ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX10144543 | Kasumi-1
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◢ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◢ SRX535453: A-375

◢ SRX535454: A-375

◢ SRX5501657: A-375

◢ SRX5501659: A-375

◢ SRX5501661: A-375

◢ SRX10131662: Bronchial tracheal epithelial cells

◢ SRX10131663: Bronchial tracheal epithelial cells

◢ SRX20436771: DLD-1

◢ SRX20436779: DLD-1

◢ SRX22001291: DLD-1

◢ SRX22001292: DLD-1

◢ SRX22001293: DLD-1

◢ SRX10715331: HCB1

◢ SRX10715344: HCB1

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◢ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX20230567: Ishikawa

◢ SRX20230568: Ishikawa

◢ SRX20230569: Ishikawa

◢ SRX20230570: Ishikawa

◢ SRX20230571: Ishikawa

◢ SRX20230572: Ishikawa

◢ SRX20230573: Ishikawa

◢ SRX20230574: Ishikawa

◢ SRX10144542: Kasumi-1

◣ SRX10144543: Kasumi-1

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX7366779: MCF-7

◢ SRX7366780: MCF-7

◢ SRX7366781: MCF-7

◢ SRX7366782: MCF-7

◢ SRX7366783: MCF-7

◢ SRX7366784: MCF-7

◢ SRX244177: MM.1S

◢ SRX244180: MM.1S

◢ SRX327758: MM.1S

◢ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◢ SRX1637467: MOLT-4

◢ SRX1637469: MOLT-4

◢ SRX1637470: MOLT-4

◢ SRX24723215: MRC-5

◢ SRX24723217: MRC-5

◢ SRX24723219: MRC-5

◢ SRX24723221: MRC-5

◢ SRX2375362: MV-4-11

◢ SRX2375366: MV-4-11

◢ SRX14127531: OCI-AML3

◢ SRX14127532: OCI-AML3

◢ SRX14127543: OCI-AML3

◢ SRX14127544: OCI-AML3

◢ SRX18455086: OCI-AML3

◢ SRX18455087: OCI-AML3

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◢ SRX4023329: T-47D

◢ SRX4023330: T-47D

◢ SRX728779: THP-1

◢ SRX728780: THP-1

◢ SRX9730732: THP-1

◢ SRX9730733: THP-1

◢ SRX9730734: THP-1

◢ SRX9730735: THP-1

◢ CDK9: STRING

WDR74
LGR6
GSDMD
CPXM1
NME1
MEF2C
TBKBP1
TMC8
BMS1
ZNF595
ZNF718
TOR1AIP1
TACO1
NUF2
ARHGAP25
DPY19L4
CYB561
NKX6-3
CACNG4
MRPS18C
HELQ
VAV1
CCDC149
NIBAN3
MTRNR2L8
ACY3
NDUFS3
KBTBD4
NFE2L2
GTF3C3
B4GALT7
ADA2
WDR11
NBEAL2
RNF220
STX16
FRA10AC1
TEFM
SMG8
SKIV2L
NELFE
ZNF221
NDUFS7
TRIM41
SLC39A3
CNPY3
PSD4
MAF1
RPS6KA1
SIPA1
EXOSC4
ACBD5
RMDN1
SLC24A1
MYO1G
DCAF10
RASAL3
CLEC11A
POTEJ
SH3BP2
ZNF391
POTEH
SSBP1
ARPC3
GFM2
TOP3B
UNC13D
C17orf75
ZDHHC6
VTI1A
NEK6
ABT1
PRRG2
NOSIP
SHANK3
ANKRD40
WNT10B
RASGRF2
S100A9
KLHL20
GRPEL2
GTF2H2
ZNF408
ARHGAP1
ARL6IP4
GTF2H3
EIF2B1
H4C14
GOLGA3
MRPL30
MITD1
GSN
TRIP4
CCAR2
THUMPD3
TCTEX1D4
BTBD19
WDR36
SIRT4
IL16
CCDC77
KDM5A
CA12
MTMR9
RXRA
CRH
CD33
HEMK1
NR1H2
ARAP3
ITGA4
KBTBD2
ELMO1
TXLNB
IPO4
CCM2
HHEX
ING4
NOXA1
FOXI1
TSPOAP1
PPIP5K2
LST1
EDC4
ADAM10
NEDD9
ARHGDIB
MPO
SNRPB
DUS1L
RNASE2
NUP54
SLC44A1
TUT1
LSG1
ZNF276
IL17RE
IFIT3
CDK5RAP1
UTP3
EIF1AD
BANF1
PPP1R35
P2RX1
SYN2
TATDN3
NSL1
DMAP1
UBXN8
RGS14
ZBTB45
ZNF565
AURKAIP1
FAM207A
TARS2
MMRN1
CLTC
PSMF1
PHB2
PEX12
RMND1
ARMT1
ZNF165
SNUPN
STXBP5
LAMP1
MTRNR2L2
ANAPC5
PTGR1
MRPL40
HIRA
ANKRD13D
MNAT1
GNG2
FGF7
SDE2
ARSG
SLC16A6
LILRA2
DCP1A
C10orf88
WDR55
PIGV
CSNK1G2
AKNA
SIRPB2
STAP1
GTF2H2C_2
GTF2H2C
FBXW7
ARAP1
HPCAL1
INTS12
GSTCD
SLC16A3
PLEKHO1
FCER1G
TUBGCP3
TMA16
PROSER1
NHLRC3
SEC14L5
CD300A
ALG10
ARHGAP30
CNPY1
CSF3R
NFKB2
ANPEP
MAP1LC3B2
CFAP410
RGL2
IFTAP
ALG10B
C12orf57
PPP1R15B
MRPL1
SLC26A11
CPSF1
PRLH
CALR
CYREN
FERMT3
SIGLEC15
SH3TC1
ETV6
TSPAN10
NPLOC4
TRAF3IP3
ZNF384
BBS1
PDLIM2
C3orf86
CAMP
SELENBP1
GALK2
COPS2
NFKBIL1
ATP6V1G2
TMEM154
TNFSF8
COX16
CRACR2A
AIF1
GIMAP1-GIMAP5
GIMAP1
RUVBL1
ITGB3BP
EFCAB7
TRIB1
SELENOH
TSFM
TSSC4
RPS7
DUSP6
OSM
ARHGEF18
PPIL3
NIF3L1
OPRL1
RGS19
RAC2
IPPK
MYL12A
RPL29
AGK
PPP1R16B
NPEPL1
MRPL21
IGHMBP2
MRPS16
SEPTIN9
NDUFC2-KCTD14
NDUFC2
DR1
TM7SF3
NFKBID
HCST
BPI
TNFAIP8L2-SCNM1
TNFAIP8L2
NR1H3
ACP2
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
DDX23
MTF2
IFRD2
HEXIM2
KMT5B
CCNL1
CTNNB1
ZC3H6
FEM1A
TBL3
DSTYK
COPS7B
EIF2D
CALR3
C19orf44
CDCA3
TMEM41A
STX18
TIMM21
FBXO15
BRWD1
UBC
NCBP2AS2
NCBP2
ABCF2-H2BE1
ABCF2
ATAD2
NOTCH2
PPP5D1
CALM3
TSNAXIP1
RANBP10
PPRC1
UNK
PAFAH2
GSPT1
POLR2J3
TMEM11
SOD2
WTAP
TMEM199
POLDIP2
WDR53
FBXO45
TMEM222
SPATC1L
CALM1
GATB
FOXJ3
CLPB
OPA1
SSNA1
ANAPC2
RBL1
CCDC88A
TSN
TOMM22
SPNS1
CALM2
SEC13
MRM3
LRP6
GLOD4
CYCS
ZSCAN22
MRTO4
EMC1
ORMDL3
TCF3
RPL8
COPS8
KBTBD7
NMNAT1
LZIC
TIMM22
UBB
NUP214
SMN2
SMN1
BTRC
CNOT1
PEMT
TMEM115
KMT2D
MED23
DOHH
C16orf91
POMZP3
ZNF337
KPNB1
SCAF1
SYMPK
CHMP4B
ST3GAL2
CTDP1
RPS3
MTERF4
BOD1
AP2S1
IST1
WASHC2C
GSTA4
PSMD3
PEX3
ADAT2
PRCC
FOXA3
CDKL3
RPS20
AHCYL2
PNKD
SNX17
EIF2B4
AAMP
ING3
TSC1
GFI1B
HTRA2
PA2G4
HMGB1
ADPGK
PHIP
TCEA2
CKS2
HEXA
ZNF212
WASHC2A
SMPD3
PEX26
CLEC16A
NAGPA
THRAP3
KCTD9
CDCA2
MRPL24
DDIT4
KBTBD6
RPL22
UBE2B
USP30
ZFAND2A
NUDCD1
TTC13
ARV1
TRIAP1
ZCCHC4
UBE2D3
PPP1R12B
ZKSCAN2
ZNF721
PIGG
NXF1
MED15
PKM
ATP5MF-PTCD1
ATP5MF
MCM7
AP4M1
RPS6KB2
RPL18A
RPS28
NDUFA7
ATG14
OSCAR
NDUFA3
TOB2
USPL1
SLC9A1
CRTC2
H2BC21
H2AC20
SCNM1
LYSMD1
INVS
ERP44
IPO11
TMEM127
CIAO1
OAZ3
KCTD5
MAD2L1BP
MICOS13
HSD11B1L
H2AC21
SCRIB
C8orf33
RPIA
PANK4
CDC25C
ZNF444
GTPBP2
NPRL2
CYB561D2
WDPCP
NOP14
MDH1
GRK4
GPAM
MAIP1
PPP1R12C
DNAJC11
RPS26
EIF4A2
DIP2A
DUS2
DDX28
FAM53C
TMTC3
CEP290
TRAPPC3
ZW10
CYP51A1
TNFAIP1
IFT20
PHB
BRIX1
SLC35B4
MAPKAPK5
RANGAP1
ATXN2L
UBR2
ALKBH3
C1orf159
MXD4
SRSF11
SMG5
RBM42
FUS
UBQLN1
LRRC29
MRPS15
TBRG4
NUP153
CUL4A
ZNF56
RLF
PGBD4
EMC7
KAT7
COMMD1
PINX1
MFN2
HMBOX1
BOD1L1
C19orf53
PSMD11
FBXW11
MRPS35
CCT4
KDM4B
DNAJA3
UBE2Q1
SLC25A19
DCAKD
ADNP
UBQLN4
LAMTOR2
NSFL1C
TAF5
HMGCL
GHITM
BANP
EEF1AKMT4-ECE2
EEF1AKMT4
ALG3
ZFYVE1
TRIP12
FBXO36
PBLD
HNRNPH3
GID4
ATPAF2
CCDC146
PCID2
SPRYD4
LRRC40
STK25
INTS9
DPP9
MMACHC
VPS37A
CNOT7
RIC8B
LUC7L
AP2M1
NOC4L
DDX51
NMT1
TTC33
DOLPP1
ENDOV
CIC
SPTLC1
SP2
MRPL20
SLC33A1
ARHGEF12
ZNF420
ZGPAT
ARFRP1
PIGU
ZFYVE19
DNAJC17
AHCTF1
HNRNPAB
ACOX3
NTAN1
COMMD9
UCHL5
RO60
TEPSIN
NDUFAF8
TCF12
MRPL58
CSRNP2
EIF3F
RCL1
IDH3B
LETM1
RBM6
MTMR2
BIRC5
DNAJB12
STAU1
ABRAXAS2
SECISBP2
LONP1
CATSPERD
TFPT
PRPF31
ARF4
RALBP1
TRMT44
SUPV3L1
SNAPC3
SMARCAL1
GTF3C5
HSP90AB1
GFUS
DDX1
H1-4
COQ9
CIAPIN1
SART1
RPL12
LRSAM1
ZFPL1
CDCA5
UBL7
H2AX
DDX49
COPE
GTF2I
PHF13
RCOR1
SNRNP70
FDPS
JOSD2
PIK3R3
HSP90B1
GTF2H4
COG2
ZNF749
DCAF8
ARHGAP9
ELOC
RAB5C
ZC3H10
MRPL39
CTU1
TSC2
NTHL1
WASHC5
NSMCE2
GABPB1
DESI2
BOLA1
DCAF1
TRAF7
PARL
WAPL
MARS1
TMEM59
TCEANC2
NDUFV1
CAND1
IP6K2
CBWD5
U2AF1L5
U2AF1
TRAK2
STRADB
CHCHD3
RWDD1
CRBN
PHF12
SOX6
C11orf58
B3GALNT2
CBWD3
METTL25
CCDC59
VCPIP1
C8orf44-SGK3
KLLN
TTC4
COX7C
PNRC1
SF3A3
SLC7A6OS
PRMT7
PSMD2
MCU
CANT1
ADPRS
WDR87
SIPA1L3
TRMT61B
SLC3A2
THYN1
ACAD8
PABPC1
PLEKHM3
BRF2
ATF4
PRKACA
RPS19
BICD2
USP48
METTL9
GUSB
TMEM242
POLG
SMIM13
PTEN
SIRT2
NFKBIB
MANF
SSR3
RCOR3
ZNF500
TARBP2
FAM149B1
ECD
ZNF148
PSMD4
TIMM13
NDUFB5
MRPL47
THOC6
HCFC1R1
FAM228B
CCDC90B
RPS16
UBE3B
KCTD10
NOLC1
GFM1
COQ7
RPLP1
TRUB1
VIRMA
ASXL1
TMEM217
TBC1D22B
SERBP1
SESN1
CMTR1
UBA52
PCBP2
COA6
TFRC
NKIRAS1
EIF4A1
CDKN2AIPNL
DNM1L
POLR2E
NLK
RFXANK
BORCS8-MEF2B
BORCS8
ZC3H3
H2BC18
ZER1
CFAP20
HAGH
FAHD1
COPS7A
HPS4
RPLP0
NDUFAB1
LARS1
CAPN10
H4C11
NEURL2
CTSA
CACTIN
BUB3
XRRA1
SPCS2
SRP68
KAT8
SPRED1
WBP2
ATRIP
REXO1
BUB1B
ACTR1A
USP15
PARK7
ZNF518A
CLP1
TMEM230
H3C13
SF3B2
VCP
FAF1
PTDSS2
CWC25
CBWD6
KMT2B
SLC4A2
SLX1B
SLX1A
BOLA2B
BOLA2
WDR25
WARS1
RNASEH2C
PALB2
DCTN5
RPL15
HIF1AN
MRPS11
MRPL46
ZFAT
MDM4
RANBP2
ZNF225
TIGD6
HMGXB3
SNRPD3
GUCD1
POLR3D
PDE4DIP
WRNIP1
CFL1
DFFA
XPOT
EIF2S2
RPP30
SUMF1
CEP350
FBXO46
C5orf51
PTBP1
NOL10
CCP110
CHCHD6
ZFYVE28
SEC11C
RPL3
ZNF189
MRPL50
UBN1
GLYR1
CCDC150
PHAX
SEC61A1
RPL23A
SPHK2
FBXO28
RAD23A
CDK8
C12orf43
CFAP99
WDR4
SRRD
CDK5
FAM156A
DGAT1
SMIM12
ZNF451
NCDN
KIAA0319L
SUGP1
MAU2
SRSF2
MFSD11
RAB1A
MRPL3
FAM156B
ZNF2
CASC3
PPIA
VPS33A
H3C15
H3C14
PEPD
C19orf48
LRCH4
FBXO24
TMEM39A
CCDC124
IPO7
ZNF527
TMEM69
COMMD2
PANK3
HIRIP3
RASEF
TOP2B
RPL18
TOP3A
SMCR8
SFSWAP
RTF2
CNPY2
CLDND1
RPL6
SNAP47
SRSF1
CNIH4
KPTN
JMJD4
CAPN15
RTTN
AP5Z1
ZNF805
ZBTB4
MRPL48
CCDC86
UBAC1
AKIRIN2
POLR2A
RTEL1
FANCD2
RAD54L2
CNOT4
SPRYD3
RPS3A
H4C12
DDX46
ZNF133
SRPRA
WNK1
TBC1D22A
TIMM50
ATP5PO
TOR1A
MRPS23
ZNF335
SURF6
PKN2
DYRK1B
CCNC
GATAD2A
USP42
USP35
KCTD21
BOLA2-SMG1P6
MAGOH
SEL1L
FAM133B
RBSN
L3MBTL2
TMEM258
FEN1
EIF2B5
MRPL44
SCAMP3
CCNI
DRG2
HBS1L
KDM4A
AARS2
RPLP2
FASTKD1
H4C15
RPTOR
DUS3L
PSME3
GPBP1L1
IARS1
REXO4
CIAO3
EIF1
GPANK1
CSNK2B
FAM227B
DTWD1
SERP1
EIF2A
SERPINI1
PDCD10
TAS1R1
NOL9
MTR
DYNC1I2
SLMAP
PPP6C
HNRNPL
PDCD4
FBXW2
RERE
MON2
TMEM160
H2AC19
H2AC18
EIF5
SUFU
ZC3H11A
PPIL4
RAB5IF