ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX367328 | 293
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◣ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◢ SRX535453: A-375

◢ SRX535454: A-375

◢ SRX5501657: A-375

◢ SRX5501659: A-375

◢ SRX5501661: A-375

◢ SRX10131662: Bronchial tracheal epithelial cells

◢ SRX10131663: Bronchial tracheal epithelial cells

◢ SRX20436771: DLD-1

◢ SRX20436779: DLD-1

◢ SRX22001291: DLD-1

◢ SRX22001292: DLD-1

◢ SRX22001293: DLD-1

◢ SRX10715331: HCB1

◢ SRX10715344: HCB1

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◢ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX20230567: Ishikawa

◢ SRX20230568: Ishikawa

◢ SRX20230569: Ishikawa

◢ SRX20230570: Ishikawa

◢ SRX20230571: Ishikawa

◢ SRX20230572: Ishikawa

◢ SRX20230573: Ishikawa

◢ SRX20230574: Ishikawa

◢ SRX10144542: Kasumi-1

◢ SRX10144543: Kasumi-1

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX7366779: MCF-7

◢ SRX7366780: MCF-7

◢ SRX7366781: MCF-7

◢ SRX7366782: MCF-7

◢ SRX7366783: MCF-7

◢ SRX7366784: MCF-7

◢ SRX244177: MM.1S

◢ SRX244180: MM.1S

◢ SRX327758: MM.1S

◢ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◢ SRX1637467: MOLT-4

◢ SRX1637469: MOLT-4

◢ SRX1637470: MOLT-4

◢ SRX24723215: MRC-5

◢ SRX24723217: MRC-5

◢ SRX24723219: MRC-5

◢ SRX24723221: MRC-5

◢ SRX2375362: MV-4-11

◢ SRX2375366: MV-4-11

◢ SRX14127531: OCI-AML3

◢ SRX14127532: OCI-AML3

◢ SRX14127543: OCI-AML3

◢ SRX14127544: OCI-AML3

◢ SRX18455086: OCI-AML3

◢ SRX18455087: OCI-AML3

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◢ SRX4023329: T-47D

◢ SRX4023330: T-47D

◢ SRX728779: THP-1

◢ SRX728780: THP-1

◢ SRX9730732: THP-1

◢ SRX9730733: THP-1

◢ SRX9730734: THP-1

◢ SRX9730735: THP-1

◢ CDK9: STRING

WDR74
SRSF7
HEXIM1
JPT1
SRSF2
MFSD11
TRIM28
JUN
ZBTB4
POLR2A
RPL5
PPM1D
CDC25C
FAM53C
H3C15
H3C14
RPL3
C15orf39
H4C14
RHOB
NGRN
C12orf65
ID4
TUBA1B
ILF2
HNRNPAB
FUS
HSPA1B
CIRBP
THADA
BCAR3
EIF4G2
SFPQ
POLG
PIK3R3
CALR
EIF4A2
KLF6
RPL41
PPP4C
H3-3B
RSPH3
RCC1
TAF4
H1-10
PRDX1
RPLP1
EEF1A1
ATF4
SND1
COQ8A
TRA2B
DUSP1
JUND
SRSF6
HNRNPH1
DDX5
CEP95
SLC38A2
H4C15
TPI1
GTF2H5
SETD5
INTS6
TRAF7
RPS14
KCTD13
SRCAP
LOC730183
YWHAE
ZBTB37
SOD1
GNAI3
TMEM242
RPL13A
SESN2
FAM219B
ECI1
GTF3C6
PABPC4
SIRT4
INTS2
WDR1
CBX3
HNRNPA2B1
COQ2
NCOA7
GBA
PPEF1
KNTC1
UBB
H2BU1
H2AW
EIF5
NUP133
FBXL3
SLC9A1
BTG3
UBE2S
ACTB
EIF4A1
CITED2
PIP5K1A
SEPHS2
NASP
RPS8
RBM39
NKIRAS1
RPL15
RPS2
CZIB
SMC1A
RIBC1
SNRNP48
E2F3
RPS4X
ZNF143
SRSF5
ZBED8
NOL11
EEF2
PRRC2B
RPL11
MYLIP
STMN1
SLFN11
TFRC
OAZ1
DNTTIP2
FSCN1
EIF1AX
NDUFV3
BAMBI
IDH2
SMOC1
NOTCH2NLC
NOTCH2
CBX5
HNRNPA1
SPECC1L
NSF
NOP14
GRK4
DPP9
HSP90AA1
EFCAB2
LTA4H
RBM26
TP53BP2
RRP1B
HSF2BP
PPIA
SRSF1
NFYC
HMGN2
POLE4
SCAMP2
MAT2A
RPL6
CALM2
C19orf48
S100A13
CHTOP
HSDL2
DDX17
SLC1A5
PPP1R10
MRPS18B
TOB1
SF3B4
RBMX
EIF1
LUC7L2
YIPF6
FMC1-LUC7L2
FMC1
PSRC1
RBM12
CPNE1
NUP214
TUBB4B
TSPAN3
POLR2J3
LUC7L
TBCE
NABP1
MTRNR2L2
MAPT
SOD2
WTAP
LIN9
FAM200B
PSMC6
RPL31
ALDH3A2
MTHFD2
BTBD10
ABCA5
ARIH1
KIF5B
DEGS1
TIA1
RNF220
XBP1
MTHFS
GADD45A
B4GALT3
MKNK2
DCPS
TUBD1
RPS6KB1
MCMBP
C16orf72
LAP3
MESD
ATP5PO
AFF1
RAB11A
RPL19
CHRNA5
DCAF8
NCL
WRAP53
TP53
MORC3
ZDHHC4
SIPA1L1
UBC
TAF1D
C11orf54
TM2D3
PKM
DGCR8
RPP25L
ALOXE3
EIF4A3
TAF15
HINT3
TAOK1
SNX3
HSPA5
SRRM2
NOTCH2NLB
NOTCH2NLA
YBX1
FZD8
HEXIM2
KLHL11
TGOLN2
ARPC1A
H3C1
ZNFX1
CHEK1
CDK1
UGCG
BORCS5
MCL1
DYNLL2
BLOC1S5
SRSF3
SDHAF4
MSH6
ID2
RNPS1
UGP2
H2AX
THOC3
SACM1L
TRAF4
DLX1
CALM1
ZNF771
ULBP1
VAMP1
CENPH
ESR2
ALDH7A1
YWHAG
RBM25
RNF122
MTF2
IER5
FAM71E1
EMC10
DDX3X
H2AZ1
HERPUD1
GGPS1
ARID4B
IMPDH2
ALDOA
LSM14A
GGA2
ADPGK
AGL
ZNF280C
PARP16
PHF10
USP10
OAZ3
RPL24
RCBTB2
KLC1
C1QTNF6
SLC20A1
EXOSC9
HDAC1
DHRS12
ACAD9
RPS15
RPL37A
RBBP6
WBP11
C12orf60
SMYD4
RPA1
MTRNR2L8
ASCC1
ANAPC16
DHX9
CEBPA
MAPK3
POLR3E
ATF3
ACTG1
MESP1
MAP3K21
IL4I1
NUP62
ATF5
MICU2
NUDT1
MRM2
GANAB
HMGB2
DDX39B
CFAP20DC
GDI2
LRCH3
USP1
TSC22D2
RNF146
UCHL1
MSX1
UFL1
ZBED4
ATP1A1
RPSA
RPL10A
RGPD2
RGPD1
AMZ2
NXF1
GORASP2
CDK12
SP1
RPL13
TXNDC15
GLUL
HNRNPDL
ENOPH1
CLSPN
SOAT1
HSPA1L
HSPA1A
RPL29
DYNLL1
LENG8
SRSF9
SLC22A4
HDHD3
PMPCA
ENTR1
PCIF1
TTLL12
SLIT2
EZR
DMWD
H2AZ2
PCBP1
NCOA5
ZWILCH
RPL4
BUB3
C12orf57
NEK4
TARS3
WDR35
HACD3
ADAM17
BRD2
ZMYM1
MTMR2
YWHAQ
VPS72
HNRNPR
MTF1
BPHL
EPC2
ZSWIM7
TTC19
FTL
FDXR
CCT7
PRADC1
TMEM63A
RPS19
UMPS
SEC31A
THAP9
PHGDH
CSNK1E
RPL12
LRSAM1
COMMD4
FTH1
EXOC7
TRA2A
DNAJC25-GNG10
DNAJC25
UBA2
PUM1
DDIT4
KANSL2
SLC5A3
MRPS6
CASP3
PRIMPOL
ZBTB25
HINFP
ZBTB1
TSNAX
RPL22L1
BCLAF1
ZNF830
CCT6B
DNAH14
PRMT2
TEX30
MAN2C1
ERMARD
ACTN4
MRPL17
DPY30
RBBP7
FAM89A
TUBGCP3
DDX19B
AARS1
KHDC4
MFSD14A
PMF1-BGLAP
PMF1
ZCCHC17
SNRNP40
TMED4
LRIF1
SAT1
SLC7A5
RAP1GDS1
ATP2A2
GNA13
ISL2
CHIC2
RTL10
GNB1L
GLS
FASN
ATXN2L
SLC25A19
SLC35E2A
ARF6
DNMT1
PAN2
RPAP2
GLMN
MSRB2
ING3
BOD1L1
GCN1
COMMD6
PUM2
PIGF
CRIPT
TTC32
BTG1
SOX4
PPP6R2
CKB
MAEA
PELP1
ANKRD13C
COX20
MAGI3
SPTAN1
INTS7
DTL
MYL6
HSP90B1
CANT1
HIRIP3
SLC26A2
C22orf39
ZNF627
SLC16A1
TUSC1
NDEL1
AKAP7
CSRNP2
LRRC37A3
CDC20
THUMPD2
REEP5
PRKACB
ADM
MCM7
AP4M1
MANF
NOP56
YEATS4
SZT2
MED8
RBMXL1
KYAT3
SREBF1
MRPS21
ZYG11B
SLC33A1
H2AC19
H2AC18
GPATCH3
TBC1D22A
RBM34
SIL1
ZBTB2
PHF14
PTMS
HOXD13
NEFL
CANX
TOMM20
MATR3
CLN5
HES1
SETD9
ARL6IP1
CD164
STT3B
YWHAH
CPT2
HFM1
ILKAP
MOB4
RPS15A
AKR1A1
PIP4K2B
PI4K2B
MIF
NCKIPSD
NAV2
RPS3
RPS7
HSPA8
CSE1L
IFNAR1
TEX14
RAD51C
ADAMTS1
TRIM13
DHX15
MBOAT2
PRPSAP2
DNAJC27
RPL7A
MED22
EPM2A
SMURF2
PABPC1
OXLD1
CCDC137
SLC25A3
SUMF2
RPL9
LIAS
CSDE1
C21orf91
C15orf61
SCAF4
FAM117B
CKS2
SRP68
DNAJB1
RBM8A
HACL1
BTD
PSMB3
PRDX3
P2RX4
HSPA6
SLC3A2
TAOK2
TM9SF4
NUP188
DOLK
XPO1
ARL1
IP6K1
GUSB
PPP1R8
GAPDH
LUC7L3
SLC39A10
SLC25A4
COPS6
BMP2K
ZNF131
POLE3
C9orf43
ANKRD54
EIF3L
RNF149
NSRP1
SQSTM1
THOP1
CYCS
POLR3B
NTMT1
PDSS2
RASSF1
MOSPD2
FANCB
SNRNP70
TRIM41
TSGA10
SEC14L1
NSUN4
MRPS14
TMEM116
ERP29
MCM5
OSTM1
KMT5B
MPI
EIF3A
TMSB10
MACROH2A1
ZC3H4
TRIM65
H4-16
USP25
FOXO3
ING5
RPP38
TOB2
LZTR1
TOE1
MUTYH
H4C3
MAP3K3
NT5DC1
HEATR1
OLA1
DIP2A
DCAKD
RPLP0
FAM133B
SRSF4
EXOSC10
PRPF38B
ENO1
ARL15
PCGF6
UCHL3
ANXA11
ZKSCAN2
CDKN2AIPNL
RANBP2
UBAP2L
C1orf43
PMPCB
TMEM39B
VPS37B
UHRF1BP1L
PRPF4
CDC26
MED11
ZNF589
MVK
MDM2
CNOT11
SELENOW
EZH2
ACACA
TADA2A
SLC16A10
SYP
BCL2L13
ADIPOR2
RPL23
HYLS1
BTBD1
THNSL1
TBC1D4
MRGBP
NBPF1
ATXN7L2
HNRNPU
USP39
PRRC2C
C2orf68
SLC25A11
RNF167
ERO1B
URB2
TAF5L
PPP6R1
IREB2
H4C8
CD320
USP24
TMX1
UNK
SPRYD3
RBSN
ZNF839
RPS24
SMARCC1
H2BC21
H2AC20
MSTO1
CCDC200
USP38
NAXE
TNFRSF10B
PTBP1
C7orf25
CLNS1A
SLBP
SRRM1
ADI1
TMEM128
MRPL40
HIRA
PSMG3
TCAIM
PYCR2
TPRA1
BLOC1S4
UBTD1
MMS19
RPF2
SMIM13
HASPIN
ZDHHC14
SERTAD2
BFAR
CCNL1
PSTK
ZNF565
POLR2J2
ZNF146
STIL
UBE2Z
IMMT
POLD2
COIL
SF3B1
GEMIN8
BSG
DDX6
TBC1D2B
STRAP
PUS7
VIM
MRPS15
IPO7
C10orf143
ZNF326
PITRM1
TNRC6B
NPM1
GEMIN4
MCRIP1
ANKRD31
LYPLAL1
RBFOX2
FARP2
PARK7
FBXW2
DNAJC9
MEF2A
NARF
ZFAND5
HACD2
SCN11A
WDR48
EIF3K
MAP4K1
ENAH
PSMA4
UBQLN2
STARD7
SLTM
B2M
PFKL
POU4F1
LATS1
ZNF574
HNRNPD
CCZ1B
ANGEL1
OSCP1
ALG6
UPF1
PPP1R12C
MRPL39
RERE
SELENOT
GABPB2
MYDGF
SDHC
MAP2K2
DARS1
GPX4
RPS13
LDHA
SLC25A36
RPL17-C18orf32
RPL17
CKAP2
HLCS
CARS2
PCMT1
CSK
TXNRD3
USP48
WNK1
RPAP3
TMED7-TICAM2
TMED7
MGAT1
SNRNP25
POLR3K
SDF2L1
KEAP1
TRAP1
TXN
GALNT2
ELAC2
CDC6
C16orf95
MEPCE
PSMB2
ZCWPW1
METTL23
JMJD6
BTF3
NUCB2
RPS9
PIM3
TIPIN
H4C5
RASA2
ATPAF1
ZNHIT6
CNTLN
IGF2R
TARBP1
NRDC
MRPL53
TYK2
FAM162A
CCDC58
TNKS2
FER
PCDH9
OAT
ZNF282
COA7
RNF19B
C5orf34
PLA2G4C
TIMP2
SP2
ASNS
RBM15
NPRL3
ZFP36L2
AUH
RNF10
LRP11
UBA52
ADSS2
TNPO1
KDM5C
RPL27A
EDRF1
TMEM50B
PCBD2
HMGN1
MAFB
NELFCD
TBX2
NUCKS1
CNBP
WDR33
CCDC66
TIMELESS
ZDHHC7
MPV17
STX17
STXBP4
COX11
CNKSR3
H2AC21
RAD52
TCP1
MRPL18
SNX5
MGME1
TRIM26
DYNLT1
KNL1
MAP2K7
NDUFS7
ATG14
FDPS
WBP2
KIF1B
HNRNPA3
COPZ1
DYRK3
RNF135
VARS2
ZSCAN12
CCSER1
PDCD4
DR1
RCHY1
RPL36AL
MGAT2
IPP
RFWD3
LNPEP
UBE3C
CMC1
FKBP4
AUNIP
KAT2A
CGN
D2HGDH
SMURF1
PHIP
CYP51A1
CWC25
TIMM44
METAP2
GNPAT
C1orf131
CTH
GTF3A
CLTC
CCDC88A
PBLD
HNRNPH3
LTN1
N6AMT1
TECR
UQCRQ
GDF9
ATP6V1G1
ADSL
TRIM25
CSNK1D
SYNCRIP
SYAP1
KIF23
SGK1
DIS3L
SPATA20
SIN3B
RMND5A
PRRC2A
PDHB
IVNS1ABP
ERN1
H2BC12
H2AC12
CPD
ZNF592
TSPAN17
KHDC1
MRPL3
SSU72
C2orf42
POLR2D
RACK1
TNIP2
NISCH
MSI2