ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX20230572 | Ishikawa
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◢ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◢ SRX535453: A-375

◢ SRX535454: A-375

◢ SRX5501657: A-375

◢ SRX5501659: A-375

◢ SRX5501661: A-375

◢ SRX10131662: Bronchial tracheal epithelial cells

◢ SRX10131663: Bronchial tracheal epithelial cells

◢ SRX20436771: DLD-1

◢ SRX20436779: DLD-1

◢ SRX22001291: DLD-1

◢ SRX22001292: DLD-1

◢ SRX22001293: DLD-1

◢ SRX10715331: HCB1

◢ SRX10715344: HCB1

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◢ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX20230567: Ishikawa

◢ SRX20230568: Ishikawa

◢ SRX20230569: Ishikawa

◢ SRX20230570: Ishikawa

◢ SRX20230571: Ishikawa

◣ SRX20230572: Ishikawa

◢ SRX20230573: Ishikawa

◢ SRX20230574: Ishikawa

◢ SRX10144542: Kasumi-1

◢ SRX10144543: Kasumi-1

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX7366779: MCF-7

◢ SRX7366780: MCF-7

◢ SRX7366781: MCF-7

◢ SRX7366782: MCF-7

◢ SRX7366783: MCF-7

◢ SRX7366784: MCF-7

◢ SRX244177: MM.1S

◢ SRX244180: MM.1S

◢ SRX327758: MM.1S

◢ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◢ SRX1637467: MOLT-4

◢ SRX1637469: MOLT-4

◢ SRX1637470: MOLT-4

◢ SRX24723215: MRC-5

◢ SRX24723217: MRC-5

◢ SRX24723219: MRC-5

◢ SRX24723221: MRC-5

◢ SRX2375362: MV-4-11

◢ SRX2375366: MV-4-11

◢ SRX14127531: OCI-AML3

◢ SRX14127532: OCI-AML3

◢ SRX14127543: OCI-AML3

◢ SRX14127544: OCI-AML3

◢ SRX18455086: OCI-AML3

◢ SRX18455087: OCI-AML3

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◢ SRX4023329: T-47D

◢ SRX4023330: T-47D

◢ SRX728779: THP-1

◢ SRX728780: THP-1

◢ SRX9730732: THP-1

◢ SRX9730733: THP-1

◢ SRX9730734: THP-1

◢ SRX9730735: THP-1

◢ CDK9: STRING

CTNNB1
MTF2
CLTC
MRM3
GLOD4
TMEM41A
LRP6
CCDC88A
PPP5D1
CALM3
SOD2
WTAP
GPAM
NCBP2AS2
NCBP2
TBL3
SSNA1
ANAPC2
ZC3H6
CALM1
MRPL21
IGHMBP2
CCNL1
SEC13
MXD4
KMT5B
HEXIM2
MRTO4
EMC1
DOLPP1
PRKACA
ATAD2
BRWD1
DDIT4
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
ATG14
NXF1
NOTCH2
ZFAND2A
HMGCL
IST1
KPNB1
NAGPA
STX18
LAMP1
TSN
SPATC1L
ZNF212
RCL1
MTMR2
COQ7
TMEM222
UBQLN1
ADPGK
CYCS
CDKL3
UBE2B
EIF2D
DDX23
DIP2A
COPS8
UBN1
GLYR1
NUP214
MCM7
AP4M1
DOHH
SPNS1
TOB2
WASHC2C
TCF3
PEPD
TRIAP1
SNRNP70
CALM2
AMOTL2
TRIP12
FBXO36
VPS37A
CNOT7
ARF4
ARNTL
ZNF721
PIGG
UBE2D3
CYP51A1
RPS28
NDUFA7
USP42
TAF5
RERE
TSPYL2
RASEF
PKM
ENDOV
CTDP1
PHIP
MYLIP
DNAJA3
EEF1AKMT4-ECE2
EEF1AKMT4
ALG3
PSMD3
PNRC1
ATRIP
SLC9A1
HEXA
ZKSCAN2
MRPS35
COQ9
CIAPIN1
ADK
TIMM22
HAGH
FAHD1
PI4K2A
COPS7B
TMEM199
POLDIP2
POMZP3
WDR53
FBXO45
WDR25
WARS1
ARHGEF12
KMT2D
WASHC2A
TXN2
GTF2H3
EIF2B1
MAIP1
NOC4L
DDX51
TCF12
HOXD8
PINX1
HSP90AB1
GHITM
SLC44A2
RAD23A
MRPL58
NEURL2
CTSA
DSTYK
KDM4B
COMMD1
CCT4
SPRYD3
CKS2
RBM42
DCP1A
CASC3
NMNAT1
LZIC
CFAP410
TOMM22
NBPF1
TBCB
POLR2I
ZSWIM7
TTC19
FUS
PMPCA
ENTR1
POLR2J3
PBLD
HNRNPH3
CCNL2
MTERF4
PRTG
C8orf33
MVD
SMN2
SMN1
TIMM21
FBXO15
RCOR1
SUMF1
UBC
DUS2
DDX28
CHCHD1
ZC3H3
U2AF1L5
U2AF1
PEX3
ADAT2
ACSL3
UHMK1
SARAF
ADNP
CUL4A
PCID2
TTC4
MRPL4
DCAF8
CRBN
MARCHF8
RLF
APTX
DNAJA1
ECSIT
STX16
VDAC2
ATXN2L
MANF
TUBGCP6
TAOK2
GMPPB
NABP2
ZFAND4
MAN1A2
TOB1
MFN2
ABAT
USP30
ARFGAP2
IPO11
TARBP2
TENT5C
SMG5
CLCN7
ZFPL1
CDCA5
MAEA
YPEL2
DIABLO
DYRK1B
HMGB1
USPL1
OAZ1
HPS4
SRRD
PELP1
TMEM217
TBC1D22B
ACOX3
TRMT44
SRSF11
LRRC40
IER5
NDUFS7
TIMM50
POLR3D
TMEM128
MRPS15
ALG1
MYZAP
GCOM1
DCAF10
TFRC
LMTK2
NABP1
GTF3C5
H2AX
AP5Z1
CFAP43
HNRNPL
AURKAIP1
RPS6KB2
IFRD2
MAPKAPK5
TMED2
PIK3R3
ID2
PHF5A
ACO2
TMEM11
FAM207A
CDKN2AIPNL
FOXJ3
SMPD4
MZT2B
LONP1
CATSPERD
PARL
HTRA2
DDX1
SRSF6
CDC25C
FAM53C
IP6K2
SPTLC1
CMTR1
WASHC5
NSMCE2
TBCCD1
DNAJB11
MRPL37
CYB5RL
PSPH
CCT6A
HNRNPAB
CCDC77
KDM5A
TRMT61B
OAZ3
AARS2
FRA10AC1
PCCB
RPL8
FBXO28
HOXD9
TEPSIN
NDUFAF8
ATG7
UQCRC1
WDR43
OPA1
ULK2
PPIL4
MCU
C6orf132
NDUFAB1
SP2
SESN3
HERPUD1
ETNK1
RPL22
PKN2
CABIN1
SPRYD4
FAM133B
PPT1
MTHFD2
ATP8B1
TOP3B
SNAPC3
TFDP2
NDUFS3
KBTBD4
YWHAQ
FBXW2
EXO5
FAM71E1
EMC10
PCIF1
ZNF148
SPRED1
RANBP2
SPOUT1
RMDN3
ZER1
MRPS11
MRPL46
PSMD8
CNP
VCL
GOLGA1
MED9
DYNLL1
SEC31A
PLEKHM3
NDUFV1
RRP7A
TAF15
RAD9A
PHAX
NLK
GSTO2
NSFL1C
TEDC1
ANKFY1
UBOX5
FASTKD5
PSME3
DNAJB12
ZDHHC5
CAPN10
FAF1
CBWD5
CBWD3
CBWD6
TIGAR
EIF4A2
MSTO1
NOC2L
ZNRD2
ORMDL3
CCDC43
ATP5MPL
STK19
DXO
LRCH4
FBXO24
AJUBA
RCOR3
TNKS
TULP3
PA2G4
ADPRS
XPO4
RFXANK
BORCS8-MEF2B
BORCS8
CACTIN
VPS33A
MON2
RPL13
LANCL2
TDRKH
SLC9A3R1
TAGLN2
UBALD2
KRT80
ASNS
PSTK
TMEM104
NAT9
PTP4A1
NUDT15
EIF3F
TBRG4
SRPRA
SECISBP2
ANXA7
DDX50
GIPC1
ZNF594
FEM1C
GARS1
GRHL2
TIMM44
HDAC4
PIGU
KLHL12
POLG
MICU2
RPLP1
SRP68
GTF2IRD2
GTF2IRD2B
PEX26
PSMF1
KLLN
PTEN
EDF1
ZNF839
PLK2
CCT2
DIP2B
FAM156A
FAM156B
ATAD3A
SLC7A6OS
PRMT7
TMPO
SUPV3L1
YIF1A
KPTN
ATP5MF-PTCD1
ATP5MF
SIVA1
GLRX3
WDHD1
SOCS4
RRBP1
NUP160
LDHA
DCPS
CANT1
H1-10
GATAD2A
LTO1
RAB4B
VCP
CCDC34
DNAJB1
NUP188
DOLK
TECR
RPL6
PTPN11
TMEM203
NDOR1
HIF1AN
LRRC59
C16orf70
WASF2
NUDT1
MRM2
TSR1
SGSM2
NAGK
RAD50
RUSC2
GABPB1
ZFAT
SURF6
METTL9
VAMP1
ZBTB45
CCDC134
PDCD4
NCL
CNBP
DCAF1
GID4
ATPAF2
PALB2
DCTN5
FAM204A
SFR1
EPHB3
RPUSD4
FAM118B
EXOSC8
RTF2
VCPKMT
SLC25A28
THOC3
NCOA4
GCN1
LIPA
TOP2B
ACAD9
C5orf51
SETD1A
DDX46
CLEC16A
RFX3
ASH2L
ELP5
CTDNEP1
NOL7
FEM1A
PARPBP
NUP37
SLC25A38
GNB2
MSMO1
NARF
SRSF5
ATP9B
ZFP1
LUC7L
UNK
SMIM13
SLC35B1
FAM161B
COQ6
CDH1
EEF2
THUMPD1
CZIB
POLR3E
MEF2D
ZNF337
TIGD6
HMGXB3
KHDRBS1
CUTC
COX15
FASTK
BLOC1S2
BOD1L1
ZC3H10
ATG101
RNPS1
NRL
PCK2
LZTR1
ARHGEF7
ATAD3B
WDR18
RNASEH1
EPRS1
GTF2I
RNMT
FAM210A
DOK7
ZW10
MRPL20
RPL18A
TJAP1
TSR2
CLIC4
PSMD6
LRRC57
HAUS2
EIF1
SUCO
MOB3A
IZUMO4
TEFM
UBIAD1
MARK3
TUBGCP5
FANCD2
FDFT1
SART1
POR
PDK2
MTG1
TMEM42
STARD7
TRAF2
PGP
R3HDM2
SH3GL2
PDE4DIP
HAUS5
DENR
PTPN4
CAPZA2
REXO1
MRPS7
GGA3
WDR6
RPSA
JPT1
PCNX4
CEP55
C10orf143
NOP56
HGS
ARL16
CEP350
PFDN2
NIT1
PUF60
DPP9
GPS2
KLHL18
KIF9
LGMN
MCCC1
RANBP3
CCDC130
HDAC6
TK1
AFMID
RUBCN
H2BC21
H2AC20
H2AC21
ZBTB20
UBA52
ZGPAT
ARFRP1
RAB5IF
PSMD7
RPAP3
DCP1B
PACSIN2
WDR81
STX6
C19orf48
PPAN-P2RY11
PPAN
MIGA2
IER5L
YY1AP1
DAP3
KCTD5
OGDH
RAB8A
ASB6
UMPS
MAML3
MRRF
GADD45G
NOCT
TAX1BP3
EMC6
RPL3
MRPS5
KLF10
HBS1L
KCTD9
CDCA2
TMEM39A
HPS5
GTF2H1
PSMC5
FTSJ3
PAK4
MDM4
THOC1
TFB2M
CNST
HMGCS1
ALKBH3
EXOSC3
ATF4
COQ10A
ASAH1
SMAGP
COQ8A
MICOS10-NBL1
MICOS10
BRAP
ACAD10
PNRC2
ZFAND5
OSCAR
NDUFA3
STIP1
PSMD12
TUSC2
SPC24
CDK5RAP1
LNPK
ABRAXAS2
SEC11A
FPGS
SNX13
ASL
ZBTB8OS
RBBP4
ASH1L
CENPH
THAP7
SFSWAP
EIF5
HNRNPM
SLC25A26
IL4I1
NUP62
ATF5
PPP4R3A
PRRC2A
PRPF19
SMIM10L1
PRH1-TAS2R14
PRH1
SLC25A42
CALR
TIPARP
KCTD11
C7orf57
SRSF1
RAVER1
INO80
ZNF740
CSAD
NEK9
SYMPK
FOXA3
RHNO1
FOXM1
EEF1AKMT2
CREM
ZNF326
STYXL1
MDH2
TRDMT1
MAK16
YEATS4
NFATC4
RBL1
TSNAXIP1
RANBP10
UNC50
COA5
RPP38
ZNF574
DDX41
TSR3
GNPTG
PLAG1
CHCHD7
NOL10
RUVBL1
EEFSEC
RPS3
STAT1
RPAIN
NUP88
MKS1
LRCH3
RBM4B
COG2
TMEM230
THBS1
IQCH
AAGAB
IDI1
NLE1
RPS15
DNAJC9
SLC25A16
KCTD7
NELFA
TXNL4A
TRA2B
RNF141
PLCXD2
GXYLT1
EXT1
CEP20
MRPL39
SF3B2
ASF1B
FAM76B
CEP57
ACBD7
RMI1
HNRNPK
MZT2A
EIF4A3
RPL35
ARPC5L
SHBG
FXR2
MVK
WFDC3
DNTTIP1
GLUL
ZNF75A
TIGD7
CCDC91
CEP131
MALSU1
NDUFA10
NUP93
ZNF775
TRMT2A
RANBP1
VPS26C
ABCF2-H2BE1
ABCF2
TRPC4AP
BCKDHB
ZNF595
ZNF718
UBXN1
CRY2
E2F6
PPIA
ING5
LOC101928764
SLC34A2
IARS1
PPRC1
NOM1
ZNF524
FIZ1
EEF1E1
THTPA
WBP1
BRIX1
KAT5
TECPR1
THRAP3
USP21
RARS2
ORC3
VAC14
GUSB
TUBGCP3
SDE2
CALR3
C19orf44
PRDX1
BRPF1
PITRM1
CAAP1
C12orf65
CCDC124
MRPL38
CALU
ZDHHC16
EXOSC1
FREM2
WDR4
YIPF6
CD46
ACTN4
ANKRD17
ZNF398
ZNF425
KATNBL1
NCOA3
MCOLN1
SUMO2
PMS1
ORMDL1
TRAPPC2L
GALNS
COA6
CLASRP
DSCC1
POLG2
ZCCHC4
MAN2C1
TAF3
ATP6V1C1
PGAM1
SF3A1
CCDC157
MRPL12
CSRNP2
BIRC5
C2orf42
TTC17
CHSY1
PHKG2
RBSN
CIAO3
DDX19A
NBN
IVD
CCN1
GLCE
UBAP2
EFCAB14
TPP2
PIN1
DPY19L4
KLF5
ECHS1
RAD23B
COX19
PSMD2
NDUFV3
H1-4
RPL10A
ATXN7L2
PODNL1
DCAF15
AVPI1
RAB11FIP1
MRTFA
GTF2B
SCFD1
DNAJC11
NUS1
NDUFS6
RPLP0
ZNF672
KAT8
FBXO22
PMPCB
SPG11
NEK2
DGLUCY
RPS6KA5
EHD4
PEBP1
DRG2
UBR4
SPPL2B
LSM7
CHCHD6
ARHGAP19
COX18
SCAF1
EFCAB2
LPCAT3
SYCE2
MTHFSD
EIF3A
FAR1
TTC9C
HNRNPUL2
ZNF500
PPP1R8
MST1
FBXL12
SC5D
TRUB1
MCF2L
DNAJC27
MANBAL
ATP6AP1
UBE3B
KCTD10
OXLD1
CCDC137
ZFAND1
TWNK
MRPL43
WDR61
ZSCAN25
NOC3L
C16orf95
PPA1
POLR2C
DIS3L2
AHCY
LATS1
DTWD2
MED4
TMEM9B
ALKBH7
TAF9
RAD17
AK6
GABARAP
TOP3A
SMCR8
TAF6
CNPY4
APLP2
PCDH9
POLR2J
RMND5A