ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX11220464 | HT-29
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX10976388: 293

◢ SRX10976389: 293

◢ SRX150671: 293

◢ SRX16676305: 293

◢ SRX16676306: 293

◢ SRX17826856: 293

◢ SRX17826857: 293

◢ SRX17826858: 293

◢ SRX17826859: 293

◢ SRX17826860: 293

◢ SRX17826861: 293

◢ SRX22117740: 293

◢ SRX22117741: 293

◢ SRX22117742: 293

◢ SRX22117743: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX1799522: CD4+ T cells

◢ SRX1799525: CD4+ T cells

◢ SRX1799528: CD4+ T cells

◢ SRX1799531: CD4+ T cells

◢ SRX671999: ES cells

◢ SRX672001: ES cells

◢ SRX672002: ES cells

◢ SRX9823127: GM12878

◢ SRX9823128: GM12878

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◣ SRX11220464: HT-29

◢ SRX11220465: HT-29

◢ SRX11220466: HT-29

◢ SRX9977682: HUVEC

◢ SRX1925740: iPSC derived neural cells

◢ DRX402530: K-562

◢ DRX402531: K-562

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX5457586: K-562

◢ SRX5457587: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX12813813: MCF-7

◢ SRX12813814: MCF-7

◢ SRX1497516: MCF-7

◢ SRX7030916: MCF-7

◢ SRX7030917: MCF-7

◢ SRX7030918: MCF-7

◢ SRX7030919: MCF-7

◢ DRX402534: MYL

◢ DRX402535: MYL

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

DBNDD2
PLEC
MMP7
GCNT3
SCARF1
RILP
CTAG1B
CTAG1A
DUSP6
EXTL2
PTHLH
SEC14L5
TTC13
SDR42E1
CEP72
MICALL2
CLDN16
EPHB3
THEM4
KCNJ15
SARS2
MRPS12
ST6GALNAC6
MIGA1
IST1
FKBP2
LOC114841035
VEGFB
SGCE
PEG10
SEM1
EPB41L4B
NDUFB3
FAM126B
KLF4
SLC45A4
IL18
TEX12
RAPGEFL1
DEGS2
NAA20
EPS8L1
RDH13
BCAR3
RFC1
PIK3R1
LGR5
KRBA1
BSDC1
BMT2
ZNF562
RERE
LAMA5
PDE11A
TMEM150B
SDCCAG8
CEP170
CBX1
SUSD1
KLK11
CUEDC1
ZNF341
ATP1A1
COMT
ACTN4
PER1
RNF187
RINL
GDPGP1
CIB1
INTS1
KLRD1
FAAH
GINS1
DMPK
SLC41A3
ALDH3A1
RXRA
FMN1
TLR2
PUM1
BAIAP2
KIAA1841
PRMT1
COL18A1
WWTR1
ZNF609
SFT2D3
SPAAR
HRCT1
OTUD7A
TOLLIP
LIPA
RHOV
LAT2
SRF
TNNI2
SYT8
MEX3C
ADD3
MBOAT4
ABCC3
WNT2B
C1QTNF9
TLNRD1
PRPSAP2
SAMD4B
ANXA2R
CLDN4
RAB30
VIL1
ANK3
RABGAP1
FAM83A
RBBP9
GAS2L1
ATP6V1B1
IFI44
GRPEL1
KRT8
TSPAN14
SH3BP2
YES1
TET3
PCNX3
MAP3K11
TBX10
LFNG
WDR74
CRP
FRG2C
GASK1A
TBC1D22A
GUK1
LCN2
GJC2
TMEM41A
NKAIN4
YKT6
SLC12A7
CLK4
ZNF761
IRF2BP2
PSRC1
IFT88
ZPBP2
IKZF3
RND3
DYNC1LI2
MAML1
NPFF
B3GALT6
SEC14L1
RPL13
LAMA3
P2RY4
HOXA3
ARR3
TWF2
MEIS2
SOCS5
SLC25A26
NRBP2
HERPUD2
PRKAR1B
SAMD12
SLC1A5
BCAS1
CCN5
ZHX1-C8orf76
ZHX1
PNPLA7
ST6GALNAC4
TSKU
ACYP2
PELATON
GPD1L
ERCC1
GOLIM4
SEMA4B
SP4
SMARCD2
COL23A1
SH3BGRL2
ABL1
YTHDC2
ZNF28
TMEM229B
QRICH1
PIP4P2
TMPRSS4
TOX2
GOLPH3L
SH2D6
WDFY2
USH1C
OTOG
NME4
DUSP22
RABGAP1L
OSBP
MYCBP2
UBE2F
MTMR6
TRIM29
CMPK2
GCGR
WDR43
PCP4L1
RAB1A
MARCHF9
CDK4
PIK3R3
TSPAN1
P3R3URF-PIK3R3
P3R3URF
OR5AK2
RAVER2
KCNF1
CDC42BPG
RAB6D
ITGA3
LCE3A
LCE3B
TARS1
THAP11
NUTF2
CENPT
VRK2
POF1B
MOCS1
PTGES
PPP5C
ZFP91
LPXN
TIGD2
MKNK1
BCL6
EHF
ARL6
BMF
MLLT6
KEAP1
HEBP1
HEXIM1
CORT
CREB3L1
RNF39
YPEL3
CBFA2T2
NBN
BHLHE40
IAH1
KRTAP10-8
INF2
DOCK6
PI4K2A
ORC4
MBD5
OSBPL3
TCEAL1
ANKRD22
ZBTB7C
NOS3
ZNF226
RAD51D
FNDC8
SNX17
EIF2B4
S100P
SEMA3G
TMEM44
LUC7L2
FMC1-LUC7L2
FMC1
HNRNPD
VEGFA
LRP5L
OR9A4
DGAT1
UBLCP1
TMTC2
CAMK2D
GDPD5
RARG
RHOG
ARHGEF39
NUAK2
RAB11FIP5
CA9
MMEL1
TUBD1
RPS6KB1
SLC5A1
LRRC24
SGMS1
RAB26
FRG2
ZNF44
STYK1
PPP2R3A
CCDC183
PAAF1
COA4
NIPA1
TTBK2
MYRF
FBXL12
POLE4
SERHL2
ZNF233
COX8C
DHRS3
DAB1
OMA1
VAC14
ST3GAL1
HIBADH
PDLIM7
ANGPTL4
LPIN1
ARHGEF2
ADPRHL1
FGFBP3
MUC4
ZNF292
C1orf210
BANP
RTKN2
CAPN5
CALD1
MAP3K14
SLC25A51
GPR39
CSF2
VWA7
RNF144A
NIBAN2
NBEAL2
CCDC12
PRELID3B
PMEPA1
PHF12
SERPINA1
OGFOD1
NUDT21
ARHGEF38
CEBPG
ZCRB1
PPHLN1
SERBP1
PPME1
C2CD3
TES
ARHGEF1
CAPG
PTGES2
ECI1
UEVLD
TCAP
PNMT
TMEM89
CCDC130
NR0B2
UBE2D3
MOB2
ATP13A4
RNF13
SETSIP
BTBD8
KIR3DL3
KIR2DS5
KIR2DS3
ACTR2
RNF103-CHMP3
RMND5A
ANXA2
MSMO1
ZNF112
NT5DC1
TFE3
SOD3
AQP5
IGFBP1
TMEM42
SH3BGRL3
BCR
ID1
GRB7
CEP250
GDF5
EPS8L3
TIMM23
TMEM229A
TEX52
ITGB3BP
EFCAB7
FAM13A
FARP2
ARHGAP23
LRP5
SERINC2
YARS2
SH2D3C
TTYH3
LTBP4
TSC22D4
NYAP1
LXN
SDCBP2
RPS7
KLHL30
SNRPB
NUDT19
SLC24A1
INTS14
P3H4
FKBP10
SLITRK5
MAP3K3
TRAPPC6A
BLOC1S3
FAM153B
METTL8
DCAF17
ZC3H10
RPL41
SCAF11
BIRC3
COLCA2
TMEM184A
FBXO46
MEIOSIN
GSDMD
EVPLL
PLA2G10
CAPN8
CHD1L
ADRM1
VAPB
ZBTB32
IL4
MUC5AC
TMEM216
SLC52A3
DGKZ
ZNF91
SPACA6
NPAS4
DCP1B
RHEX
GALNT12
HYAL1
HNRNPH1
YWHAB
MTIF3
METTL21C
FAM172A
GCA
MMP20
TMEM179B
METAP1
ZMYM2
TRIM3
KCNQ1
CD47
PARG
NCAPG
NBL1
USP48
HLA-DMA
RAB20
DIDO1
GID8
WNT9A
DUX4
RGL2
ANO10
PFDN5
MYG1
SSBP1
EPS8
SASS6
ZNF326
HIF3A
FBXL22
RNF10
KSR2
C11orf24
KIAA1522
HGD
LSR
ODC1
SPRR1A
ZNFX1
ADNP
SLC4A2
CDK5
STX16
ANTXR2
E4F1
RBFOX3
SPATA12
TIPARP
TCERG1
CPNE5
LRRD1
SPACA4
SSR3
TTC39A
PC
KLK6
PIGW
MYO19
MID1
EPB41L5
SLCO5A1
C2orf88
TMEM70
ELOC
ZNF337
CEACAM5
B4GALT2
COMMD4
CBX4
EHD4
PGAP2
RPH3AL
BCL3
AGBL2
C5AR1
TEX9
RFX7
CATSPERG
TEX44
HSD17B2
TTC32
PLEKHB1
OARD1
NFYA
SNX8
KIF11
AGPAT3
JADE1
MAEA
MRGPRF
SFTPD
ZNF670
NUDT7
ZNF587B
PRKCD
PPP6R1
NVL
RTN4
OGA
KYAT1
LRRC8A
GPRC5C
JMJD1C
REEP3
ZSCAN25
MATK
PCTP
WDR5B
NPAT
ATM
CMTM4
MPZL2
LNX1
ABCC10
ZNF805
PHF19
MACROD1
LAD1
ECE1
RBM17
MYC
TAS2R4
PYROXD2
BASP1
TTC4
SLC35A3
SAE1
CCNG2
HTT
CERK
SORL1
HIBCH
ADAMTS7
EXOC1
RGS3
OTUB2
PPP1R9A
PCF11
RPS19
CMTR2
NUMB
ATAD2
TPM3
EVPL
SLC25A28
SPIDR
ZBTB25
ZBTB1
PKM
IL16
F5
ARHGDIB
SLC5A11
AKR1B10
STAU1
TTLL5
ERG28
DHDH
CASZ1
LAMB3
VWA1
LDB3
ACTL8
KDM3A
CDYL
USP53
KHNYN
CBLN3
MCF2L
KLHL21
FAM227B
DTWD1
CATIP
ING2
NNT
SERPINI1
PDCD10
ZFAND1
DNAJB13
CLUH
MED23
LNPEP
MAGOH
PSENEN
LIN37
WDR86
MTF2
RAC2
SGK2
CYRIB
C19orf12
C11orf80
UPF3A
LRRC75B
EXOSC8
ALG5
RBFOX2
SLC9A3
TAS2R14
SLC1A7
GRPEL2
PER2
MTURN
ATP2B3
RBM7
C11orf71
KRIT1
ANKIB1
PLD1
LGALS4
FEM1C
GSTA4
GMPS
MTREX
DHX29
PRKD2
ETHE1
PCDH7
SHOC2
BBIP1
RAD21
EMP1
CYP3A43
CRLF1
LRRC66
TMEM59L
C3orf14
TRMT5
SLC38A6
TMBIM6
MTHFD2L
DHRS7
RMDN1
SYS1
FAM83B
JAG2
SLC4A10
DDX27
TATDN1
NDUFB9
LOXL4
OSGEPL1
SPON1
ZNF385A
DGKD
HOOK1
ZNF317
CCDC150
NEK4
ACVR1
COX19
TAF1A
BCAR1
ADAM8
TBCEL-TECTA
TBCEL
ZNF628
TTC9B
IL1RN
ZNF117
ZNF641
KBTBD2
NUCB2
VRTN
PLIN1
HPCAL1
MFNG
TRAM2
HSD17B12
S100A10
FAM110A
VOPP1
LOC112267881
KIR2DL1
F2
PHF2
DENND3
PRRC1
TMEM60
PHTF2
DGKA
PYM1
ZNF17
ROPN1
STUM
HOXC5
STPG1
NIPAL3
NAP1L1
GLIS3
PRR15L
TMBIM1
MRPL45
CSAD
ZNF740
ETFBKMT
NME3
MRPS34
EME2
VIRMA
FAM50A
ZNF280D
SEC23B
KCNJ9
RUFY1
SERTAD2
MACC1
PIGF
CRIPT
TFB2M
CNST
ERAP1
LAMC2
S1PR4
ATP6V0A4
CAPN13
TNFAIP8
HEXIM2
BAIAP3
PHLDB2
IKBKE
GAL3ST1
PRRT1B
CEP41
LRRC20
RNF145
C16orf91
PELI1
PRDM8
COL14A1
HMGA1
ROPN1B
F2RL1
KRTAP9-8
HMGB1
USPL1
ROM1
EML3
CTRL
PPP1R37
TMEM129
TACC3
NOTCH2NLC
CDC73
CCDC71L
RASGEF1B
IGSF3
PAIP2B
MET
GPER1
DOCK1
CYP3A5
INTS5
DCTN4
CPT1A
RPL7A
MED22
SURF2
SURF1
SLC25A13
HOXB3
HOXB5
ZNF552
COMMD2
TPR
ODR4
ABLIM1
SLC37A2
FBXO32
PTK6
TMSB10
ITGB4
PLEKHA3
FKBP7
MARK2
ISG20
CDCA7L
LRATD2
NCK1
PNRC2
PYROXD1
CNPY3
NKPD1
MBNL2
SH3BP4
ENG
RPS14
PPP2R5B
RNF220
KIF21B
GULP1
BRD2
ATP8A2
TRIM5
TRIM22
CAMK2G
CAPNS1
FERMT1
SESN3
PRSS38
SYT3
FADD
AVPR1B
ZNF765-ZNF761
ZNF765
DEF6
NABP1
PDCD11
ATP5MD
TBX3
RNF223
FAM234A
ABCD3
E2F6
ADCK2
LEXM
TTC22
CLCN5
DDX11
P2RY1
IDH1
PDIA2
CBLB
C1orf56
OLFML2B
PEX10
RGS11
ARHGDIG
RBBP8NL
ZNF577
MANF
GSTK1
CCDC166
GRB10
TXNRD2
SYN3
CFLAR
ZNF140
NFKBIA
DERL1
SRC
ZNF527
RBIS
GTPBP6
PFKM
SENP1
ADAM22
RAP2B
PCDH1
SQLE
PGAP6
DNAJC25-GNG10
DNAJC25
SESN1
CEP57L1
NR1H2
ZNF610
DACH1
ZNF652
EDN1
PDE5A
STYXL1
SAMHD1
RGL3
SNX31
IKBKG
SF3A3
ZNF605
S100A9
FAM83D
SLC39A4
CPSF1
ZBTB38
SLC7A6
IGF2BP3
CCND1
MALL
ARID1A
GTF3C5
UBR2
ACSL1
CBX2
STRA6
MAL2
NMRAL1
HMOX2
PDE4DIP
ERVW-1
AFF1
GAREM1
CDC7
FNBP4
BCL9L
CYB5R3
NUF2
SLC29A2
MRPL34
IMPA2
ABHD8
CCR7
FAM187A
LYPLA2
DDA1
MPHOSPH6
CSTF2
KDM2A
SCARB1
G3BP2
TCAF1
LDAH
DHRS9
DDX19B
GJC3
AARS1
UTP3
MTBP
MRPL13
POLDIP3
WDR62
THAP8
MYEOV
NDRG1
GDF11
TPSB2
TPSG1
SNRPB2
SIVA1
KIAA1586
SPINT2
MYORG
FBXO17
ADGRA3
RND1
MARK4
EXOC3L2
NSUN4
GMDS
CASP7
GZF1
H4C2
H4C1
SLC16A3
SNTB1
TARM1