ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX728780 | THP-1
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◢ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◢ SRX535453: A-375

◢ SRX535454: A-375

◢ SRX5501657: A-375

◢ SRX5501659: A-375

◢ SRX5501661: A-375

◢ SRX10131662: Bronchial tracheal epithelial cells

◢ SRX10131663: Bronchial tracheal epithelial cells

◢ SRX20436771: DLD-1

◢ SRX20436779: DLD-1

◢ SRX22001291: DLD-1

◢ SRX22001292: DLD-1

◢ SRX22001293: DLD-1

◢ SRX10715331: HCB1

◢ SRX10715344: HCB1

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◢ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX20230567: Ishikawa

◢ SRX20230568: Ishikawa

◢ SRX20230569: Ishikawa

◢ SRX20230570: Ishikawa

◢ SRX20230571: Ishikawa

◢ SRX20230572: Ishikawa

◢ SRX20230573: Ishikawa

◢ SRX20230574: Ishikawa

◢ SRX10144542: Kasumi-1

◢ SRX10144543: Kasumi-1

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX7366779: MCF-7

◢ SRX7366780: MCF-7

◢ SRX7366781: MCF-7

◢ SRX7366782: MCF-7

◢ SRX7366783: MCF-7

◢ SRX7366784: MCF-7

◢ SRX244177: MM.1S

◢ SRX244180: MM.1S

◢ SRX327758: MM.1S

◢ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◢ SRX1637467: MOLT-4

◢ SRX1637469: MOLT-4

◢ SRX1637470: MOLT-4

◢ SRX24723215: MRC-5

◢ SRX24723217: MRC-5

◢ SRX24723219: MRC-5

◢ SRX24723221: MRC-5

◢ SRX2375362: MV-4-11

◢ SRX2375366: MV-4-11

◢ SRX14127531: OCI-AML3

◢ SRX14127532: OCI-AML3

◢ SRX14127543: OCI-AML3

◢ SRX14127544: OCI-AML3

◢ SRX18455086: OCI-AML3

◢ SRX18455087: OCI-AML3

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◢ SRX4023329: T-47D

◢ SRX4023330: T-47D

◢ SRX728779: THP-1

◣ SRX728780: THP-1

◢ SRX9730732: THP-1

◢ SRX9730733: THP-1

◢ SRX9730734: THP-1

◢ SRX9730735: THP-1

◢ CDK9: STRING

DCAF12
RLF
CCAR2
ZNF684
IPPK
EXO5
ZMPSTE24
CD33
CAP1
ZFP69B
SCNM1
LYSMD1
GRPEL2
MTMR9
LAMP1
ALOX5AP
SH3BP2
CAB39
ITGB2
RPS19
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
WDFY3
LGALS8
NFYC
NLRP12
ITGAM
RXRA
NCF2
NCF1
PNP
STEAP4
PGA3
WDR74
SNRNP200
FAF1
PGK1
VTA1
NMBR
SPATC1
ZFP69
PPT1
TSSC4
HAUS6
HBS1L
CD244
ABT1
MTF2
ARHGAP30
EXOSC3
SETDB1
PGA5
MRPS18C
HELQ
TRIT1
SP110
IPCEF1
RMND1
ARMT1
FCER1G
RASA1
NUTM1
NOP10
PGA4
MRPL24
TMEM154
ARPC3
PPIH
SNAPC3
CCDC200
IL16
RMDN1
PDLIM2
SASS6
ZNF408
ARHGAP1
IFRD2
NUF2
RNF149
NDFIP2
MTPN
LUZP6
POMP
UBR7
GON7
MFSD2A
RNPEP
VCPIP1
C8orf44-SGK3
THYN1
ACAD8
SREK1IP1
CWC27
CARD8
CMTR1
HIBCH
FAM207A
MIA3
ARPC2
TLE4
SMAP2
NIP7
COG8
SRSF11
LRRC40
SLC25A32
DCAF13
DISC1
ATP5MPL
RPL37
FOXJ3
ZNF410
HEATR1
MMACHC
CBWD5
CBWD3
FEM1A
TIGD4
ARFIP1
VPS33B
PPP1R12C
RWDD1
PTK2B
TRIM35
CEACAM21
ATG5
UBAP2L
C1orf43
EIF2D
UBAP1
STK4
EIF3D
URM1
YES1
TFB2M
CNST
CUL7
EPRS1
KHDRBS1
SELENOH
MEFV
ZNF484
NIBAN3
HMBOX1
INTS9
DCP1A
CHMP4B
RUBCNL
OAS3
MRPS31
TTC14
UBXN8
TNFAIP8L2-SCNM1
TNFAIP8L2
TMEM59
TCEANC2
RTF2
MOB4
TMEM30A
USF1
UCHL5
RO60
DOCK8
HMGB1
USPL1
TNFAIP1
IFT20
TIPRL
TMEM127
CIAO1
TOMM20
WDR55
DGAT1
WDR70
TGFBR2
TIMM21
FBXO15
MDM4
PEX12
PISD
MED18
ZNF197
DCAF10
GTF2H2
LST1
TPRKB
EXOSC4
XRCC5
SIGLECL1
FPR1
ATP6V1C1
TTC13
ARV1
SIGLEC11
RPL8
HARS2
HARS1
INPP4B
WDPCP
MDH1
MTRNR2L8
STK36
RNF25
KIFAP3
UTP3
ZNF696
CLIC5
MYBL1
NOTCH2
NECAP2
IFNGR1
KBTBD6
ARHGEF1
CD1A
C4orf3
RGL1
ARPC5
OSCAR
NDUFA3
SCAF11
TBL3
C6orf89
NOXA1
CCL2
NFKBIL1
ATP6V1G2
RTCA
SLC33A1
ADPRS
PRPF3
PDCD2
TLE6
CTSG
CCT8
RCHY1
UBLCP1
VPS25
FCAMR
NDUFS3
KBTBD4
TCF12
EIF2B3
P3H1
AOPEP
MTRNR2L2
SNX19
NOL11
DR1
RNF141
MRPS23
ASXL2
ZNF622
RRS1
FKBP1A
PKD2L2
ATG16L1
PIGM
NSUN5
AKR1A1
WNT2B
FUCA1
RAC2
PEX3
ADAT2
PPP1R12B
CBWD6
CBWD1
HAX1
ZFYVE1
SDHAF3
N4BP2L2
SCAF1
ACAD9
PSMD7
OTUD7B
SDCCAG8
CEP170
APPL2
TADA1
SF3B1
ARHGEF12
CHCHD5
GOLGA7
TRIP4
B3GALNT2
TPK1
E2F4
GOLGA5
SLC35B4
WDR61
AGGF1
TMEM186
PMM2
GOSR1
DENND4B
TCTEX1D1
PIGU
PIKFYVE
STAU1
FAM120B
SLC24A1
TAF11
PDPR
CSF2RB
LRRC46
C1orf74
TATDN1
NDUFB9
PHACTR4
RALB
CCNL1
CEP350
FBXO46
THAP12
GVQW3
UCK1
ZNF780A
SNX3
GSPT1
ZNF56
ZNF142
BCS1L
ACVRL1
OPA1
ZNF337
IBA57
PIGBOS1
PIGB
PA2G4
TERF2
IPO8
THOC3
GALK2
NFX1
COPS2
PRKAB1
SNRPC
XRN2
TOR4A
NOB1
NME7
BLZF1
LOC100289561
TLE1
ZNF331
FAM227B
DTWD1
TBPL1
FITM2
STARD6
C18orf54
RPS6KA1
THOC5
ARHGAP25
CLPP
PACC1
RPL27
TAF12
SLC22A16
GTPBP10
KBTBD7
SRSF4
MTMR14
BRIX1
DUSP6
ITGAL
PHB
UBL7
DESI2
RAD50
GPR68
ATP5PO
PICALM
DNAJC16
MAN1B1
S100A2
MRPL17
HDDC2
WIPF2
RPL37A
YKT6
HK3
SYMPK
FOXA3
HSPA13
KATNBL1
GET4
CFAP298-TCP10L
CFAP298
IRAK1BP1
LILRA2
PGBD4
EMC7
JOSD2
RANBP3
TPM3
NOL6
INTS1
UBR1
ELOF1
C22orf34
CIAO3
CITED4
AP2B1
ZNF668
ZNF646
DYNC2H1
TSN
TOR1AIP1
CCDC149
CRTC2
DBI
C2orf76
PDF
NAPG
PPCDC
NLRP3
MED10
TPT1
CXXC1
LAMTOR5
TAF13
RAB1A
HUS1
RRM1
NUP58
CCDC30
ZMYND12
PPCS
AHCTF1
SLC31A1
FKBP15
GLI4
SSNA1
ANAPC2
TRIM41
TLN1
CREB3
WDFY2
SPG11
MRFAP1
NCSTN
COPA
IL7R
ORMDL3
LYPLAL1
APH1A
TOMM6
GUK1
COPB1
ZNF697
OAS2
OCSTAMP
CALR3
C19orf44
TMEM39A
VPS26C
NR3C1
NUP133
ANXA2R
BOLA1
SF3A3
RPS16
RGPD2
RGPD1
SLC37A4
TBC1D23
PUM1
GOPC
ADAM10
KCTD5
ADSS2
MDN1
SF3B5
CCDC114
RNF14
ACP3
CCL22
TMX1
GTF2B
MEF2C
RPIA
ZW10
BOD1L1
GTF2H2C_2
GTF2H2C
SIGLEC6
CEACAM4
ATG7
ERMARD
ZCWPW2
AZI2
MTFR1
ZNF614
PPME1
C2CD3
MRPS35
RPL5
MLKL
VCPKMT
PARVB
RPL29
PPP2CB
IL1RN
SNX17
EIF2B4
OBI1
BOD1
TRAPPC4
RPS25
ADAM17
DNAJC10
CNOT1
NUP155
SEC14L1
TRMT11
CTU1
MRPL55
MTMR6
RSL24D1
LAPTM5
SART1
SH2B1
TUFM
SNAPC5
PUM3
ETNK1
GNPAT
C1orf131
SLC1A5
CUTA
DNAH14
GIMAP8
COPS8
MED23
XRRA1
SPCS2
SRP9
SKP2
LMBRD2
CHMP7
CSNK1A1
USP3
FIGNL2
CTDP1
CLEC16A
SRPRA
CATSPERE
CTNNB1
RPL36
RPL22
NUDCD1
SNAP47
JMJD4
MED4
ZNF350
GZF1
ABCA3
CCDC146
DHDDS
KIF15
KIAA1143
OCIAD1
ZNF221
CHMP5
BAG1
RAB44
ZC3H6
ZNF175
RPS20
LTN1
UBE2V1
TNNI2
USP15
DCPS
IL6R
MRPL44
RPL11
ARID2
TRIM37
EMC8
COX4I1
CCL4L2
NKIRAS1
RPL15
DDX41
RC3H2
TRIP11
EEF1AKNMT
EIF6
RIC8B
MEN1
RNF216
HIGD2B
BBS4
GTF2E2
VIRMA
PNPLA6
GGPS1
ARID4B
LRRC29
KIAA1586
NDUFC1
NAA15
ZNF12
ZNF318
SYK
TRIAP1
ABCD3
CTTN
EFHC1
PTK6
PCBP2
PRRG2
NOSIP
CD53
CRBN
IPO13
LTA4H
ORC5
AHI1
S100A9
EDEM3
SLC44A1
LATS1
ZNF397
YWHAB
PPP1R11
PSMA6
INPP5D
CGAS
LILRB4
ZNF567
RPL38
ZNF354B
UTP23
CTR9
TRIM25
NBR1
TESK1
TLR4
FRG1
MAGEF1
LYNX1-SLURP2
LYNX1
NCKAP1L
PPP6C
LONP2
ABCC11
POLN
HAUS3
KIF2C
ATP2B4
SEC13
THRAP3
BRF2
NDUFS2
INTS12
GSTCD
ZNF230
GHRL
MCOLN1
EED
CNPY3
SMIM26
TOMM7
YTHDF1
DAB2
APOL2
FAM185A
MRPL49
FAU
ZNF354C
NSMCE3
WDR36
ST7L
CAPZA1
AGT
MAD2L1BP
GTPBP2
ERI1
TAF1B
SGO2
NDUFAF6
NCF4
NCBP2AS2
NCBP2
SSBP1
DUS3L
VKORC1
SPRTN
EXOC8
LIN54
POM121
TCHP
IFITM2
DDX23
RPS7
SKIV2L
NELFE
ZNF549
ABCB10
RNF139
ZC3HAV1
SAMD4B
COX7A2
AP3B1
AVIL
ZNF212
GBA
SNU13
PTTG1IP
LILRA1
ZNF225
CNIH4
ERLIN2
DNTTIP2
KATNA1
SRBD1
BHLHE40
OAS1
RRP15
GABPA
ATP5PF
MRPL45
FAM200B
TRIM46
KRTCAP2
ICAM1
SLA
UFL1
PSMB1
TBP
TRMT61B
FBXO28
PKN2
KLHL20
ZNF658
GNAI3
DHX15
TNFSF10
HMGCL
TPR
ODR4
MAK16
SLC30A7
SHPRH
TMTC3
CEP290
ZNF189
MRPL50
MRPL16
CDK19
AMD1
MTERF1
DAXX
CDC42
PROS1
NAPB
CEP63
ANAPC13
NPRL3
RPL6
LTO1
DEDD
PPIP5K2
TCTEX1D2
TMED4
TRAF3IP3
OSBPL7
TM6SF1
TOMM22
ZNF721
PIGG
UBE2Q1
NDUFAB1
ZC3H11A
PPIL4
SUCO
ALG10B
EXOSC6
TNPO1
PSMD9
HPD
STAT2
LYPLA2
FAM32A
TMEM222
PPP1R8
UNC50
COA5
CHEK1
MED20
BYSL
GON4L
TEP1
NDUFV1
ALG10
WFDC3
DNTTIP1
WDFY1
ITGB1BP1
CPSF3
MICOS13
HSD11B1L
WASHC5
NSMCE2
POLR3E
HNRNPU
WDR7
MED15
SPHK2
RPL18
TMEM248
TIGD1
EIF4E2
UQCRC1
DDX18
MRPS10
MINDY2
PIGC
DHX34
CCDC150
RAB3C
KIZ
SNRPD3
GUCD1
HINT1
MINDY3
NBPF1
ZNF398
ZNF425
MIDEAS
KIF22
NUDT9
PPP2CA
GIT2
BCL2A1
FBXW2
ASB6
ZNF134
ISY1-RAB43
ISY1
FCHO2
SIGLEC14
MFN2
TTC33
DCAF8
BRMS1
CTNNBL1
CCPG1
C15orf65
ORC4
MBD5
TBRG4
SLC7A6OS
PRMT7
SESN1
TOR1A
LUC7L2
NBN
ZNF224
SDHAF2
CPSF7
CEP57L1
FMC1-LUC7L2
FMC1
SMIM15
IKBIP
APAF1
PRCC
RBM6
RBM15B
KDM1A
PRKCSH
CCDC151
POLI
PEX6
SKAP2
EIF2S2
EIF1
QTRT2
CCDC191
CDK4
ATP9B
SDHB
FBXO38
TAB1
LSM2
DCLRE1B
AP4B1
MAPKAP1
NIPBL
PARP10
ABCF2-H2BE1
ABCF2
TATDN3
NSL1
ZNF226
IPP
ANGEL1
IMPA1
WDR53
FBXO45
ATP5MF-PTCD1
ATP5MF
U2AF1L5
U2AF1
TMED5
CCDC18
ATP6V0B
EIF4ENIF1
PPP1R12A
PKD1
GTF2H3
EIF2B1
SEC31A
NUP42
SRSF5
PHF1
RBM34
PSMC1
IFTAP
AP2S1
NXF1
ARHGAP9
MARS1
SDE2
LARS2
TKFC
DDB1
TRAPPC8
METTL18
C1orf112
SNUPN
TCTN1
OTUD6B
CCDC15
CKS2
TIGD6
HMGXB3
TMEM43
CHCHD4
DMAP1
ETFDH
C4orf46
ATP5MC2
MIER1
DNAI4
TNFRSF10A
ALKBH3
NOC4L
DDX51
CFL1
USE1
RBBP5
TRMT6
MCM8
RAB18
S100A13
CHTOP
RBM45
VRK2
BAX
VPS13C
SCML1
BATF2
TRMT2A
RANBP1
ERO1B
ZNF268
ZNF669
RAB10
ATXN7L1
PHF13
ZNF148
MKS1
RPAP3
VGLL4
CRB1
SLFN13
TEFM
PGM2
ADSL
REPS1
RABIF
TOP3B
PCM1
MED27
TMEM68
TGS1
DHX8
PPP1R15B
KIFC1
TMUB2
POLR1E
MAP2K7
STPG2
MESP1