ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1637469 | MOLT-4
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◢ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◢ SRX535453: A-375

◢ SRX535454: A-375

◢ SRX5501657: A-375

◢ SRX5501659: A-375

◢ SRX5501661: A-375

◢ SRX10131662: Bronchial tracheal epithelial cells

◢ SRX10131663: Bronchial tracheal epithelial cells

◢ SRX20436771: DLD-1

◢ SRX20436779: DLD-1

◢ SRX10715331: HCB1

◢ SRX10715344: HCB1

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◢ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX20230567: Ishikawa

◢ SRX20230568: Ishikawa

◢ SRX20230569: Ishikawa

◢ SRX20230570: Ishikawa

◢ SRX20230571: Ishikawa

◢ SRX20230572: Ishikawa

◢ SRX20230573: Ishikawa

◢ SRX20230574: Ishikawa

◢ SRX10144542: Kasumi-1

◢ SRX10144543: Kasumi-1

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX7366779: MCF-7

◢ SRX7366780: MCF-7

◢ SRX7366781: MCF-7

◢ SRX7366782: MCF-7

◢ SRX7366783: MCF-7

◢ SRX7366784: MCF-7

◢ SRX244177: MM.1S

◢ SRX244180: MM.1S

◢ SRX327758: MM.1S

◢ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◢ SRX1637467: MOLT-4

◣ SRX1637469: MOLT-4

◢ SRX1637470: MOLT-4

◢ SRX2375362: MV-4-11

◢ SRX2375366: MV-4-11

◢ SRX14127531: OCI-AML3

◢ SRX14127532: OCI-AML3

◢ SRX14127543: OCI-AML3

◢ SRX14127544: OCI-AML3

◢ SRX18455086: OCI-AML3

◢ SRX18455087: OCI-AML3

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◢ SRX4023329: T-47D

◢ SRX4023330: T-47D

◢ SRX728779: THP-1

◢ SRX728780: THP-1

◢ SRX9730732: THP-1

◢ SRX9730733: THP-1

◢ SRX9730734: THP-1

◢ SRX9730735: THP-1

◢ CDK9: STRING

CDCA3
TMEM115
IFRD2
FEM1A
TCEA2
CALR3
C19orf44
SMPD3
TSNAXIP1
RANBP10
BTRC
MRPL24
MMACHC
NUDCD1
PHB
CLPB
PRCC
AP2S1
ATP2C1
KBTBD6
C1orf159
ST3GAL2
KBTBD7
PI16
PNKD
AAMP
GSPT1
HHIP
PAFAH2
GTF2H4
PKIG
ING3
SCNM1
LYSMD1
MICOS13
HSD11B1L
CHMP4B
PHF12
SLC4A2
CDK5
CCDC146
ZFYVE1
WDPCP
MDH1
BANP
WDR74
AHCYL2
NPRL2
CYB561D2
HMBOX1
INTS9
BOD1
PPP1R16B
UBR2
C3orf86
PEMT
CALR
LZTFL1
PPRC1
MAD2L1BP
GTPBP2
SCAF1
TMEM11
PPP1R12C
CRTC2
LST1
ALDH1A2
ZNF331
CHCHD2
STAU2
ZNF225
IQGAP2
ZNF444
UNK
UBQLN4
LAMTOR2
ACTR1A
SUFU
VCPIP1
C8orf44-SGK3
H2AZ2
NTAN1
ITGA4
RBL1
KCTD9
CDCA2
CD1A
CXCR4
PHF13
CTU1
TMTC3
CEP290
VIPAS39
AHSA1
FXYD2
HECTD1
TSSC4
DSTYK
SLC35B4
C12orf57
PANK4
GATB
INVS
ERP44
MSL2
KMT2B
ZNF337
SHQ1
TLR9
EPHX2
SYMPK
FOXA3
VPS50
HEPACAM2
DCLK3
TIMM21
FBXO15
PSMF1
DDX23
NBEAL2
FBXO48
APLF
BIRC5
FAM193A
ZSCAN22
LARS1
DCAKD
NMT1
RIC8B
DUS3L
OR10T2
ARHGAP24
LAT
FBXL19
FBXO46
RANGAP1
GFUS
RGL4
PPP1R12B
MAP1LC3B2
ZNF595
ZNF718
ZFYVE19
DNAJC17
WNK1
LDLRAD4
RABAC1
KRTAP16-1
RHCG
FBXW11
N4BP2L2
MED23
RPS7
JOSD2
CCDC90B
ZNF500
C16orf91
MND1
NUF2
TNFAIP1
IFT20
GPKOW
UTP3
RAB37
ELOC
CCDC114
PRPF40B
BNIP3L
H6PD
TGM6
THYN1
ACAD8
MX2
ABCF2-H2BE1
ABCF2
CCM2
SOX6
C11orf58
LAIR1
TNFRSF4
GSK3A
RETNLB
SCRIB
TFEB
SNX17
EIF2B4
SSBP1
STK25
BUB1B
DFFA
SMARCAL1
SIRT2
NFKBIB
POLDIP3
CHCHD3
RPIA
BORCS7
HSPA13
COX7C
RFX8
CAPN15
ZNF165
ORMDL3
CDK8
SIRT4
TSC1
GFI1B
AP2M1
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
NSFL1C
PEX3
ADAT2
DESI2
PRRG2
NOSIP
ARHGEF3
SLC47A1
ZNF140
TRAF3IP3
PTCRA
ZNF354C
DEGS1
MRPS18C
HELQ
MYO1G
TMEM245
RTTN
ARHGAP4
ICAM2
SLC33A1
H4C12
TES
STAU1
ZNF335
FAM222A
MFAP4
ALG10B
RPGRIP1L
FTO
AURKAIP1
CLEC16A
NME1
ZNF230
MED15
ZNF354A
COPS4
CCP110
PTK2
SLA
PEX26
SMO
FASTKD1
TTI2
TMEM59
TCEANC2
GZMA
MRPL1
KRR1
IPO4
CDK5RAP1
EIF3F
NEIL3
TFPT
PRPF31
ADORA2A
HEMGN
ATXN7
CFAP20
INTS12
GSTCD
WDR87
SIPA1L3
MTF2
SF3A3
FIGNL2
COX16
RPS20
REPIN1
GPANK1
CSNK2B
PHF23
ATAD2
EPHA1
TTC13
ARV1
MKRN3
ZNF749
ASXL1
AQP3
ZNF133
FAM185A
TRAPPC3
TTC33
CCDC150
SNAPC3
WBP2
DYNC1I2
STAP1
ZNF56
ZNF408
ARHGAP1
NET1
CCAR2
TRIP4
RAB1A
RPP40
FAM228B
SF3B6
NDUFS7
SLC25A19
AKIRIN2
CD3E
ALG10
CCDC200
TMC8
TMEM101
SPC25
PTDSS2
RIPK4
ZBTB45
NFKBIZ
TLR6
ARHGEF18
EPSTI1
PLAAT5
PSMD11
TBC1D31
ZNF350
BRF2
CCNG2
ARHGAP9
MARS1
ZNF224
DUSP2
CHMP7
SNRPD3
GUCD1
BICD2
MAMSTR
NR1H2
CTDP1
NOP16
HIGD2A
CIC
ZMAT5
UQCR10
LCK
DBNDD1
ZNF354B
TMEM127
CIAO1
NUCB2
RPL18A
C19orf53
PPIP5K2
CLP1
NUDT13
ZNF226
PA2G4
REXO4
NOP14
GRK4
ASAP1
MYLK4
TLE4
TNPO3
CNOT4
BUB3
YIPF2
TIMM29
IDNK
CYB561
ENOX2
CIAO2A
RALGAPA2
MBNL1
TMEM229B
MTMR9
MEN1
SUPT4H1
ZNF652
DCP1A
ZNF169
RPS26
ZFYVE28
CFAP99
ZNF101
BPI
LTA4H
JRK
WDR24
ASNS
CLIC1
DFFB
CEP104
RPL23A
SUGP1
MAU2
H4C14
NUTF2
CENPT
SMUG1
ZSWIM9
LIG1
RPS13
MKNK1
USP48
ZCCHC8
KCNA2
STX18
RBM6
NUP107
DLC1
HIF1AN
FKBP5
RPL29
COPS7B
NDUFS3
KBTBD4
ZNF527
PDE6D
TOR1AIP1
ESCO2
S100A5
CDK5RAP2
MRPS31
ZNF548
LSG1
ZNF343
RPL27
TMEM258
FEN1
TCF7
GALK2
COPS2
VPS41
ADGRE2
MAX
TSC2
NTHL1
OSCAR
NDUFA3
H4C3
ATP5MF-PTCD1
ATP5MF
GFM2
HDAC7
TMEM41A
KCTD5
UBAC1
AGK
ZNF821
FAM168A
ETFDH
C4orf46
CLDND1
CYP2U1
MRPL30
MITD1
ZNF420
STING1
NIBAN3
MYL6B
SDE2
ZNF37A
TMEM102
MLEC
ZNF688
GTPBP3
FNDC11
FDPS
ATP2A3
ITGAL
RTEL1
LRRC29
DAAM1
TRAF7
C17orf75
PRKCI
LMNB2
ING4
RBBP5
ALKBH3
MICAL1
LYST
PANK3
AOAH
ZGPAT
ARFRP1
ITGB3BP
EFCAB7
RALBP1
AQR
GABPB2
USP30
CCNI
C16orf54
ZW10
MGRN1
RNF125
RAB30
PIGU
SLC39A3
LRRC1
DPY19L4
MRPL44
SNRPB
HEXIM2
FAM207A
ATP5F1D
SUPT7L
SLC4A1AP
CD2AP
ZC3HC1
GRAP2
CLTC
ARHGAP45
TOX
TOMM40
THEMIS
H4C15
PIH1D2
NKAPD1
NRDE2
AAR2
NDUFB3
FAM126B
PSD4
PNPLA6
TAB2
TBX6
RASAL3
PPP5D1
CALM3
SLC7A8
NCLN
IL21R
LETM1
RUVBL1
KBTBD8
MFSD3
VPREB1
RAB5C
VKORC1
TUT1
ZNF189
MRPL50
SLC26A11
CST7
C12orf43
CNIH4
DHX33
EMSY
MAIP1
NUMA1
LRTOMT
TMEM160
LTN1
LIN37
PPP2R5B
S100Z
NUP54
ARHGAP19
DRG2
RBM28
CASP8
ZNF570
ZNF569
RAB27B
DHX8
SOAT2
PUM3
ZSCAN5A
ABCB8
NUCB1
ZNF605
BMS1
KLHL20
KIF15
KIAA1143
GRHL3
HSCB
CHEK2
LOC388282
DCAF10
CFL1
SELENOH
THRAP3
MRPS23
SF3B5
PEAK1
HMG20A
LRP6
ZNF805
LAX1
TCF3
DGAT1
IQGAP3
ZCCHC4
TMEM199
POLDIP2
MTBP
MRPL13
ZNF451
ZNF277
DOCK4
SEC11C
ZNF175
APOBR
ATP5PO
CTF1
GPR137
SMG8
CCDC88B
EIF4A2
UBE3B
KCTD10
C1orf109
CDCA8
C15orf62
DMAP1
ZNF45
CXCR3
MRPS16
POLR3B
SVIP
ASCL4
TTC4
VRK1
TARBP2
STARD10
TERF2
TM9SF4
CD3D
WRNIP1
ZNF32
PTPN22
CUEDC1
SERPINI1
PDCD10
ZNF235
ANKRD40
RACGAP1
CWC22
TMEM123
TBL3
COMMD2
ZNF276
PTPRCAP
ARHGDIB
GAS7
GSTA4
TRAK2
STRADB
CDC14B
METTL7A
CALM2
TRMT6
MCM8
WDR83
WDR83OS
ANAPC5
SAMD3
UBL7
L3MBTL2
STAT1
UTRN
GOLGA3
SDCCAG8
CEP170
PPP1R13L
POLR1G
INO80B
ZNF419
MED11
DIABLO
ZC3H6
FAM8A1
TNFSF4
TRAF3IP2
UFSP2
GTSE1
RNASEH2C
BOLA1
SEC13
HSPH1
SNRPC
NEDD8-MDP1
NEDD8
GMPR2
TBC1D19
PIKFYVE
PRAF2
ZNF850
PHB2
HNRNPA1L2
OR10P1
TRAT1
TMEM143
SYNGR4
CDC6
MRPL3
SNAP47
JMJD4
B3GALNT2
LUC7L
HEMK1
PRDM1
AP1G1
PCM1
CASS4
TMEM222
TRUB2
COQ4
WDR46
PFDN6
PRSS23
UMODL1
TOP3B
STRA6
ASIP
ADAMTSL2
METTL18
C1orf112
IL17RE
FIS1
UBASH3A
EIF5B
TXNDC9
SETMAR
BUB1
MAF1
CCDC174
SKP2
LMBRD2
RUFY3
RPS6KB2
EXOSC4
SEL1L
HUS1
TRMT1L
SWT1
MB
EXO1
PES1
NKD1
MCAT
WASF1
CDC40
CPPED1
UTP11
NR1H3
ACP2
ITK
CCDC88A
METTL26
IL10RA
IRF8
CAND1
HBP1
MTERF4
COMMD9
SESN1
SLC25A51
CEP57L1
PLK1
TMEM94
H4C11
GTF2H2
ZMPSTE24
EVI5L
DARS2
CENPL
WRAP53
TP53
CSTF2T
NUP153
AGAP2
SCAND1
ZNF529
METTL17
H4C8
LRRC45
CENPX
IGF1
RPL22
MCM7
AP4M1
EIF3D
CEP97
PPME1
C2CD3
KCNN3
MC1R
CCDC77
TOR2A
GALM
NPY
LATS1
SEPTIN9
PGM2L1
NELFB
PPFIBP2
TACO1
RAD54L2
RAB29
EDC4
RPS19
WDR11
CCPG1
C15orf65
ETFB
EIF2D
AP2B1
MEF2C
ACOT7
KAT7
TMEM43
CHCHD4
RAD52
SCAMP4
ADAT3
ZNF302
CDK19
AMD1
YJU2
IZUMO1
DNAJB4
TUBGCP3
ZNF565
ZNF146
POLR2J3
MRPL16
CD28
TATDN3
NSL1
UBXN8
SLC32A1
ZSCAN32
ZNF174
ZNF227
DDX49
COPE
CNPY2
APH1A
PTRHD1
CENPO
VTA1
NMBR
CD48
PSMB6
BRWD1
METTL11B
GTF2H2C
GTF2H2C_2
GAD2
SLC24A1
SPHK2
RPL18
LRRC37A3
RNF220
VPS25
DNAH7
CAPN10
ZDHHC14
USP35
KCTD21
TMED9
ESPL1
TARS2
TTC26
PBXIP1
NOLC1
CXCR5
ZNF461
IST1
TAF3
TMEM33
IWS1
PALD1
ZBED4
GCSAML
MTRF1
ADARB1
ABLIM2
VPS37C
ZNF416
MRPL39
MRTO4
EMC1
QTRT2
CCDC191
SDHAF3
FAM163B
ANTKMT
NMNAT1
LZIC
MPHOSPH10
MCEE
MAPRE2
MMRN1
TIMM22
PSMD3
TMEM186
PMM2
SASS6
UBC
LAS1L
MORC3
EVL
REXO2
TIAL1
SUGCT
MPLKIP
CTHRC1
GPR68
POLRMT
LGALS2
LOC105370980
RPL8
HSPE1-MOB4
HSPE1
HSPD1
GBA
OGT
PMVK
TMEM109
H4C4
CCNL1
ZFPL1
CDCA5
VIRMA
EXOC4
HIRIP3
FOXP1
EIF1AD
BANF1
HMGB1
USPL1
TMEM242
VPS13B
UCHL5
RO60
SLX4IP
DPEP2
TCF12
USP15
MTIF2
KRI1
POU2AF1
ZNF384
RPS3A
ERAL1
TBC1D13
ZNF599
INTS5
SERBP1
SAP30BP
RECQL5
ZNF584
SSH2
ARHGAP30
CEP152
ARMH3
TPD52L2
SLC39A8
DOCK10
IPPK
KDM4D
CWC15
SLC39A13
TMED5
CCDC18
METTL3
ZNF473
VRK3
CKAP2L
MRPL48
ZER1
ERLIN2
ZCCHC3
DPF1
RGL2
MTR
POLK
CERT1
CLDN12
KMT2D
CWC25
TEFM
XRRA1
SPCS2
SNIP1
PPIL3
NIF3L1
RPLP2
THAP1
KLHDC10