HUS1
ACTR3C
MAN2A1
IRF2BP2
PPP1R8
MARCHF9
CDK4
ERMAP
ROM1
EML3
PEX14
DFFA
PITPNC1
OCEL1
PDZD8
SVBP
VPS39
TLCD2
PRMT3
COMMD1
CCT4
SAR1A
AKT2
NAF1
GPD1L
TTI2
MTBP
MRPL13
SUGCT
MPLKIP
MED18
SIRT4
KDM5C
MARCHF7
CAMK2G
MUC1
UPK3BL1
MTMR14
UBE2I
C17orf58
SPAAR
NOP16
HIGD2A
PSMA1
CGGBP1
C3orf38
NVL
LIN54
ARID5A
RIOK2
ZDHHC12
POM121
OR10A3
SIGLECL1
PDZK1IP1
TSFM
GPR137
SAMD1
ADPRHL1
TTC31
CCDC142
EIF3C
SLC39A8
EIF3CL
ZNF649
MADD
PATL1
GP6
MTF2
MEGF8
PRRC2B
SF3B5
DDX42
CCDC47
SKIV2L
NELFE
PEAK1
HMG20A
PACSIN1
SNX9
DNAJA3
MCTS1
SLC2A12
PRTN3
PPIP5K2
GIN1
SLC29A2
CCDC97
RIC8B
SLC13A3
TP53RK
TNFSF9
DCAF4L2
SCCPDH
DEK
HEXIM1
RSPH3
CENPN
NFX1
PDK1
FZR1
MELTF
BTN2A2
FAM133B
ASF1A
ATXN7L2
SECISBP2L
CSDE1
DYNC1I2
RALGDS
CSRNP1
LSM8
ZNF746
MAD2L1
PSMD4
BMPR1A
C10orf71
VTA1
NMBR
GFM1
WRN
ECE1
CITED2
OTUD3
PURG
MMUT
CENPQ
PRPF40A
ARL6IP6
CD300A
BAAT
SKP2
LMBRD2
SLC25A51
SPRING1
RNFT2
PHYH
FKBPL
ATF6B
CRCP
HTR3E
MVK
TLR2
SEM1
RAB18
AARS2
MGAT5
UCP3
ZBTB17
EXOG
ST3GAL2
PYCR3
NPRL3
RBMX
IL4I1
NUP62
ATF5
SF3A3
CLUL1
PFKM
SENP1
AQR
CAB39L
AUNIP
TMEM87A
GANC
VKORC1
ING5
MOB3A
IZUMO4
RAB11B
ZNF324B
LMAN2
LCK
EMC4
FAM167B
TOMM6
SGCA
CCS
CCDC87
NQO2
TTC30B
SLC35C2
RNPEP
STRIP2
CCDC28A
TOR4A
COL23A1
ZNF426
SLC24A1