ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1637467 | MOLT-4
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◢ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◢ SRX535453: A-375

◢ SRX535454: A-375

◢ SRX5501657: A-375

◢ SRX5501659: A-375

◢ SRX5501661: A-375

◢ SRX10131662: Bronchial tracheal epithelial cells

◢ SRX10131663: Bronchial tracheal epithelial cells

◢ SRX20436771: DLD-1

◢ SRX20436779: DLD-1

◢ SRX10715331: HCB1

◢ SRX10715344: HCB1

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◢ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX20230567: Ishikawa

◢ SRX20230568: Ishikawa

◢ SRX20230569: Ishikawa

◢ SRX20230570: Ishikawa

◢ SRX20230571: Ishikawa

◢ SRX20230572: Ishikawa

◢ SRX20230573: Ishikawa

◢ SRX20230574: Ishikawa

◢ SRX10144542: Kasumi-1

◢ SRX10144543: Kasumi-1

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX7366779: MCF-7

◢ SRX7366780: MCF-7

◢ SRX7366781: MCF-7

◢ SRX7366782: MCF-7

◢ SRX7366783: MCF-7

◢ SRX7366784: MCF-7

◢ SRX244177: MM.1S

◢ SRX244180: MM.1S

◢ SRX327758: MM.1S

◢ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◣ SRX1637467: MOLT-4

◢ SRX1637469: MOLT-4

◢ SRX1637470: MOLT-4

◢ SRX2375362: MV-4-11

◢ SRX2375366: MV-4-11

◢ SRX14127531: OCI-AML3

◢ SRX14127532: OCI-AML3

◢ SRX14127543: OCI-AML3

◢ SRX14127544: OCI-AML3

◢ SRX18455086: OCI-AML3

◢ SRX18455087: OCI-AML3

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◢ SRX4023329: T-47D

◢ SRX4023330: T-47D

◢ SRX728779: THP-1

◢ SRX728780: THP-1

◢ SRX9730732: THP-1

◢ SRX9730733: THP-1

◢ SRX9730734: THP-1

◢ SRX9730735: THP-1

◢ CDK9: STRING

CDCA3
BTRC
IFRD2
TCEA2
MMACHC
CLPB
TSNAXIP1
RANBP10
TMEM115
AP2S1
SMPD3
GTF2H4
FEM1A
PRCC
WDPCP
MDH1
CHMP4B
CALR3
C19orf44
NUDCD1
GSPT1
MRPL24
ZFYVE1
ST3GAL2
PKIG
PEMT
PNKD
AAMP
MICOS13
HSD11B1L
WDR74
PHB
SCNM1
LYSMD1
BANP
C1orf159
CRTC2
KBTBD6
AHCYL2
TMEM11
SLC4A2
CDK5
PPRC1
ALDH1A2
ZNF444
RBL1
ATP2C1
PI16
PAFAH2
KBTBD7
BOD1
MAD2L1BP
GTPBP2
PHF12
PPP1R16B
VCPIP1
C8orf44-SGK3
HMBOX1
INTS9
TMTC3
CEP290
ING3
HHIP
STAU2
DCLK3
IQGAP2
CALR
KMT2B
DSTYK
SHQ1
PANK4
SLC35B4
BNIP3L
NPRL2
CYB561D2
INVS
ERP44
PPP1R12C
BIRC5
SCAF1
PPP1R12B
UNK
KCTD9
CDCA2
FBXL19
CCDC114
CHCHD2
WNK1
DEGS1
GATB
TSSC4
SSBP1
ZNF595
UBR2
POLDIP3
LARS1
NTAN1
FBXW11
C3orf86
GFUS
KRTAP16-1
CCDC146
ZNF225
MND1
FBXO48
APLF
TIMM21
FBXO15
ZNF331
VPS50
HEPACAM2
CAPN15
FASTKD1
CTU1
PSMF1
COPS4
ZFYVE19
DNAJC17
LST1
UBQLN4
LAMTOR2
ACTR1A
SUFU
ZNF335
NBEAL2
H2AZ2
FAM222A
CCP110
VIPAS39
AHSA1
TGM6
RANGAP1
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
RPS7
GSK3A
C12orf57
CCAR2
BUB1B
TNFAIP1
IFT20
CXCR4
NSFL1C
TFEB
PHF13
RAB37
MED23
STAU1
JOSD2
FXYD2
LZTFL1
RIC8B
GZMA
DFFA
GPKOW
MAP1LC3B2
ABCF2-H2BE1
ABCF2
ZNF337
SYMPK
FOXA3
ZSCAN22
DCAKD
NMT1
SOX6
C11orf58
MSL2
EPHX2
ZNF354A
TLR9
MX2
ELOC
CCM2
AP2M1
CD1A
WDR24
STK25
COX7C
DDX23
FAM193A
LAT
RPGRIP1L
FTO
CLEC16A
TFPT
PRPF31
DYNC1I2
ZNF133
RPL29
SIRT4
HSPA13
DCP1A
SLC47A1
CHCHD3
TMEM59
TCEANC2
DLC1
LDLRAD4
TTI2
RABAC1
RFX8
MRPL1
NUF2
CCDC90B
ZNF821
NEIL3
ZBTB45
PLAAT5
CDK8
PRRG2
NOSIP
RHCG
UTP3
H6PD
N4BP2L2
SLC33A1
PSMD11
ARHGAP9
MARS1
NDUFS7
ARHGAP24
EPHA1
NUDT13
TES
DUS3L
ITGA4
NET1
SNX17
EIF2B4
TMEM127
CIAO1
LYST
MTF2
HEMGN
DESI2
PEX3
ADAT2
DBNDD1
FAM185A
ATXN7
HECTD1
NDUFS3
KBTBD4
ORMDL3
PTDSS2
TNPO3
SNAPC3
THYN1
ACAD8
SLA
AURKAIP1
TTC13
ARV1
RPIA
ZNF500
C19orf53
MRPS31
RETNLB
CCNG2
TMEM245
SMARCAL1
IPO4
REPIN1
TOR1AIP1
BUB3
FBXO46
ZNF165
AAR2
PLK1
FIGNL2
PEX26
ASXL1
ATAD2
ZSCAN5A
DHX33
SNRPD3
GUCD1
NME1
TSC2
NTHL1
RAB1A
FAM228B
SF3B6
TSC1
GFI1B
RGL4
MRPL44
TLR6
SIRT2
NFKBIB
ZW10
ZMAT5
UQCR10
BICD2
TNFRSF4
CCDC150
RBM6
PHF23
LAIR1
CDK5RAP1
TBX6
BORCS7
INTS12
GSTCD
STAP1
SPC25
TTC33
IDNK
MED15
PANK3
REXO4
CDK5RAP2
GFM2
STARD10
AOAH
RALGAPA2
C16orf91
ZNF354C
CFAP20
WDR87
SIPA1L3
SF3A3
USP48
UBAC1
FAM168A
ZNF343
RAB5C
TMEM222
LCK
MFAP4
SCRIB
ZNF56
NCLN
TLE4
NOP14
GRK4
MBNL1
PEAK1
HMG20A
KCNA2
PTCRA
CYB561
ZCCHC8
PRPF40B
RIPK4
TRAPPC3
CCNI
LETM1
ZGPAT
ARFRP1
MEN1
THRAP3
PRKCI
PTK2
RTEL1
KLHL20
EPSTI1
TMEM160
ZNF749
ICAM2
DPY19L4
RBBP5
ZNF354B
ARHGEF3
MYO1G
ZFYVE28
CFAP99
AQP3
NR1H2
COPS7B
PDE6D
PIGU
TMEM143
SYNGR4
PNPLA6
TMEM102
CWC22
TRIP4
C17orf75
FAM207A
ZSWIM9
LIG1
ZNF140
ZNF101
CASS4
VPS25
MYLK4
RPS20
USP30
NIBAN3
MAIP1
WBP2
WDR36
RBM28
H4C12
TMEM258
FEN1
RPL18A
ZNF230
OR10T2
CLDND1
BRF2
BOLA1
RPS13
TACO1
TCF3
CNOT4
PRDM1
NUTF2
CENPT
GALK2
COPS2
SUPT7L
SLC4A1AP
TRAT1
JRK
ZNF408
ARHGAP1
SMO
MRPL30
MITD1
ZNF169
NUMA1
LRTOMT
TRAF3IP3
ZNF527
EIF3F
GPANK1
CSNK2B
SNRPB
CIAO2A
TRAF7
DGAT1
RPS26
MAMSTR
KRR1
COMMD2
CLTC
KCTD5
ASAP1
NUCB2
MZB1
RUVBL1
ADARB1
TMEM101
SDHAF3
ARMH3
ADORA2A
AGK
YJU2
MRPL39
C12orf43
LTA4H
ALG10
NFKBIZ
PA2G4
ZNF570
ZNF569
S100Z
MRPS18C
HELQ
MFSD3
L3MBTL2
STX18
ATP5PO
ZMPSTE24
ITGB3BP
EFCAB7
NOP16
HIGD2A
CASP8
RPL23A
GTPBP3
S100A5
ALG10B
SUPT4H1
TBC1D19
TUT1
ESCO2
ZNF226
TOX
WDR46
PFDN6
MLEC
SAR1B
TMC8
AKIRIN2
ENOX2
COX16
MKRN3
SUGP1
MAU2
ZCCHC4
CPPED1
ZNF420
TOP3B
SEL1L
SLC7A8
GTF3C3
LRRC29
WDR83
WDR83OS
NUCB1
YIPF2
TIMM29
CIC
DDX49
COPE
DHX8
SNIP1
AP1G1
MTOR
CCDC88B
HEXIM2
ASNS
SMG8
DEF6
NUP54
LMNB2
LSG1
TMEM242
ZNF235
ANAPC5
EXOSC4
HBP1
GTSE1
ZBED4
ING4
BPI
B3GALNT2
FNDC11
PIH1D2
NKAPD1
UBC
RTTN
ATP5F1D
MAX
CLIC1
ANKRD40
ARHGAP4
ZNF227
CST7
NDUFB3
FAM126B
ITGAL
CTDP1
CTF1
MGRN1
PPIP5K2
SMARCA2
RPP40
CCDC200
UBE3B
KCTD10
VKORC1
SPHK2
RPL18
HUS1
DNAJB4
MYO18A
GOLGA3
CHMP7
SETMAR
VPREB1
MRPS16
TEFM
MRPL16
MTBP
MRPL13
SDE2
KAT7
SMUG1
ZNF175
LAX1
CALM2
SEC13
SLC39A3
DENND2D
EMSY
WASF1
CDC40
TMEM229B
SSH2
ARHGAP45
GRAP2
PPP5D1
CALM3
ZNF277
DOCK4
FIS1
PTPN22
AQR
GAS7
RAB29
CNIH4
IQGAP3
MAP3K7CL
NEDD8-MDP1
NEDD8
GMPR2
TMEM123
BMS1
METTL26
SLC25A19
BUB1
CCPG1
C15orf65
ZC3H6
PDE4B
TRUB2
COQ4
CALM1
TTC4
LTN1
ZNF224
AHCTF1
KIF15
KIAA1143
IZUMO1
ETFDH
C4orf46
PPP2R5B
ZC3HC1
RNF125
MTMR9
SASS6
C16orf54
ARHGAP19
C1orf109
CDCA8
ZNF850
VRK1
GRHL3
SNAP47
JMJD4
SNX16
ZNF605
CTHRC1
ASIP
KMT2D
SOAT2
NUP153
GTF3C5
MRPL3
ZNF688
NKD1
ARHGEF18
SELENOH
TMEM43
CHCHD4
ZNF436
MYL6B
HDAC9
TBL3
RAB27B
RRP15
APOBR
MAF1
TARBP2
RNF220
PIK3CG
H4C11
DMAP1
CLP1
EIF5B
TXNDC9
ZDHHC14
CFL1
NR1H3
ACP2
DDX1
MICAL1
TBC1D31
HNRNPA1L2
LRP6
ATP5MF-PTCD1
ATP5MF
CCDC88A
SVIP
CDC6
IPPK
HSPH1
CDK19
AMD1
ZNF407
DNAJC2
KDM3A
RAB30
TOR2A
MTRF1
TOMM40
MRPL21
IGHMBP2
ZNF554
GABPB2
PIKFYVE
ZNF37A
ATP2A3
STOML2
MAPRE2
METTL7A
ZNF805
SLC39A8
GCSAML
LUC7L
VPS52
RPS18
ADGRE2
SLC24A1
DAAM1
LRRC45
CENPX
VPS13B
UTRN
CNPY2
CD28
LOC388282
ZNF451
DPEP2
UBE2V1
MRPS23
GPR137
PSD4
AP2B1
RGS14
PUM3
RPS6KB2
TATDN3
NSL1
DRG2
DFFB
CEP104
SAMD3
ALKBH3
IL21R
C8orf33
RALBP1
NRDE2
CCDC77
HSCB
CHEK2
SREK1IP1
CWC27
PRDM11
CSTF2T
RNASEH2C
UCHL5
RO60
HIF1AN
CCDC174
MTA3
IGF1
EIF2D
IST1
GPR171
BRWD1
RAD52
ABCB8
TMEM186
PMM2
COMMD9
STX16
ARHGDIB
ZNF45
SCAMP4
ADAT3
MEF2C
ADO
ZNF189
MRPL50
KBTBD8
HEXIM1
ZNF547
TRAPPC2B
DUSP2
LSP1
FRA10AC1
TBRG4
NELFB
LMAN2
PSMC3
CAND1
TMED9
WBP1L
MCM7
AP4M1
PHB2
DIABLO
SLC39A13
GPR68
METTL18
C1orf112
PGM2L1
MED18
NOLC1
HHEX
ATXN2L
RACGAP1
EIF4A2
IDH3B
FCSK
ZNF276
SERPINI1
PDCD10
GALM
ZNF384
NICN1
MRPL54
APBA3
B4GALT7
DPF1
ZNF302
PTRHD1
CENPO
LIN37
CDC14B
GAS2
OR10P1
RPS3A
SEPTIN9
STING1
PIGL
ZNF548
CXCR3
INO80B
DSCC1
POLRMT
TRMT6
MCM8
WRAP53
TP53
CUEDC1
RPL22
ZNF652
ZNF461
SLC25A51
H4C3
PPME1
C2CD3
VPS37C
CD3E
ESPL1
ZSCAN23
HMGB1
USPL1
ZNF565
ZNF146
FDPS
PRAF2
NUP107
TMA16
BRMS1L
OSCAR
NDUFA3
UTP11
ABLIM2
ZNF148
LAS1L
LRWD1
ALKBH4
TRABD
THEMIS
TMEM41A
ATXN2
TM9SF4
C10orf88
MED11
ANTKMT
RASAL3
KATNB1
ZFPL1
CDCA5
KIF20A
BRD8
SERBP1
ACLY
SUGCT
MPLKIP
MTERF4
CLDN12
OR1F1
SESN1
CEP57L1
PLEKHA1
TMEM199
POLDIP2
PCM1
EIF1AD
BANF1
SEC11C
MIS18A
UBL7
AHCY
RPL8
GGPS1
ARID4B
RUFY3
SMN2
SMN1
SF3B2
QTRT2
CCDC191
INTS5
ASCL4
THOC6
HCFC1R1
LRRC37A3
TAF3
NXT1
EXO1
CHRNA5
POLR2J3
TIAL1
FAAP24
CEP89
SLC26A11
CKM
KCNN3
FKBP5
MC1R
SUGT1
PRKCSH
CCDC151
SART1
WRNIP1
WDR11
TIMM9
KIAA0586
HEMK1
PSMB6
SOD2
WTAP
MTR
TTC26
H4C8
UFSP2
CAPN10
DARS2
CENPL
SDCCAG8
CEP170
RBM25
BOD1L1
USP35
KCTD21
ETFB
ZWILCH
RPL4
UBB
DPP9
NOTCH1
FAM227B
DTWD1
RDH14
TNFAIP8L2-SCNM1
TNFAIP8L2
MRPL58
ILF3
LRRC1
SCN3A
PABPC1
MXI1
TMEM33
PPP1CC
HAUS6
OGFOD2
LAMP1
APBB1IP
STRA6
GTF2H2C
GTF2H2C_2
HIRIP3
ZNF350
MAD2L2
GSTA4
VAPA
SH2D6
NOL8
CENPP
VPS41
CYP2U1
PTPRCAP
RAD54L2
SLC44A1
MEA1
SRRT
C21orf58
TRAF3IP2
CCNL1
TOB2
EIF1B
TSPAN10
NPLOC4
TERF2
KRI1
RASGRP2
WAPL
OGT
ACOT7