ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX14127544 | OCI-AML3
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◢ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◢ SRX535453: A-375

◢ SRX535454: A-375

◢ SRX5501657: A-375

◢ SRX5501659: A-375

◢ SRX5501661: A-375

◢ SRX10131662: Bronchial tracheal epithelial cells

◢ SRX10131663: Bronchial tracheal epithelial cells

◢ SRX20436771: DLD-1

◢ SRX20436779: DLD-1

◢ SRX22001291: DLD-1

◢ SRX22001292: DLD-1

◢ SRX22001293: DLD-1

◢ SRX10715331: HCB1

◢ SRX10715344: HCB1

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◢ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX20230567: Ishikawa

◢ SRX20230568: Ishikawa

◢ SRX20230569: Ishikawa

◢ SRX20230570: Ishikawa

◢ SRX20230571: Ishikawa

◢ SRX20230572: Ishikawa

◢ SRX20230573: Ishikawa

◢ SRX20230574: Ishikawa

◢ SRX10144542: Kasumi-1

◢ SRX10144543: Kasumi-1

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX7366779: MCF-7

◢ SRX7366780: MCF-7

◢ SRX7366781: MCF-7

◢ SRX7366782: MCF-7

◢ SRX7366783: MCF-7

◢ SRX7366784: MCF-7

◢ SRX244177: MM.1S

◢ SRX244180: MM.1S

◢ SRX327758: MM.1S

◢ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◢ SRX1637467: MOLT-4

◢ SRX1637469: MOLT-4

◢ SRX1637470: MOLT-4

◢ SRX24723215: MRC-5

◢ SRX24723217: MRC-5

◢ SRX24723219: MRC-5

◢ SRX24723221: MRC-5

◢ SRX2375362: MV-4-11

◢ SRX2375366: MV-4-11

◢ SRX14127531: OCI-AML3

◢ SRX14127532: OCI-AML3

◢ SRX14127543: OCI-AML3

◣ SRX14127544: OCI-AML3

◢ SRX18455086: OCI-AML3

◢ SRX18455087: OCI-AML3

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◢ SRX4023329: T-47D

◢ SRX4023330: T-47D

◢ SRX728779: THP-1

◢ SRX728780: THP-1

◢ SRX9730732: THP-1

◢ SRX9730733: THP-1

◢ SRX9730734: THP-1

◢ SRX9730735: THP-1

◢ CDK9: STRING

H4C12
H4C14
H4C15
H4C11
H2BC21
H2AC20
H2AC21
EGR1
H2BC18
H3C13
H3C15
H3C14
H2AC19
H2AC18
FOS
H1-2
H2BC11
H2AC11
H2BC12
H2AC12
H1-4
H2BC5
H1-5
H2AC16
EIF4A1
MCL1
H3C2
DDX5
CEP95
H4C9
SRSF7
CKS2
FOSB
PTMA
H2BC4
H2AC6
H1-3
H4C8
H3C7
H2BC9
H2BC8
H2AC8
TRA2B
ATF4
H2BC17
H2AC17
ZBTB37
KLF7
DDX3X
MDM4
EEF1A1
ACTG1
H4C3
TUBA1B
TPI1
EIF5A
PPIA
H2BC13
H2AC13
UBC
EIF1
ACTB
H3-3B
GAPDH
TMSB4X
H4C5
CA2
ZBTB4
POLR2A
DDX21
NUCKS1
H2BC15
H2AC15
NPM1
CALM2
MAT2A
H4C6
SRSF2
MFSD11
FTL
PPP1R10
MRPS18B
UBAP2L
C1orf43
JUND
H4C1
H3C1
SLC39A10
MTHFD2
SFPQ
WDR74
H3C11
H4C13
FUS
H2BU1
H2AW
RCC1
CBX3
HNRNPA2B1
HNRNPU
GPX1
RRP12
H4C4
TAF1D
C11orf54
ZFP36
PABPC1
ZNFX1
HMGN2
JUNB
ZFP36L2
HNRNPA3
HSPA8
EFCAB2
EIF4A2
HNRNPH1
ANP32B
RPL23A
HIPK3
EEF2
ANP32E
TUBA1C
SLC38A2
SLC3A2
H3C4
H2BC7
H2AC7
RFX1
CXCL8
POLDIP3
H2AC4
ADPGK
RPL8
TFRC
HNRNPF
SUB1
ANKRD13D
ENO1
SRSF3
SRSF6
N4BP2
RPS2
CIRBP
BCLAF1
PMAIP1
H2BS1
KMT2E
NFYC
GABPB1
NCL
RBM39
PPIF
RPSA
SRSF5
P4HB
CITED2
ZCWPW2
AZI2
RPL10
RPS20
RPS19
HNRNPAB
TNF
XBP1
CNBP
C19orf48
PRDX1
EIF5
RPLP0
UCK2
YWHAZ
ODC1
TRIB1
H3-2
SNX16
BTG1
MBNL1
SF1
RPL13A
PCF11
NFE2L2
TRAF7
PCBP2
ETF1
RMI1
HNRNPK
TANK
UBE2S
HNRNPD
PFN1
TAGLN2
EIF4G1
SNX5
MGME1
CXCL1
RPL12
LRSAM1
RPL21
TASL
GSTA4
PDCD4
LDHA
DALRD3
NDUFAF3
TMBIM4
PSEN1
RPS23
ATP6AP1L
CFL1
PNP
KLF6
GTF2A1
APTX
DNAJA1
YBX1
SLC16A3
PPP1R15A
IRF2BP2
NKIRAS1
RPL15
CBX5
HNRNPA1
KPNA2
CLK1
ATAD2
RPS16
ZFAT
PABPC4
LUC7L2
SETD7
C12orf57
GLUL
TMEM267
JPT1
SIRT4
PCIF1
RPS8
MATR3
MTX1
THBS3
ZNF217
KLF2
YWHAG
PBLD
HNRNPH3
COQ2
WDR43
SLC7A1
CORO7-PAM16
CORO7
INO80
CEBPA
THBD
PCBP1
FASN
TPT1
CCT5
ATPSCKMT
TLK2
HSP90AB1
E2F3
GOLM2
RPL10A
ZWILCH
RPL4
CTBS
H2BC14
H2AC14
ARF4
LRRC37A3
LDLR
H4-16
EGR3
HDGF
RHEB
RPL22L1
HSPA4
NFKBIZ
DENND4B
REPIN1
TYMP
ODF3B
RPL13
AZIN1
UNKL
CYB561
EIF4A3
RPS13
BTF3
SLC7A5
DARS1
H4C2
GTF2I
FRAT1
MARCHF6
FAM43A
HSP90AA1
XPOT
CITED4
ZC3H4
CCNL1
SRCAP
LOC730183
TMPO
HMGB2
ZC3H6
RPL31
RPL27A
GPN3
FAM216A
S100A13
CHTOP
LSM8
SRGN
RPL37
RPS12
IVNS1ABP
MFSD3
ZBTB25
ZBTB1
NOP58
NME2
RFX3
MPC2
DCAF6
PTBP1
CSKMT
C11orf98
UBE2M
CCNI
RPLP2
GDI2
RPL17-C18orf32
RPL17
YWHAE
AZU1
HAGHL
CCDC78
RPL3
GPCPD1
HCFC1
DUSP2
H2AX
PHB2
ALDOA
ST7L
CAPZA1
ENOSF1
ZNF487
FABP5
RAI1
ASXL1
PAN3
HNRNPDL
ENOPH1
DLX1
RPL32
SMARCC1
TARS1
UBE2D3
SPAG7
ETV6
USP22
PRKAA1
PRCC
ING3
CDC25C
FAM53C
HERPUD1
YDJC
SRSF1
PTP4A1
ACTR2
IFRD1
RPS15A
RAB11FIP1
H2AZ1
H3C10
MORF4L1
CCT2
CDC42
ARHGDIA
RNH1
RPS6
PKM
HSP90B1
NDRG1
CTCF
S100A11
OPA1
MCM6
MBP
ZNF804A
ISOC2
LONRF1
ZC3H10
TOB1
RPL41
RPS27
CD164
ZFAND5
EEF1D
TIGD5
RCC2
JUN
LYN
SESN2
TTC30B
ACTR3
RBM3
NXF1
HNRNPL
ID1
MDM2
TXNRD1
MYLIP
GTF2IRD2B
SARAF
NDUFS1
EEF1B2
KNTC1
JADE1
RPL29
SDE2
CREBZF
B2M
ELK4
GTF3C6
SLC22A4
ERLIN2
GTPBP4
PUF60
DDX59
ZNF787
TSC22D3
ERCC1
LYST
FOXP1
RELT
NFKB1
OGFRL1
ATP2A2
IL6R
TRPM2
TOB2
RPLP1
STYXL1
MDH2
ATAD2B
SCAF8
EBAG9
ZNF207
BCOR
H3C12
ZNF335
RPL7A
MED22
RPL28
SYNCRIP
PAIP1
TNFSF9
HSPE1-MOB4
HSPE1
HSPD1
ID2
USF1
SMARCE1
ZNF131
CHD1
BHLHE40
ZNF124
SNRPB
EZH2
EP300
MKNK2
BACH1
STAG1
NASP
BPTF
ST3GAL1
MEF2D
ETS2
STAG2
PNN
SINHCAF
ELOC
EIF4G2
FTH1
DUSP1
IL17RA
PPDPF
KEAP1
RPL24
TMX4
MCM7
AP4M1
SNRPD1
ILF3
HIPK1
BAZ2B
ANKRD18B
TIMP3
PPRC1
FMC1-LUC7L2
FMC1
TRIM27
WDR49
RBM14-RBM4
RBM14
SETD5
DDX19B
AARS1
GGNBP2
INTS6
DOT1L
OSBPL1A
CXCR4
KATNAL2
PIAS2
SNTB1
HSPA5
RBMX
PPP2R2A
UNK
RPS3
LONP1
CATSPERD
PPP1R15B
CAPZA2
ARIH1
ATP6V0C
TBC1D5
PRMT1
NPEPL1
YTHDF3
CFLAR
RGL2
RAN
MAPK1IP1L
SLTM
DHX9
SLC25A33
TAF4
HMGB1
DDIT4
IPO7
GOLPH3
ITGA4
POLR2J3
RPS26
CAP1
ING5
RNF138
DNAAF2
CEBPB
CYCS
EIF3A
XPO6
FOSL1
MICOS10-NBL1
MICOS10
INO80D
ANXA2R
CENPA
HMGA1
KIF27
RPL6
GADD45B
PABPN1
SLC25A13
FBXL17
TBL1XR1
CCDC85B
MRPL3
NUFIP2
ADIPOR2
RHBDD3
EWSR1
CDK12
RRM2
ATG16L2
EIF3E
PHF19
STMN1
EIF4E
CSDE1
CTNNB1
KANSL1
SRSF4
DHX15
LIG3
ZNF766
CDV3
ATP2B1
TXN
GMEB1
EXOSC4
NACA
NSMAF
LAT
RPL18A
WDR6
GRPEL1
ERAP1
ZAR1L
BRCA2
HNRNPC
MICAL1
CCL5
BANP
CTPS1
BZW1
NIPBL
WDR1
RNF169
BAZ1A
HSF1
BOP1
RPL5
COX20
MAN1B1
CEP350
AKAP8
TCERG1
TIGD1
EIF4E2
DDX17
SRF
PPP1R27
NOP56
H1-10
DYRK1A
RBM12B
ARHGAP26
INSIG1
PAK2
DBI
C2orf76
RPS27A
CLHC1
APOLD1
SMIM19
SLC20A2
UHRF2
C9orf40
STRN3
AP4S1
SPRY2
UBB
VCP
WDR4
EIF4B
PRDM10
DNAJB4
MED31
C17orf100
RNASEH2B
E2F5
FUBP1
CPQ
ADGRE5
EDEM1
NUP153
DUS3L
SSU72
RAB7A
RPL35
ARPC5L
ZNF24
MIDEAS
PIGW
MYO19
YBX3
ELANE
CALM1
GABPA
ATP5PF
NNT
NFIL3
RPL37A
ZFX
ZMYND11
WDR25
WARS1
LIN9
GRB2
ARIH2
SREBF1
C16orf54
OAZ1
NOCT
NRF1
FAM83D
ZYX
LAPTM5
HNRNPUL1
KDM3B
NAP1L1
FAIM
SIK3
HSPA9
NUDT4B
NUDT4
TCTA
RHOA
TUBB
ZNF532
CRIP1
SERBP1
RBM12
CPNE1
RPS9
VMP1
PTRH2
ZNF22
GNB1
RUNX1
RAD23B
RPL7
NABP1
SEC63
SBNO1
TRA2A
LRIF1
IQGAP1
PPP3R1
NUDT19
PHF10
SPI1
SRRM2
DUSP28
ANKMY1
HNRNPR
AHRR
TFAP4
SLC22A15
GBE1
PCBD2
CFD
SUSD1
ZBTB2
KMT5B
NBN
COQ8A
SLC25A32
DCAF13
CSNK1D
HK2
DYNLL1
ELF2
C5orf24
SRSF9
DDX39B
LMNA
TFAM
TNFRSF10B
FLT3
PTPN6
ARPC3
RACK1
ZBTB11
TADA3
ARPC4-TTLL3
ARPC4
MED17
RNF135
VEGFA
MEPCE
ZCWPW1
SERPINB8
SFMBT2
ARSD
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
DDX23
MTF2
IFRD2
HEXIM2
LAMP1
CLTC
FEM1A
TBL3
DSTYK
COPS7B
EIF2D
CALR3
C19orf44
CDCA3
TMEM41A
STX18
TIMM21
FBXO15
BRWD1
MRPL21
IGHMBP2
NCBP2AS2
NCBP2
ABCF2-H2BE1
ABCF2
DCP1A
NOTCH2
PPP5D1
CALM3
TSNAXIP1
RANBP10
PAFAH2
GSPT1
TMEM11
SOD2
WTAP
TMEM199
POLDIP2
WDR53
FBXO45
TMEM222
SPATC1L
GATB
FOXJ3
CLPB
SSNA1
ANAPC2
RBL1
CCDC88A
TSN
NDUFS7
TOMM22
SPNS1
SEC13
MRM3
LRP6
GLOD4
AURKAIP1
ZSCAN22
MRTO4
EMC1
ORMDL3
TCF3
COPS8
KBTBD7
NDUFS3
KBTBD4
NMNAT1
LZIC
TIMM22
CCDC77
STX16
NUP214
SMN2
SMN1
BTRC
CNOT1
PEMT
TMEM115
KMT2D
MED23
DOHH
CFAP410
TRIP4
C16orf91
POMZP3
ZNF337
KPNB1
SCAF1
SYMPK
CHMP4B
ST3GAL2
CTDP1
MTERF4
BOD1
AP2S1
IST1
WASHC2C
TSSC4
PSMD3
PEX3
ADAT2
FOXA3
CDKL3
AHCYL2
PNKD
SNX17
EIF2B4
AAMP
TSC1
GFI1B
HTRA2
PA2G4
GTF2H3
EIF2B1
PHIP
TCEA2
FRA10AC1
HEXA
ZNF212
WASHC2A
SMPD3
PEX26
CLEC16A
NUF2
NAGPA
THRAP3
KCTD9
CDCA2
MRPL24
KBTBD6
RPL22
UBE2B
USP30
ZFAND2A
KDM5A
NUDCD1
TTC13
ARV1
TRIAP1
ZCCHC4
PPP1R12B
ZKSCAN2
ZNF721
PIGG
MED15
ATP5MF-PTCD1
ATP5MF
RPS6KB2
ZBTB45
RPS28
NDUFA7
ATG14
OSCAR
NDUFA3
MAF1
FAM207A
USPL1
SLC9A1
CRTC2
SCNM1
LYSMD1
INVS
ERP44
IPO11
TMEM127
CIAO1
OAZ3
KCTD5
MAD2L1BP
MICOS13
HSD11B1L
SCRIB
C8orf33
RPIA
PANK4
ZNF444
GTPBP2
NPRL2
CYB561D2
WDPCP
NOP14
MDH1
GRK4
GPAM
MAIP1
PPP1R12C
DNAJC11
DIP2A
DUS2
DDX28
TMTC3
CEP290
TRAPPC3
ZW10
CCAR2
CYP51A1
TNFAIP1
IFT20
PHB
BRIX1
SLC35B4
MAPKAPK5
ZNF384
RANGAP1
ATXN2L
UBR2
ALKBH3
C1orf159
MXD4
SRSF11
SMG5
RBM42
NME1
UBQLN1
LRRC29
MRPS15
TBRG4
CUL4A
ZNF56
RLF
PSMF1
PGBD4
EMC7
KAT7