ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX4023329 | T-47D
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◢ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◢ SRX535453: A-375

◢ SRX535454: A-375

◢ SRX5501657: A-375

◢ SRX5501659: A-375

◢ SRX5501661: A-375

◢ SRX10131662: Bronchial tracheal epithelial cells

◢ SRX10131663: Bronchial tracheal epithelial cells

◢ SRX20436771: DLD-1

◢ SRX20436779: DLD-1

◢ SRX10715331: HCB1

◢ SRX10715344: HCB1

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◢ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX20230567: Ishikawa

◢ SRX20230568: Ishikawa

◢ SRX20230569: Ishikawa

◢ SRX20230570: Ishikawa

◢ SRX20230571: Ishikawa

◢ SRX20230572: Ishikawa

◢ SRX20230573: Ishikawa

◢ SRX20230574: Ishikawa

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX7366779: MCF-7

◢ SRX7366780: MCF-7

◢ SRX7366781: MCF-7

◢ SRX7366782: MCF-7

◢ SRX7366783: MCF-7

◢ SRX7366784: MCF-7

◢ SRX244177: MM.1S

◢ SRX244180: MM.1S

◢ SRX327758: MM.1S

◢ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◢ SRX1637467: MOLT-4

◢ SRX1637469: MOLT-4

◢ SRX1637470: MOLT-4

◢ SRX2375362: MV-4-11

◢ SRX2375366: MV-4-11

◢ SRX14127531: OCI-AML3

◢ SRX14127532: OCI-AML3

◢ SRX14127543: OCI-AML3

◢ SRX14127544: OCI-AML3

◢ SRX18455086: OCI-AML3

◢ SRX18455087: OCI-AML3

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◣ SRX4023329: T-47D

◢ SRX4023330: T-47D

◢ SRX728779: THP-1

◢ SRX728780: THP-1

◢ SRX9730732: THP-1

◢ SRX9730733: THP-1

◢ SRX9730734: THP-1

◢ SRX9730735: THP-1

◢ CDK9: STRING

HIBADH
SPATC1L
SESN1
FBH1
ANKRD16
PKNOX1
SP2
KDM4B
ACAP2
DNM2
RFX1
ZNF687
PLAG1
CHCHD7
ZSWIM3
ACOT8
TMEM60
PHTF2
MAF1
RAB5B
FRMD5
MRTFA
UBE2J2
NLK
FLAD1
TRAF2
CYTH2
ANKHD1-EIF4EBP3
ANKHD1
EVI5L
HIP1
G3BP1
JUP
KAT6B
ZNF718
AK2
ATP5F1B
CIC
OGDH
SP1
PANK2
CBX5
HNRNPA1
ZNF595
OSBPL2
AKTIP
H2AZ2
STT3A
ZNF141
ABHD2
GATAD2A
ACTR1A
CGGBP1
ZNF654
ZMYM5
LRCH4
FBXO24
RBM27
C7orf50
OSBP
CEP131
ANKZF1
PXMP4
SLC25A25
NAIF1
RHPN1
RAB11B
HSPA2
ZMYM2
STIP1
TNIP1
TMEM160
MPZL1
MSANTD4
PPIA
ZSWIM4
CTTNBP2NL
NFATC2IP
EIF4A1
SLC26A2
NFE2L1
TDRKH
DCTN4
BCL2L1
LYNX1-SLURP2
LYNX1
WFS1
NCOA2
ELMO2
PABPN1
XPO1
FAM126A
FKBP5
HTT
GDI2
OXLD1
CCDC137
KHSRP
RPLP0
CENPA
TMEM218
SPRYD3
PWWP2A
SLC25A42
MEAK7
SFXN5
ETV5
RAB40C
TMEM45A
HLTF
YPEL2
SCAI
HBP1
PRRC2B
RPL36AL
MGAT2
RAB5C
CDR2
RAB3A
PODNL1
DCAF15
MED30
PLCL1
RNF34
MACROD2
CHD6
KIF1B
ZFYVE21
XRCC3
TUBB4B
CDH15
TCERG1
MUC1
RRBP1
SFXN3
PDZD7
SIPA1L2
ZNF564
EIF2AK3
IP6K1
FAM222B
TEPSIN
NDUFAF8
MLLT1
NUMB
TRAFD1
PRDM11
GATAD2B
ATF7-NPFF
ATF7
ENSA
CBLB
MYH10
MYH9
PRC1
BAIAP2
TOM1L2
DRC3
KMT5C
PNN
MAP3K3
FMNL3
EFNB2
PGAP2
CANX
ZNF281
UGP2
FRYL
ARL4A
HDGFL2
CYB5A
PLIN3
FOXK2
MYH14
TXNDC16
ENPP5
CCDC61
HNRNPC
HNRNPL
ERCC2
TARS2
HGH1
ZSWIM1
PCF11
TOP2A
KIAA0513
MXD4
CRLF3
SP4
SAP30L
TSPAN15
EHBP1
STK17A
ZSCAN32
ZNF174
TCF3
AKAP8
ZNF555
PLEKHH2
CNNM2
ERI3
MTMR12
RPUSD3
DNAJB5
LLGL1
TRIM32
ASTN2
MAML1
KCTD7
IER5L
DNAJC14
OTULINL
JAKMIP1
DAZAP2
EPHB3
ACTR2
TLE1
EPHA7
BCAS3
PHF20
PODXL2
CCDC200
ZNF691
ASPH
SPSB3
NUBP2
TAF7
TP53BP1
KIAA0232
ENTPD7
ZNF200
GNAZ
MPRIP
OSBPL3
MEGF9
USP20
C9orf78
RBM39
MIEF2
SHKBP1
TTBK2
HRAS
ZRANB3
R3HDM1
VIPR1
TBC1D10B
MYLPF
FANCF
PMS1
ORMDL1
IRS2
TRIM9
NIPAL3
STPG1
HESX1
APPL1
ZNF695
ABCA7
FAM72C
FAM72D
STARD3NL
HNRNPR
RSBN1L
CEBPG
MPHOSPH8
RAB40B
DCUN1D4
MEF2D
ZC3H6
STAT3
GET4
RTRAF
PDPK1
FKBP14
RPN2
MROH8
GTPBP1
CHCHD2
UVRAG
KLF5
RUVBL1
DAPK3
KANSL1
PPP2R5A
PDP2
ME2
SLC25A19
NUBP1
SLC46A3
HEY1
IVNS1ABP
SMAD2
PPP3CA
NXT1
UBP1
GOLIM4
C12orf65
TMCC2
RPUSD1
CHTF18
TPCN1
IQCD
TIAM1
LOC150051
GLRX5
MAST4
EEA1
MLH1
EPM2AIP1
SRGAP1
RFX2
NR2C2
TSACC
CCT3
ZCCHC14
ROGDI
KMT5A
TANGO2
ARVCF
SP3
GPR158
DPP3
FZD4
NCK1
ALKBH5
FOXO1
PPFIBP1
UBTD1
MMS19
MRPL37
CYB5RL
INTS3
PTK2B
TRIM35
SMARCD2
KAT7
ADRM1
GATM
SPATA5L1
PCNX3
PEF1
ZNF492
GAS2L3
ARAF
AGPAT1
ZNF563
RNF5
ZBTB7A
SSBP2
GLCE
MAFA
C16orf72
TRAPPC11
RWDD4
SLC41A1
TOP2B
DMBX1
PBX1
VPS35
PRMT1
CREBRF
KCTD9
CDCA2
C22orf39
GNA12
YWHAZ
IGSF9B
GALNT18
SUFU
ORC2
MDC1
SIX2
JPT1
ARRDC3
TRAF7
PC
PBX3
KDM6A
MACO1
MAPK9
AKAP5
SLC25A28
NUFIP2
POLR3A
JPT2
SEPHS2
SPAG7
DIAPH3
CAMTA1
ZBTB18
ANP32E
CCDC153
ENO1
CIT
DRAP1
C11orf68
SPC24
FOXN3
COPS7B
PDE6D
FYN
EIF5
HNRNPAB
HOOK1
GLIS1
SSBP3
NXPE3
SYPL1
GLCCI1
ANP32A
PLCG1
SRP19
PADI2
FAM72A
CCDC102A
LMAN2
BAZ1B
CCNL2
NF2
ZNF626
HSPA5
GOLPH3L
MRPL34
ABHD8
BBX
AP5Z1
ITSN1
CRYZL1
FMN1
WBP1
IL6ST
INIP
ZNF443
PSKH1
SARNP
ORMDL2
MARCHF3
RAB39A
RAPGEF2
SEPTIN9
ATP7B
ALG11
FICD
N6AMT1
DDX11
MAPK8IP3
LMTK2
RMI1
HNRNPK
ERAP1
FKBP8
SLC39A3
PIM1
TMEM53
ARMH1
IVD
PER2
PGK1
HNRNPLL
PAX9
ACTN1
OTUB2
GPR108
PCYOX1L
SCAMP2
ZNF519
IGSF8
ANKRD54
OTX1
RALGPS1
PPM1K
HACL1
BTD
LINC02210-CRHR1
STK11
OPA3
WBP1L
TDP1
EFCAB11
KBTBD3
AASDHPPT
ZNF724
EIF4A2
CASKIN2
TSEN54
ACYP1
PNKD
AAMP
ZDHHC24
ACTN3
OXSR1
NR3C2
PRKACA
PPM1B
DNAJC27
DGCR8
PSMB3
GBF1
AZIN1
CCNG1
FHIT
MTOR
CNOT3
PROSER3
HSPB6
SORT1
PPP6R3
GFPT1
JARID2
SUN2
WDR81
INAFM2
ACTR1B
RAB8A
ATP5F1E
PAOX
SLC39A1
DPY19L3
STX5
FAM111B
SMARCA2
CCT7
PRADC1
AP2A1
COQ7
JAG2
NEMP1
NAXD
TNRC6B
PTPN13
SBDS
BBS10
TYW1
HDAC11
SELENOO
TMTC4
ZNF143
GRPEL1
PDIA6
ALKBH7
IRX2
C5orf38
RGMB
ATP6AP1
BPGM
CFAP410
DYNLRB1
COPG2
BNIP3L
FAM228B
PFN4
GNA11
HDAC4
RGS9BP
ANKRD27
USP16
BUB3
CYC1
KSR2
AKAP13
SDC2
MCM3
MARCHF2
RPS11
CTPS1
CBX8
DHCR7
CAND1
MIA3
TMEM161A
ZNF211
HSP90AB1
INPP5B
ZNF774
ING1
LIX1L
PDXP
RHOB
LCORL
SLFN5
CREB3L2
MAFB
KANSL2
SLC15A4
ELAVL1
PRKD2
TEN1
ACOX1
ECHDC3
TLE6
YIF1A
RRAGC
MTFR1
LIN37
FKBP3
PRPF40A
ARL6IP6
HS3ST3B1
NBR1
RTTN
NFIL3
MAF
ZNF367
ZBTB20
ISOC2
FAM174C
TPPP
POLD2
RNF20
CEP152
TOM1
BICRA
DUSP10
MEA1
CCDC91
ZSCAN20
CHPF2
HINFP
ARL17B
ARL17A
RBM4
ZNF823
KCNAB2
KANK3
PGD
TTLL5
ERG28
GRK6
ZNF98
OTUD5
ZNF44
ORAI3
DDX19B
AARS1
ATP6AP2
F11R
STX7
MAN1A1
DROSHA
C5orf22
ZNF493
ANAPC15
AMER1
RNF13
UBFD1
EARS2
CREB3L4
TRIM45
NRXN2
ZNF91
S100A16
USF3
TOMM40L
KMT5B
ZBTB3
SPDYE14
SPDYE10P
CASTOR2
MON1B
ZNF418
ZNF727
KMT2A
LTN1
SFPQ
SLF2
PACSIN2
ZNF77
HMGN1
ARHGEF9
LETM2
PAFAH1B2
ZNF799
SAMD4B
RCOR1
YJU2
ZNRF2
SUZ12
RNF187
RPL18A
KDSR
TNRC18
LAMTOR4
MED7
MCM7
AP4M1
RTN4
HEXIM2
BAMBI
ZBED5
E4F1
TBC1D10A
MAD1L1
TYW1B
EPB41
SUOX
NOVA1
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
RFX3
MAGI1
MCU
ZNF775
ZDHHC13
KLHL25
SNX25
MROH1
USP3
BRPF3
CNTN1
ASF1B
RUVBL2
GYS1
SURF4
DDX49
COPE
ZNF101
MZF1
STARD5
EIF1
RBM15
ZNF92
CHD8
MAP2K3
PER3
IL10RA
ESR2
PRKCI
HNRNPA0
RNF6
COL5A1
HERC3
INPP5A
PKNOX2
YBX1
ZNF14
DLGAP5
BBS12
ZNF436
MTHFD1
STARD7
TPRG1L
KDM4A
XXYLT1
FAM117A
TRIQK
TMEM41A
SSR4
IDH3G
BAHCC1
XAB2
KANSL3
FGFR3
RSPH4A
CDC25C
FAM53C
GALNT2
UPRT
ID2
WDR45
RNF139
SLC35E2A
TMEM170A
SPPL3
PTDSS1
MTERF3
PNPLA8
CREB3L3
DNAJB1
TECR
SPRYD7
VEZT
FGD6
GALNT10
ZNF441
LAPTM4A
ONECUT2
ANO10
HAUS7
TNIK
CDCA7L
SENP5
DEPP1
SOCS5
ZNF726
ELF2
DDX59
PCYT1A
MAP3K9
ATP5PD
LUC7L2
SYT7
CHAF1A
ZIC3
C19orf48
POC1B
POC1B-GALNT4
UAP1
ANKRD13A
ZNF124
H2AJ
TSPAN4
POLR2L
CERS6
FAM76A
WWP1
UBE2C
LRP10
MBIP
PCP4L1
FAM104B
SETD5
ZNF440
PJA2
PXMP2
POLE
PSMB10
KIAA0895L
MGAT4A
ATP1A3
TCP1
MRPL18
MIGA2
GLIPR1L2
ZNF680
ZBTB25
ZBTB1
HEATR5A
CIZ1
SMDT1
DLL4
LSM4
FRA10AC1
CSE1L
GMNC
ITGB1BP1
CPSF3
ZNF430
URB2
TAF5L
FUT8
ANKRD18B
ERCC1
FBXO8
CEP44
OS9
NUF2
ARHGAP39
CGRRF1
ZNF703
GNAL
LRRC37A3
EPHA4
THOC3
GRSF1
NSMCE1
NKX3-2
AFF1
GUK1
BARX2
GRAMD2B
COPS3
ATP13A3
ACAA1
PPP1R7
PASK
ZNF700
C3orf18
LYPLAL1
NGDN
CDON
ZNF609
DNAL4
NPEPL1
ZNF17
CTNNB1
DPY19L4
OPA1
ETFBKMT
ZNF491
ZNF66
NUDT4B
NUDT4
MAP4K5
ATL1
IPO9
C1orf53
ZFP91
LPXN
HPCAL4
SGSM1
KLLN
PTEN
FAM72B
ZNF709
DTX4
RHBDD1
PRDM9
C16orf71
ANKS3
WWOX
RNF144B
ENTPD4
RBMX
ZMIZ2
NISCH
SNCB
EIF4E1B
MEX3C
AVPI1
INCENP
CAPS2
COPZ1
NBN
ZNF669
STX18
IL11RA
ATG101
SNX15
LRP12
ZNF354C
NMT2
SIN3A
ALDH3A2
MBOAT2
RCOR3
PAF1
MED29
ZNF341
ZNF844
POR
TMEM30B
ANOS1
GNL3L
YARS1
S100PBP
SNX18
LANCL2
FAM76B
CEP57
VAT1L
KAT6A
ZNF878
LRCH3
PEX2
SYDE2
B4GALT7
RBX1
PMF1-BGLAP
PMF1
DPH6
COQ8B
WDR53
FBXO45
TESK2
PPM1L
MSMO1
ZNF195
B3GALT1
GLRA3
ATR
ATP6V0A2
GNB4
USP36
ZNF776
RAG1
AFF4
TRAF6
MTCH1
EXOC6
E2F6
CENPN
RMC1
SYNGR2
HES4
SLC44A1
GBA
OGFOD3
HEXD
UBC
DGLUCY
RPS6KA5
GOT1
MAPK1IP1L
TBC1D12
LMBR1L
IQCG
MKRN2
GPR137
LMLN
TMEM9
SNRNP25
POLR3K
ACBD3
BAD
VBP1
PLS3
CNOT6
USP14
SWSAP1