ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5457587 | K-562
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX10976388: 293

◢ SRX10976389: 293

◢ SRX150671: 293

◢ SRX16676305: 293

◢ SRX16676306: 293

◢ SRX17826856: 293

◢ SRX17826857: 293

◢ SRX17826858: 293

◢ SRX17826859: 293

◢ SRX17826860: 293

◢ SRX17826861: 293

◢ SRX22117740: 293

◢ SRX22117741: 293

◢ SRX22117742: 293

◢ SRX22117743: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX1799522: CD4+ T cells

◢ SRX1799525: CD4+ T cells

◢ SRX1799528: CD4+ T cells

◢ SRX1799531: CD4+ T cells

◢ SRX671999: ES cells

◢ SRX672001: ES cells

◢ SRX672002: ES cells

◢ SRX9823127: GM12878

◢ SRX9823128: GM12878

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX11220464: HT-29

◢ SRX11220465: HT-29

◢ SRX11220466: HT-29

◢ SRX9977682: HUVEC

◢ SRX1925740: iPSC derived neural cells

◢ DRX402530: K-562

◢ DRX402531: K-562

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX5457586: K-562

◣ SRX5457587: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX12813813: MCF-7

◢ SRX12813814: MCF-7

◢ SRX1497516: MCF-7

◢ SRX7030916: MCF-7

◢ SRX7030917: MCF-7

◢ SRX7030918: MCF-7

◢ SRX7030919: MCF-7

◢ DRX402534: MYL

◢ DRX402535: MYL

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

KRBA1
MTRNR2L1
SUMO3
BSDC1
PPIG
RABGAP1
MBOAT4
TATDN2
COL18A1
BCR
IL36A
UBE2F
PRAME
SARS2
MRPS12
AADACL4
LUC7L2
FMC1-LUC7L2
FMC1
RBM33
ZNF572
SAMD4B
ATP1A1
PRRT1B
YTHDC2
FRG2C
MROH7
GTPBP6
GUCA1B
TMEM41A
KCNJ15
TMEM89
SAE1
YPEL3
C1orf167
CCDC130
FOXN1
CBX1
PPIL2
ZNF562
TMEM43
CHCHD4
ST6GAL1
POM121L2
PRELID3B
SNIP1
DNALI1
LZTR1
RBBP5
AURKAIP1
ZFP30
SERPIND1
ZNF623
ENG
NUP214
TXNRD2
ITGB3BP
EFCAB7
TRUB2
COQ4
GCNT7
FAM209A
TOP3B
DEGS2
YY1AP1
DAP3
GFI1B
TSC1
FAAH
GTF2H4
HTRA2
DQX1
POLR2E
GPX4
MRPL40
HIRA
NDUFS7
ZNF317
CRKL
RANBP1
TRMT2A
RBL1
JMJD1C
REEP3
FAM234A
MAPK1
CLK4
GPRC5C
CEP85
POLR2J3
MARCHF2
SLC35E2A
TTC32
AMD1
CDK19
STAU1
RCCD1
ANKRD54
EIF3L
ZNF761
LONRF2
PCBP2
SLC1A7
MED23
SEPTIN5
GP1BB
ZNF408
ARHGAP1
DUX4
ARHGAP39
FAM153B
FEM1C
PIH1D2
NKAPD1
TMEM42
UBE2L3
TXN2
GORASP2
RPL26L1
PHF19
TRIM52
TNPO3
AGPAT1
SMIM13
FAM184A
APOBEC3B
LOC102724265
ADCY10
UFD1
CDC45
COPS4
ZNF324B
SSBP1
CNN2
TMEM259
PPM1F
TRANK1
SF3A3
ZSCAN25
ADAR
SFSWAP
CCDC116
WASHC2C
KAT5
SEC22B
STX16
C9orf16
SNCG
MMRN2
RNF187
C2orf88
EIF1AD
BANF1
FZD1
RPS29
PAFAH2
DNAJB12
RIMBP3C
RIMBP3B
MACROD1
MAPRE2
SUPT7L
SLC4A1AP
TTI2
PPP5D1
CALM3
TANGO2
GCFC2
NDUFS6
MRPL36
NME1-NME2
NME1
THAP7
MAN2C1
SNRPE
ZNF438
GNB2
MRPL42
ZMPSTE24
ALDH3B1
NOS3
TMEM44
PCP4L1
GRPEL2
ASCC2
IGFALS
RNF215
SUPV3L1
TFPT
PRPF31
EIF2D
ARTN
PACSIN1
BAG6
APOM
IL21R
BCL7B
PTPA
CRAT
IFT88
SPSB1
TMEM191C
SLC24A1
INTS14
SUB1
GABPB2
HIP1
WDR47
DDX31
GTF3C4
TRIM63
CCNI
SPATA45
KRTAP10-6
TMEM242
SELENOH
CSAD
ZNF740
CENPN
SAMD1
PGBD2
TRMT11
PRPF3
ZFAND6
RSAD2
C1orf158
PLD3
C19orf47
SLC7A6
VAPB
SH3GL1
CHAF1A
RGL2
PAXX
CLIC3
ZC3HC1
ZW10
POLE4
KCTD9
CDCA2
YWHAQ
DSTYK
IQSEC1
PKMYT1
SLC4A1
HLA-E
YPEL1
CTAG1B
CTAG1A
POLG
TPR
ODR4
AHCYL2
MED15
RERE
LARP1
ZNF165
CRBN
SYNJ2
FRG2
PRIM2
FAM25E
SLC27A4
ZCCHC7
ACTL8
NBPF1
ACYP2
PDE2A
HSPBP1
BRSK1
RSRP1
ST3GAL4
APOA1
ANKRD36C
CMIP
SYT3
ZFYVE28
NME4
UTP3
AARS2
RPS15
GPR3
ZNF74
SMU1
CDIPT
TMEM62
ZNF554
CACNG1
COMT
ZNF529
TSNAX
C7orf25
IDUA
TMEM191B
NUF2
REXO4
ADAMTS13
PPP6R1
PLK3
EIF1B
APRT
UBAP2L
C1orf43
NFYC
DNAJC14
EXTL2
RPS7
ZNFX1
VTA1
NMBR
HUS1
PPARGC1B
UCP3
FGFRL1
MMGT1
RPS26
NUP205
TOR1A
OGDH
GSTA4
TMEM216
ATG9B
ABCB8
TUBAL3
TMEM74B
LMNB2
GAGE2C
GAGE2B
GAGE2A
ZNF436
SEC24C
MAGOH
MAP1LC3B2
PARK7
P2RX6
FAM220A
ZNF280A
N4BP2L2
LMAN2
MED24
IL15RA
FAM160B2
EPO
SDF2L1
CCDC88A
QRICH1
NDUFA6
CNTRL
C5
IREB2
SPRING1
RNFT2
CYP17A1
WDR43
SLC25A24
NRCAM
FAM207A
ATAD2
LTN1
KCNH1
CEP164
PLAU
ZSCAN21
PAXBP1
BAIAP2
KRTAP10-9
RABIF
RNF216
SYS1
KIR3DL3
KIR2DS5
KIR2DS3
FRG1
GOSR2
MST1
ZNF282
TMEM219
RBBP9
KDM3A
CCDC59
RBM28
CYB561D1
RIF1
HNRNPH1
PRKCSH
CCDC151
NBEAL2
CCDC12
GLI1
TLR2
SERPINB1
SUGCT
MPLKIP
DYNC2I1
PPP6R3
ZNF808
CWC22
TMEM229B
INO80C
WBP1
INO80B
PDCD6IP
ZNF3
DHX8
VAC14
VMAC
NDUFA11
PLEKHA6
SMARCD2
GDPD5
ZBTB6
OR2W3
GBA
KLHL20
NECAP2
DNAJB13
TMEM128
DHX40
BANP
DCAF10
SLC44A1
MTR
TNFRSF1B
ZNF585A
THOC3
DISP3
ACOX3
TRMT44
BMS1
DPH7
SNAP29
PI4KA
MAP2K1
SRP19
NR2C2AP
IPO4
SMG8
WWOX
PFDN5
MYG1
SAYSD1
PLIN3
ERMN
TCAIM
RPL37
TMEM222
ZNF385A
MRPS15
RPS18
MARCHF7
VPS52
TCTEX1D4
BTBD19
CNPY3
LOC388813
CEP192
DGCR8
HTR3E
HIC2
TMEM101
DHX16
IBA57
UFSP2
C4orf47
PRKCI
NEU1
PSMC3
TUBB1
MRPS18C
HELQ
TPM1
LRP6
NPIPB9
ZNF268
TMCC3
VARS1
LYRM2
CHMP4B
MATK
TTC38
PKDREJ
AASDH
ZNF212
RNF146
DBF4B
CAMK2G
PKD1
DGCR6L
DTX4
GIMAP8
HERPUD2
VPS13B
GRM4
TRIM5
TRIM22
ODF3L2
KIF15
KIAA1143
POC1B-GALNT4
GALNT4
PHF12
AGBL3
KLHL18
KIF9
DYNC2I2
KRTCAP3
DMAP1
RBIS
PPP1R8
EEF2K
LEMD2
SLC6A9
SPATC1L
FAM20B
PLEKHG2
H6PD
FNDC3A
THEM4
NUP210L
RAB3GAP2
GTF2H5
NDUFAF1
DCLRE1B
AP4B1
ZNF398
ZNF425
TMBIM1
IPO13
PPOX
RBM48
PEX1
SEC61A2
SPACA9
AK8
ADAM8
TSC2
NTHL1
AXDND1
ZNF714
CRTC1
YJU2
CASS4
PRPSAP1
PDRG1
DDX27
HTR4
N6AMT1
CACTIN
RRP9
PARP3
AK2
TP53I3
ZNF649
IRAK2
CDK5RAP1
ZNF391
NDUFS3
KBTBD4
C12orf73
VWA7
TFEB
ZDHHC12
ARVCF
ZNF561
ZSCAN22
BRPF1
TSSC4
TBCB
DTWD2
POLR2I
OVOL3
SLC45A3
MRPS33
C19orf48
NOL8
CENPP
PDE11A
RBM45
WDR70
PDE4A
CCDC124
TIMM50
IL18BP
CHMP4C
STX4
CCNL2
STRIP2
MITD1
ADPRS
TEKT2
HMGN4
PDCL3
EPB41
LRRC59
SH2B1
LEO1
ZNF558
EIF3F
NSUN4
TARBP2
MAP3K12
PMS2
AIMP2
CGB2
CGB1
TRIP4
DPY19L4
POLR3B
SNAP47
JMJD4
TMEM79
SMG5
INTS4
CCDC83
MEGF8
HDAC1
ARNT
RPL27
MMACHC
CCDC163
SACM1L
FUT10
PMF1-BGLAP
PMF1
WNT10A
TNXB
OR8G2P
MRPL44
ZBTB40
TIPARP
KRR1
TAS1R1
NOL9
ZRANB2
BLOC1S5
UPK3BL1
TAF1C
ADAD2
SNX15
DLD
SKP2
LMBRD2
GLO1
SLC25A16
MCOLN1
COMMD4
DGAT1
TENT2
BBS1
DDX50
RTL10
GNB1L
WDR4
ANP32D
ZNF426
SMG7
PPIH
RBSN
PRMT3
SPIDR
B3GALNT2
RAP1GAP
WNT11
COL23A1
NBN
MED18
DIDO1
GID8
NRBF2
BUB1B
ZNF684
FAM13A
STAM2
PTPRF
HK1
ANKS6
SPPL3
TMEM107
VPS33A
ASB6
TNNI3
RNF121
LOC100133315
SWI5
GOLGA2
CSTF2T
CCDC88B
ZNF180
TTC39A
RPAP1
RPS10-NUDT3
RPS10
ZNF566
CCAR2
C8orf58
TMED1
SCGB1C2
PSMB7
STAT6
RPA2
ZNF221
UBQLN4
LAMTOR2
MAP2K7
CCS
CCDC87
RFX1
RRP15
ERMAP
ZNF805
S100A13
GNL3L
TRADD
FBXL8
CHTOP
HSF4
RNPS1
GSTM5
R3HCC1
CBWD5
ZNF846
C2CD5
CBWD3
TCAF2
POLR2J2
ZNF26
TM2D1
NUP133
OPN1SW
FAM187A
EFTUD2
CCDC103
PDAP1
BUD31
H2BU1
H2AW
METTL6
EAF1
TTC31
CCDC142
MRNIP
SEC11A
E2F6
MEF2A
NTPCR
SCAP
MAP11
WDR13
AFAP1L1
CASC3
TTC21B
PCTP
ZKSCAN8
RIPK1
PGLYRP4
MADCAM1
ETFB
ADRM1
TIGD1
EIF4E2
TM9SF4
MTLN
RPF1
CFAP36
UQCRQ
GDF9
PPP2R3B
OSBPL7
TMCC2
HKDC1
SECTM1
LTA4H
MGAT5
MEIG1
CSRNP2
C19orf53
GNA12
ZNF487
SPOCD1
SLC25A1
ATP5MC2
SEC13
AGK
ZNF510
RSPH3
DAXX
NFKBIL1
ATP6V1G2
HNRNPF
CDK7
DDX39B
ZBTB45
SCAND1
DPP9
CCNC
INKA2
DDX20
FAM168A
BTNL10
MICOS13
HSD11B1L
ZNF565
ZNF146
BCAS2
MON2
PEX3
ADAT2
SEM1
CPPED1
SLC35B1
DHTKD1
SRFBP1
PTCD1
CPSF4
CHFR
SIRT5
GAGE7
GAGE6
GAGE5
GAGE4
GAGE12I
GAGE12B
MTF2
DCP1A
RPS14
WDR55
RNASET2
SLC39A13
MTOR
ZNF439
SMIM12
COG2
TCTE3
ERMARD
ZNF57
SSNA1
ANAPC2
FN3K
PNO1
PXMP4
GTF2H2
GTF2H2C
TOR1AIP2
TOR1AIP1
ILF2
ATR
CDK12
ANKRD36
GFM1
THUMPD3
WDR62
THAP8
ZNF442
MED16
CPT2
TIMM13
CIBAR2
THEM6
RAN
TBC1D19
SLC29A2
BRF2
ZNF383
CCDC174
SREK1IP1
CWC27
METTL26
PSMA1
BORCS6
FZR1
HIKESHI
KXD1
AKR1A1
GPX3
PPIP5K2
GIN1
SIRT4
EMILIN1
ZZEF1
CYB5D2
SIKE1
IFI6
RABGEF1
ZNF576
IRGQ
POM121
ADO
RAB8A
FAM228B
SF3B6
ZNF546
NIP7
COG8
GYPC
RRP1B
HSF2BP
SNRNP35
NAPA
ATP5MF-PTCD1
ATP5MF
SAR1A
HACE1
NANOS3
SGO1
GORAB
GRIPAP1
SLC35A3
PLEKHM3
ABCC10
CYREN
ACVR1
DHDDS
ITGA7
ABCF3
MMUT
CENPQ
NQO2
ZNF19
TENT5B
IL18R1
RDH5
BLOC1S1
GEMIN6
IGLL5
PRSS38
NR1H3
ACP2
LPIN1
TMEM167B
POLR3A
RPS24
DR1
DFFB
CEP104
ITSN1
CRYZL1
TIMELESS
MRPL16
ATG101
ATG4C
MACC1
CHCHD2
NUDT5
CDC123
CALCOCO1
YIF1B
KCNK6
UNKL
PSPN
ALKBH7
HDGFL2
INTS12
GSTCD
TTC4
TNFAIP8L1
CDK11A
CAMLG
RPL10A
DGKH
HAUS5
CYB5B
TRMT10A
MTTP
SMIM30
SRP9
ABCA3
CLPB
KSR1
EEF1AKNMT
NUFIP2
GPATCH3
ZNF300
ELAPOR2
BCAS4
XKR9
LACTB2
WFDC3
DNTTIP1
GTF2H2C_2
POLR1H
CIZ1
UBE2Q1
MUC1
PDSS2
MRPL27
EME1
ZNF197
EXOSC9
STRIP1
USP47
RPL36
BCL2L1
DNM1
DNAJC28
SPATA24
YBEY
MCM3AP
MRPL38
DNAJC16
CASP9