ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1637470 | MOLT-4
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◢ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◢ SRX535453: A-375

◢ SRX535454: A-375

◢ SRX5501657: A-375

◢ SRX5501659: A-375

◢ SRX5501661: A-375

◢ SRX10131662: Bronchial tracheal epithelial cells

◢ SRX10131663: Bronchial tracheal epithelial cells

◢ SRX20436771: DLD-1

◢ SRX20436779: DLD-1

◢ SRX10715331: HCB1

◢ SRX10715344: HCB1

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◢ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX20230567: Ishikawa

◢ SRX20230568: Ishikawa

◢ SRX20230569: Ishikawa

◢ SRX20230570: Ishikawa

◢ SRX20230571: Ishikawa

◢ SRX20230572: Ishikawa

◢ SRX20230573: Ishikawa

◢ SRX20230574: Ishikawa

◢ SRX10144542: Kasumi-1

◢ SRX10144543: Kasumi-1

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX7366779: MCF-7

◢ SRX7366780: MCF-7

◢ SRX7366781: MCF-7

◢ SRX7366782: MCF-7

◢ SRX7366783: MCF-7

◢ SRX7366784: MCF-7

◢ SRX244177: MM.1S

◢ SRX244180: MM.1S

◢ SRX327758: MM.1S

◢ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◢ SRX1637467: MOLT-4

◢ SRX1637469: MOLT-4

◣ SRX1637470: MOLT-4

◢ SRX2375362: MV-4-11

◢ SRX2375366: MV-4-11

◢ SRX14127531: OCI-AML3

◢ SRX14127532: OCI-AML3

◢ SRX14127543: OCI-AML3

◢ SRX14127544: OCI-AML3

◢ SRX18455086: OCI-AML3

◢ SRX18455087: OCI-AML3

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◢ SRX4023329: T-47D

◢ SRX4023330: T-47D

◢ SRX728779: THP-1

◢ SRX728780: THP-1

◢ SRX9730732: THP-1

◢ SRX9730733: THP-1

◢ SRX9730734: THP-1

◢ SRX9730735: THP-1

◢ CDK9: STRING

CDCA3
HHIP
WDR74
PRCC
BTRC
TSNAXIP1
RANBP10
TCEA2
AP2S1
TMEM115
MMACHC
PKIG
CHMP4B
IFRD2
NUDCD1
FEM1A
KBTBD7
PHF12
TMEM11
PHB
GTF2H4
SMPD3
CLPB
AHCYL2
ALDH1A2
GSPT1
CALR
MRPL24
SCNM1
LYSMD1
ST3GAL2
CALR3
C19orf44
BANP
ATP2C1
ZNF595
WDPCP
MDH1
KANSL1
KBTBD6
STAU2
CXCR4
NPRL2
CYB561D2
PI16
RBL1
C3orf86
HMBOX1
INTS9
VCPIP1
C8orf44-SGK3
C1orf159
PEMT
SLC4A2
CDK5
ZFYVE1
CRTC2
MICOS13
HSD11B1L
ZNF444
IQGAP2
DEGS1
BOD1
PPRC1
KMT2B
CHCHD2
SHQ1
ING3
INVS
ERP44
SCAF1
LZTFL1
H2AZ2
PNKD
AAMP
PANK4
PPP1R16B
TMTC3
CEP290
PAFAH2
NEIL3
DCLK3
MAD2L1BP
GTPBP2
ZNF331
VPS50
HEPACAM2
MND1
DDX23
LST1
GSK3A
TLR9
FXYD2
PPP1R12C
CD1A
LAIR1
UNK
ABCF2-H2BE1
ABCF2
RAB37
KRTAP16-1
BNIP3L
ZNF225
AP2M1
EPHX2
UBR2
CTU1
REPIN1
ACTR1A
SUFU
DCAKD
NMT1
DSTYK
GATB
MSL2
FBXO48
APLF
VIPAS39
AHSA1
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
FBXL19
C12orf57
FAM222A
GFUS
CCDC146
ZNF335
CCM2
WNK1
ZNF337
SLC35B4
ZNF821
TLR6
BIRC5
TSSC4
STAU1
TIMM21
FBXO15
KCTD9
CDCA2
TNFAIP1
IFT20
LDLRAD4
CCDC114
LAT
RPGRIP1L
FTO
HSPA13
PSMF1
MAP1LC3B2
NTAN1
ITGA4
RIC8B
STK25
MKRN3
GZMA
DFFA
PPP1R12B
POLDIP3
PRPF40B
TGM6
ELOC
LARS1
RGL4
TFEB
NBEAL2
STAP1
BICD2
FAM193A
H6PD
NUF2
TMEM101
TTI2
CAPN15
MRPL1
ARHGEF3
SLC47A1
FASTKD1
FBXW11
PTK2
ZFYVE19
DNAJC17
JOSD2
CCP110
CCNG2
NME1
THYN1
ACAD8
BORCS7
SYMPK
FOXA3
TFPT
PRPF31
ZBTB45
RPS26
UBQLN4
LAMTOR2
DHX33
TNFRSF4
CCAR2
SSBP1
HECTD1
PHF13
N4BP2L2
PLK1
NET1
TMC8
ARHGAP24
PEX26
ZNF500
ATAD2
RPIA
RPL29
DESI2
DUS3L
ZGPAT
ARFRP1
MED23
UTP3
ZNF165
RFX8
ZNF354A
MX2
SOX6
C11orf58
ZNF133
RHCG
FAM185A
FBXO46
TMEM258
FEN1
FAM168A
NCLN
SNX17
EIF2B4
ICAM2
NUCB2
EPHA1
PRRG2
NOSIP
MFAP4
OR10T2
ZNF56
RANGAP1
COPS4
DNAJB4
CDK8
WDR87
SIPA1L3
TES
ATXN7
MED15
MEN1
IPO4
RETNLB
COX7C
MAMSTR
ZNF354B
LCK
DYNC1I2
MBNL1
LYST
DBNDD1
ORMDL3
NSFL1C
RTTN
TMEM245
SLC33A1
CCDC90B
RNASEH2C
SIRT4
RALGAPA2
DLC1
CHCHD3
ZFYVE28
CFAP99
SMO
ADORA2A
FIGNL2
BRF2
STX18
FAM228B
WBP2
SF3B6
TRAF3IP3
NUDT13
EIF3F
CDK5RAP1
ZNF749
ZNF226
TRAPPC3
RAB1A
CLIC1
SUPT4H1
TAF3
ZNF408
ARHGAP1
DCP1A
TTC13
ARV1
TMEM59
TCEANC2
CIAO2A
CLEC16A
UBC
AURKAIP1
TRIP4
GALK2
COPS2
NDUFB3
FAM126B
TTC33
BUB1B
WDR24
SVIP
TLE4
ZSCAN22
TBC1D31
C19orf53
RTEL1
PANK3
USP48
ASNS
MRPS18C
HELQ
AAR2
MYO1G
GSTA4
TRAT1
TSC1
GFI1B
CFAP20
TCF3
CALM2
AQP3
SNRPD3
GUCD1
GPANK1
CSNK2B
RABAC1
IDNK
SELENOH
CCNI
PIGU
ZW10
SNRPB
ZMAT5
UQCR10
TNPO3
ASXL1
SF3A3
TMEM102
TRAF7
USP30
ZNF101
HDAC9
RPL18A
TOR1AIP1
PHF23
TUT1
MAF1
YIPF2
TIMM29
MTMR9
SMARCAL1
RACGAP1
NUTF2
CENPT
ATP2A3
SUGP1
MAU2
GPKOW
MCM7
AP4M1
PSMD11
KAT7
NOP14
GRK4
ZNF140
PEX3
ADAT2
KRR1
PTDSS2
LAX1
HEMGN
MTF2
TMEM229B
ETFDH
C4orf46
COX16
CLDND1
TMEM127
CIAO1
KCTD5
SIRT2
NFKBIB
PPIP5K2
RBM6
SMARCA2
SCRIB
UBAC1
ADARB1
ARHGDIB
PTCRA
HEXIM2
THRAP3
ZNF354C
SLA
PEAK1
HMG20A
GTPBP3
ZSWIM8
HEXIM1
GRAP2
MYLK4
SLC26A11
TACO1
SSH2
REXO4
TMEM160
ZNF527
ZNF169
C16orf91
ZSWIM9
LIG1
ABCB8
GRHL3
RPS7
NDUFS3
KBTBD4
RBBP5
ANTKMT
AQR
YJU2
MED18
DOCK10
ZNF235
MRPL44
RBM28
GFM2
FDPS
VKORC1
ZNF224
CCDC150
ARHGAP4
BUB3
WBP1L
PRDM1
CTHRC1
CD3E
OR10P1
RPS20
ALG10
CD28
DIABLO
MTBP
MRPL13
PPP5D1
CALM3
UBE3B
KCTD10
GTSE1
SLC32A1
RPL23A
AOAH
KIF20A
BRD8
ATP5F1D
ZNF343
OSCAR
NDUFA3
ESCO2
PA2G4
PLAAT5
ANKRD40
H4C3
NUCB1
SERPINI1
PDCD10
TARBP2
VPREB1
ARMH3
WDR46
PFDN6
SNAPC3
DHX8
DEF6
KDM3A
UMODL1
VRK1
NOP16
HIGD2A
ZNF276
ARHGAP9
MARS1
TCF7
SMG8
TRAK2
STRADB
RPS13
MRPS31
MAP3K7CL
CASS4
ASIP
METTL11B
CCDC88A
RUVBL1
RPP40
GOLGA3
TMEM123
UHRF2
FAM8A1
MTERF4
PPP2R5B
NFKBIZ
CUEDC1
AHCY
PUS10
PEX13
RUFY3
SOD2
WTAP
SLC25A19
TOMM40
PTPN22
TMEM222
TUBGCP3
SDCCAG8
CEP170
BPI
CIC
WRNIP1
UTRN
CFAP410
GPR137
CCDC200
APOBR
TBX6
DNAJC2
NIBAN3
ALKBH3
SERBP1
LIN37
ADGRE2
SLC7A8
SDE2
MTRF1
DGAT1
PRKCI
PPFIBP2
MRPS16
CFL1
SIRT6
ANKRD24
MEF2C
TOE1
MUTYH
AGK
ZNF850
SCN3A
INTS12
GSTCD
ZSCAN5A
GTF2H2C
GTF2H2C_2
PCM1
FCSK
SEL1L
KLHL20
CTDP1
CHMP7
C12orf73
KRI1
UBE2V1
NEDD8-MDP1
NEDD8
GMPR2
FNDC11
LSG1
PIK3CG
NKD1
CD3D
EMSY
INO80B
OSBPL8
EPSTI1
PABPC1
CNPY2
CTF1
ASAP1
EIF4A2
ARHGAP45
CNOT4
ZNF227
STING1
METTL26
RPL22
C17orf75
C12orf43
GINS3
CLTC
NDUFS7
HBP1
STARD10
ATP5MF-PTCD1
ATP5MF
TMEM143
SYNGR4
MAX
H4C8
BOLA1
FTL
NR1H3
ACP2
CASP8
EIF1AD
BANF1
NEIL2
MTA3
FKBP5
RAB30
TRAF3IP2
BRWD1
NRDE2
SIGLECL1
NUP153
VPS52
RPS18
OR1F1
LRRC29
SLC24A1
RPL27
SLC39A3
ARMC1
RNF220
S100A5
TSC2
NTHL1
ING4
VPS41
ZC3HC1
CYP2U1
GABPB2
UGT1A5
UBB
ZMPSTE24
ZCCHC8
GCSAML
SDHAF3
DDX49
COPE
GTF2H2
DUSP2
MRPL3
CHML
TMEM41A
ALG10B
NUMA1
LRTOMT
JRK
SPC25
COPS7B
PDE6D
RPS3
RAB5C
ADO
ARHGEF18
ITGAL
GTF3C5
AKIRIN2
ZNF548
IL10RA
ITK
DERL1
STYK1
EXO1
HSPH1
SLC39A8
SOAT2
THEMIS
PALD1
ZNF189
MRPL50
EIF5B
TXNDC9
SNX16
RAB29
ZKSCAN2
DMAP1
ZNF277
DOCK4
HMGB2
KCNN3
HDAC7
MB
PRAF2
PTPRCAP
ZFPL1
CDCA5
MRPL48
NELFB
ZNF605
OR4K15
TTC4
IFT74
PLAA
FBXO25
FRA10AC1
TOP3B
SF3B5
MLEC
SREK1IP1
CWC27
ATP5PO
BUB1
PSD4
TMEM199
POLDIP2
STOML2
RASAL3
CALM1
UBL7
ZNF652
CNIH4
AP1G1
FAM207A
TRUB2
COQ4
CTNNB1
PES1
INTS4
SPAG8
CSTF2T
DPY19L4
MDC1
GPR171
RPS3A
CDK19
AMD1
ZNF570
ZNF569
ZSCAN20
NMNAT1
LZIC
RALBP1
MTR
ZNF230
PLCXD2
ZWILCH
RPL4
C16orf54
LRP6
FIS1
ESPL1
PRSS23
PEX12
KIF15
KIAA1143
LETM1
SLFN12L
HEMK1
BRMS1L
LRRC1
IPPK
SRRT
ARHGAP30
TNFSF4
BMS1
CLP1
TOR2A
IZUMO1
ERAL1
ZNF584
CCDC174
ZNF350
PSMB6
ZNF45
TNFAIP8L2-SCNM1
TNFAIP8L2
H2AX
IPO7
ZNF184
NUP54
CDK5RAP2
CWC22
ZNF628
PROSER1
NHLRC3
TAB2
SMUG1
CDC14B
HHEX
SLC3A2
PSMC3
PRPF4
CDC26
MAD2L2
TBL3
LMNB2
ARHGAP15
ZNF420
MRPL58
CLDN12
MC1R
VAV1
PSMD3
ZNF805
MGRN1
HSCB
CHEK2
DIPK1A
ZBED4
ZCCHC4
GNB2
RPL37
RAB27B
GAS7
SEC11C
MRPL54
APBA3
ANAPC5
VPS25
MAPRE2
HSD11B1
ZC3H6
THOC6
HCFC1R1
RPLP2
NR1H2
RNF125
TOX
MRPS23
TMEM43
CHCHD4
GBA
SLC25A51
ABLIM2
METTL9
NOLC1
ZNF554
RCOR1
C6orf89
TMEM129
TACC3
ZNF773
PPP1CC
PBXIP1
H4C12
SCAND1
OGG1
TERF2
INTS5
PPIL3
NIF3L1
ZSCAN23
KCNA2
CAPN10
SNRPC
METTL7A
MDM4
MOB3A
IZUMO4
ACBD6
VPS13B
APBB1IP
TMEM186
PMM2
TM9SF4
KMT5B
LTN1
SH2D6
CKAP2L
VGLL4
C2
ABLIM1
EHMT2
ACSL6
WASF1
CDC40
TOGARAM1
KLHL28
ZNF407
KMT2D
SMG5
MYL6B
PIGL
SEC13
ZNF37A
PPIL2
ZNF688
MRTO4
EMC1
TATDN3
NSL1
LTA4H
ELP6
SNIP1
ZNF473
VRK3
TTC26
NDUFA2
IK
ANKRD17
HNRNPA1L2
H4C4
DNAAF2
SART1
RFXANK
BORCS8-MEF2B
BORCS8
ZNF451
GTF3C3
QTRT2
CCDC191
TRMT1L
SWT1
TPX2
CST7
LUC7L
CSRNP2
ZBTB4
POLR2A
WDR11
ATXN2
DFFB
CEP104
COMMD9
PHB2
SLC35E2B
GEMIN6
SSR3
H4C14
LAS1L
MTOR
MFSD3
S100Z
MIS18A
CPSF1
SUPT7L
SLC4A1AP
IGF1
PANX3
COMMD2
SNAP47
JMJD4
ARHGAP19
ZAP70
PARP2
THAP1
PIH1D2
NKAPD1
SESN1
HIRIP3
ZNF862
CEP57L1
TMBIM4
MRPL30
MITD1
ZNF384
CD2AP
UTP11
ANKRD13D
FOXP1
JMJD1C
SMN2
SMN1
SEPTIN9
ENOX2
CSDE1
ETFB
AHCTF1
COA6
DPEP2
EIF2D
GAS2
PNPLA6
TIAL1
BET1
EVI5L
SLC35A3
SLC35A1
ZNF785
RFX7
DDX1
C1orf109
PUM3
CDCA8
NPY
SNX27
SKP2
LMBRD2
PTRHD1
CENPO
RAD52
ZNF32
SLX4IP
ZNF175
MAIP1
DRG2