ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX728779 | THP-1
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◢ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◢ SRX535453: A-375

◢ SRX535454: A-375

◢ SRX5501657: A-375

◢ SRX5501659: A-375

◢ SRX5501661: A-375

◢ SRX10131662: Bronchial tracheal epithelial cells

◢ SRX10131663: Bronchial tracheal epithelial cells

◢ SRX20436771: DLD-1

◢ SRX20436779: DLD-1

◢ SRX22001291: DLD-1

◢ SRX22001292: DLD-1

◢ SRX22001293: DLD-1

◢ SRX10715331: HCB1

◢ SRX10715344: HCB1

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◢ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX20230567: Ishikawa

◢ SRX20230568: Ishikawa

◢ SRX20230569: Ishikawa

◢ SRX20230570: Ishikawa

◢ SRX20230571: Ishikawa

◢ SRX20230572: Ishikawa

◢ SRX20230573: Ishikawa

◢ SRX20230574: Ishikawa

◢ SRX10144542: Kasumi-1

◢ SRX10144543: Kasumi-1

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX7366779: MCF-7

◢ SRX7366780: MCF-7

◢ SRX7366781: MCF-7

◢ SRX7366782: MCF-7

◢ SRX7366783: MCF-7

◢ SRX7366784: MCF-7

◢ SRX244177: MM.1S

◢ SRX244180: MM.1S

◢ SRX327758: MM.1S

◢ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◢ SRX1637467: MOLT-4

◢ SRX1637469: MOLT-4

◢ SRX1637470: MOLT-4

◢ SRX24723215: MRC-5

◢ SRX24723217: MRC-5

◢ SRX24723219: MRC-5

◢ SRX24723221: MRC-5

◢ SRX2375362: MV-4-11

◢ SRX2375366: MV-4-11

◢ SRX14127531: OCI-AML3

◢ SRX14127532: OCI-AML3

◢ SRX14127543: OCI-AML3

◢ SRX14127544: OCI-AML3

◢ SRX18455086: OCI-AML3

◢ SRX18455087: OCI-AML3

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◢ SRX4023329: T-47D

◢ SRX4023330: T-47D

◣ SRX728779: THP-1

◢ SRX728780: THP-1

◢ SRX9730732: THP-1

◢ SRX9730733: THP-1

◢ SRX9730734: THP-1

◢ SRX9730735: THP-1

◢ CDK9: STRING

DCAF12
RLF
ZNF684
IPPK
ZMPSTE24
MTMR9
CAP1
EXO5
CD33
CCAR2
SCNM1
LYSMD1
ITGB2
GRPEL2
ZFP69B
SH3BP2
RPS19
ALOX5AP
LAMP1
SPATC1
NFYC
NLRP12
CAB39
NCF1
WDR74
RXRA
LGALS8
FCER1G
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
PGK1
PGA4
PNP
PGA3
WDFY3
MTF2
ZNF408
ARHGAP1
ZFP69
NCF2
HBS1L
SETDB1
PPT1
YES1
MTPN
LUZP6
CD244
FAF1
URM1
VPS33B
RNF149
ATP5MPL
TLE4
STEAP4
SMAP2
PGA5
SNRNP200
PPP1R12C
ARHGEF12
XRCC5
POMP
ARHGAP30
MMACHC
MFSD2A
VCPIP1
C8orf44-SGK3
TIGD4
ARFIP1
STK36
RNF25
APPL2
RUBCNL
EXOSC3
MDM4
MEFV
NUF2
FOXJ3
CEACAM21
ITGAM
TMEM30A
TRIT1
IPCEF1
MRPS18C
HELQ
CCDC200
SREK1IP1
CWC27
PISD
VTA1
NMBR
TTC14
FEM1A
CLIC5
MRPL24
ABT1
SASS6
CARD8
PPIH
SP110
NIBAN3
MIA3
KIFAP3
RASA1
MED23
C4orf3
MED18
OAS3
IL16
HAUS6
TEP1
OAS2
PDCD2
RNPEP
SELENOH
MTRNR2L2
FAM207A
ADPRS
ARPC2
MED10
TRIM41
CD1A
PIKFYVE
GOLGA7
DOCK8
ZNF780A
UBL7
NIP7
COG8
USF1
KBTBD7
OTUD7B
UBXN8
TNFAIP8L2-SCNM1
TNFAIP8L2
TSSC4
SCAF11
NUTM1
NOP10
NCSTN
COPA
SIGLEC11
TCF12
UBR7
GON7
CBWD5
CBWD3
CBWD6
RPL37A
ZNF56
BRIX1
UCHL5
RO60
CD53
MTRNR2L8
INPP4B
C22orf34
ELOF1
B3GALNT2
TLR4
EPRS1
IFNGR1
UTP3
STK4
NECAP2
IL1RN
ERMARD
HIBCH
TMEM154
CHMP4B
GTPBP10
SDCCAG8
CEP170
C6orf89
CCDC149
FAM227B
DTWD1
PIGM
TMEM39A
DBI
C2orf76
RMDN1
IFRD2
KBTBD6
TNFAIP1
IFT20
EIF2D
ZNF484
ARPC3
TFB2M
CNST
RMND1
ARMT1
DCAF10
PGBD4
EMC7
METTL18
C1orf112
ZNF622
ARHGEF1
RPL37
PA2G4
WDR70
ZNF658
ATP2B4
CTSG
HMBOX1
INTS9
PDLIM2
ZNF410
DENND4B
NDFIP2
HIGD2B
BBS4
XRN2
TIPRL
UBAP1
NR3C1
CMTR1
TCTEX1D1
TRIAP1
CHCHD5
RGL1
ARPC5
THYN1
ACAD8
MTMR14
TBPL1
EXOSC4
APOL6
FBXO38
IPP
LILRA2
SKP2
LMBRD2
ALDOA
NUDCD1
ZNF226
HMGB1
USPL1
TMEM59
TCEANC2
SNAPC3
AOPEP
HK3
STAU1
ITGA4
EIF3D
TPRKB
CFAP298-TCP10L
CFAP298
MS4A3
NOTCH2
DISC1
NOL11
ADAM10
SNRPC
TOMM20
LILRB4
GALK2
COPS2
HARS2
HARS1
LRRC29
TOR1AIP1
ERLIN2
KCTD5
TAF11
ANKS1A
SRSF11
LRRC40
MRPS23
ATG16L1
TLE1
RNGTT
SDHAF3
PDF
FUCA1
SDHAF2
CPSF7
ALG10
NME7
BLZF1
TBRG4
PRRG2
NOSIP
NSUN5
TPM3
CUL7
PTK2B
TRIM35
TLE6
VIRMA
LRRC46
DPY19L3
EIF2B3
PPP4R3A
PRPF3
ISY1-RAB43
ISY1
SNX3
THOC5
PKN2
KIF2C
MAGEF1
E2F4
USP3
TRIP4
GGPS1
ARID4B
FKBP1A
FAM200B
TACC1
FIGNL2
IRAK1BP1
RTF2
CCL22
SCAF1
TPT1
LYPLA2
TBL3
TMEM33
TPK1
JOSD2
WDR61
NDUFS3
KBTBD4
NCOA3
MOB4
DR1
PDPR
ZNF197
SAMHD1
TTC13
ARV1
SNAPC5
KLHL20
LST1
OSCAR
NDUFA3
BOD1L1
RTCA
XRRA1
SPCS2
GADD45B
SRP9
MRPL3
ZNF614
VPS25
PHB
BOLA1
TATDN1
NDUFB9
GHRL
SNX19
PEX3
ADAT2
ZC3H3
DDX18
MTERF1
CAVIN2
RPS20
NAT10
CMPK2
NUS1
INTS12
GSTCD
ERI1
NUP133
MYBL1
CCT8
ZNF668
ZNF646
PTTG1IP
SCML1
FBXO28
ATG5
GPANK1
CSNK2B
LAMTOR5
ARID2
SEC31A
NDUFA12
P3H1
TOR1A
PPIL4
WASHC5
NSMCE2
HEATR1
ASXL2
MICOS13
HSD11B1L
TMEM43
CHCHD4
TMX3
CCDC102B
NCF4
MRPS35
RAB1A
ZNF398
HSPA13
ZNF425
TRIP11
DUSP6
TBC1D8B
TMEM222
ZFYVE1
GTF2H2
RAB44
CHMP7
PHACTR4
ZNF221
ZNF142
BCS1L
PPIE
DHDDS
ZNF350
ORMDL3
CBWD1
ARHGAP18
RGS18
GTF2H3
EIF2B1
ZNF224
PEX12
TRAPPC8
PRKCSH
CCDC151
AKR1A1
MYL5
ATP5ME
FPR1
TMEM127
CIAO1
SLC35B4
MMUT
CENPQ
PIGF
CRIPT
AOAH
UNK
ABRAXAS2
GTF2H2C_2
GTF2H2C
SCAND1
SNUPN
WDR55
MFSD4B
TRIM25
CHMP5
BAG1
PSMD3
RPIA
ALG10B
UBE4A
RNF139
MAPKBP1
RPAP3
MTIF2
TAF1B
UBAP2L
C1orf43
RBM45
AHI1
SF3B1
TIMM10
TCHP
MINDY3
RWDD1
SRPRA
STK25
CCDC86
PPP1R8
RPL5
SRFBP1
RAB27B
WNT2B
S100A9
ABCF2-H2BE1
ABCF2
RAD50
GNPAT
C1orf131
IBA57
WIPF2
COX7A2
MAD2L1BP
GTPBP2
PSMD7
PDSS2
CEACAM4
ATG7
LARS2
INO80B
SPG11
MRPS14
FAM120B
NTAN1
SYK
CSF2RB
EDEM3
TNFSF10
CIITA
SYMPK
FOXA3
PPP6C
DUS3L
CHMP1B
TERF2
TNPO1
ARL4A
MS4A7
TMTC3
CEP290
PARP10
RPS6KB2
PTPN4
PPME1
C2CD3
KIZ
TLN1
CREB3
PUM1
ZNF697
VPS26C
MDN1
CLK2
SLC24A1
SNAP47
JMJD4
COX5B
TIMM21
FBXO15
CLPP
LATS1
SLC30A5
DCP1A
SESN1
TPR
ODR4
CEP57L1
WDR7
NCKAP1L
THEM4
ICAM1
GIMAP6
ZNF337
PRCC
MAGOH
GET4
RPL38
C1orf109
TBC1D23
ATP6V1C1
CCDC30
ZMYND12
PPCS
KPNA5
OTUD6B
NKIRAS1
RPL15
ZNF225
YTHDF2
NFKBIL1
C1orf74
ATP6V1G2
SUCLA2
CYB5B
IL10RB
ERCC6L2
ZNF3
COX6A1
TMEM115
WDR43
TOMM40
ADAR
PHLPP1
PIGBOS1
PIGB
DBN1
AGGF1
N4BP2L2
PEX19
SDSL
ZNF444
DMAC1
TAF12
UBLCP1
RAB10
HAX1
ZNF318
SNX17
EIF2B4
RANBP3
SRSF4
TADA1
PAFAH2
TSN
BOD1
ETNK1
ANXA2R
SLC33A1
RPL27
PICALM
CLASP1
NMNAT1
LZIC
ZNF212
AHCTF1
FRG1
SECISBP2L
CTNNB1
ZNF547
TRAPPC2B
WASF1
CDC40
DCLRE1B
AP4B1
MLKL
ADSS2
RNF14
TMEM39B
MTHFD2L
COX16
DESI2
PLPBP
NUP58
TOR1AIP2
IL6R
BCL2A1
ETFDH
C4orf46
SRBD1
RIC8B
TRAK2
STRADB
MCPH1
CYP4V2
DAPP1
VKORC1
RRM1
NOXA1
TCTEX1D2
GPR137
RPS12
GUK1
GIMAP8
FRA10AC1
ELOC
NUP42
NFE2L2
DNAJC16
IFTAP
OR52K1
BRF2
TTLL4
SMIM20
MIER1
DNAI4
RAB43
METTL9
THAP1
SLC25A32
DCAF13
ZNF268
DNAJC10
CLEC11A
SOD2
WTAP
RPL29
NDUFAB1
PACC1
THAP12
GVQW3
TMCO1
ZC3HAV1
UBE2D3
SKIV2L
NELFE
CDC37L1
LOC100289561
ABCB10
RCHY1
CITED4
KIFC1
TBCE
ABHD3
CD274
HMGCL
SLC7A6OS
PRMT7
RRS1
DEF6
UBR1
ZW10
SART1
LUC7L2
SF3B5
MRPL45
RPAP1
RALB
CCT5
ATPSCKMT
ASNSD1
ASDURF
PHF13
IPO8
ERO1B
MTMR6
STXBP3
EFHC1
IL7R
UBR2
MRPS31
ZNF251
WDFY2
LSM2
PPCDC
P2RY6
DEFB1
ZNF148
INTS1
DHX8
CCZ1B
SGO2
SLC30A7
CPT2
SP140L
LAMB3
APH1A
EEF1AKNMT
PLSCR1
PEX2
SEC22B
CRYZL2P-SEC16B
IL19
IL10
PINX1
SLC30A6
TRPM2
RPL22
RALBP1
CDK5RAP2
NUTF2
CENPT
CLN5
CCDC15
ENPP4
SIGLEC6
NDUFV1
SPHK2
RPL18
SPRED2
PATL1
ADA2
ZNF749
MRPL55
KDM1A
RNF141
TRIM37
DET1
TMCO6
RABGGTB
NEDD9
OSBPL7
HCK
CCNL1
CFAP20
TRA2B
YARS1
S100PBP
TMEM101
PPP1R15B
RFC2
SLC16A3
PPP1R12B
RBM34
NBR1
ZNF879
EIF3E
CC2D1B
RASSF5
RUFY3
TRMT11
ADGRL2
TRIM69
ATP5MF-PTCD1
ATP5MF
SERPINI1
PDCD10
AP2B1
PCYT1A
TRAPPC4
RPS25
RTN3
RPS3
PHIP
SERBP1
TMEM186
PMM2
MED4
MEN1
WDR36
GPN2
TRAPPC9
ANGPTL2
SLAMF7
ZSCAN32
ZNF174
XPC
LSM3
ZSCAN30
SMIM14
KIAA1586
GMCL1
PRRC2C
MMADHC
PKD2L2
MRPL37
CYB5RL
ZNF235
CDK4
SLC1A5
PRKN
PACRG
TCTN1
ELMO1
DSTYK
ZNF189
MRPL50
STAM2
RNF216
TAF13
GAR1
VPS13C
LRIF1
BEST1
FCAMR
PDE4DIP
MRPL38
POLR1F
PWP1
KLHL18
KIF9
RC3H2
FAM162A
CCDC58
IFI6
ACP3
IPO11
RPS7
PALB2
DCTN5
ZNF230
TGDS
GTF2E2
PCM1
GTF3C3
SDHB
CCDC114
ABCA3
MKNK1
TFB1M
ADAM28
SP100
METAP2
MVB12A
SMIM8
C3orf86
RASAL3
TNKS
PPP4R3B
EED
PGM2
TMEM123
LINS1
ASB7
CMC1
DHRS4L2
ZBTB45
CLDND1
AFTPH
REXO2
FMC1-LUC7L2
FMC1
ZNF670
FAM104A
C17orf80
DGAT1
SH2B1
TUFM
NFX1
PRPF6
PPP4C
GNAI2
WDFY1
GOLGA5
OMA1
DAB1
G0S2
IL18RAP
CEP350
BRAP
ACAD10
CDC42
SVOP
AMIGO2
IFIT3
CCDC88A
BIRC5
SLC44A1
TMED5
CCDC18
CSNK1A1
VPS29
RAD9B
YWHAB
GORAB
ZNF706
NAT1
RANGAP1
PSMF1
UBE2Q1
LSG1
ATP6V0D1
RPS6
LYNX1-SLURP2
LYNX1
FAM222A
MAP2K1
ZBTB37
MAPK14
SELL
NCBP2AS2
NCBP2
CCDC43
KIF15
KIAA1143
RPA2
LEO1
RRM2B
VPS33A
SYPL1
VCPKMT
PUM3
ZNF669
SCP2
DHTKD1
COPS8
SPRYD4
ZNF451
PSMD9
HPD
CBR4
UCK1
PPIL3
NIF3L1
ELP3
RPL24
DBNL
DDX60L
PARVB
ARHGEF6
IFI16
ACVRL1
OPA1
ARHGAP9
MARS1
FBXO46
DDX41
DEDD
DYNC2I1
ZNF354B
SYNRG
OTUD3
CTDSPL2
SSBP1
RUVBL1
RPS13
RAB7A
MORC3
SMAP1
BANK1
ST3GAL5
CRBN
IPO13
EMC8
COX4I1
TMBIM4
VRK2
FBXW4
TMEM175
GAK
GNAI3
TATDN3
NSL1
SLC35E3
GINS4
STARD6
C18orf54