ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5501661 | A-375
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◢ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◢ SRX535453: A-375

◢ SRX535454: A-375

◢ SRX5501657: A-375

◢ SRX5501659: A-375

◣ SRX5501661: A-375

◢ SRX10131662: Bronchial tracheal epithelial cells

◢ SRX10131663: Bronchial tracheal epithelial cells

◢ SRX20436771: DLD-1

◢ SRX20436779: DLD-1

◢ SRX22001291: DLD-1

◢ SRX22001292: DLD-1

◢ SRX22001293: DLD-1

◢ SRX10715331: HCB1

◢ SRX10715344: HCB1

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◢ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX20230567: Ishikawa

◢ SRX20230568: Ishikawa

◢ SRX20230569: Ishikawa

◢ SRX20230570: Ishikawa

◢ SRX20230571: Ishikawa

◢ SRX20230572: Ishikawa

◢ SRX20230573: Ishikawa

◢ SRX20230574: Ishikawa

◢ SRX10144542: Kasumi-1

◢ SRX10144543: Kasumi-1

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX7366779: MCF-7

◢ SRX7366780: MCF-7

◢ SRX7366781: MCF-7

◢ SRX7366782: MCF-7

◢ SRX7366783: MCF-7

◢ SRX7366784: MCF-7

◢ SRX244177: MM.1S

◢ SRX244180: MM.1S

◢ SRX327758: MM.1S

◢ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◢ SRX1637467: MOLT-4

◢ SRX1637469: MOLT-4

◢ SRX1637470: MOLT-4

◢ SRX24723215: MRC-5

◢ SRX24723217: MRC-5

◢ SRX24723219: MRC-5

◢ SRX24723221: MRC-5

◢ SRX2375362: MV-4-11

◢ SRX2375366: MV-4-11

◢ SRX14127531: OCI-AML3

◢ SRX14127532: OCI-AML3

◢ SRX14127543: OCI-AML3

◢ SRX14127544: OCI-AML3

◢ SRX18455086: OCI-AML3

◢ SRX18455087: OCI-AML3

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◢ SRX4023329: T-47D

◢ SRX4023330: T-47D

◢ SRX728779: THP-1

◢ SRX728780: THP-1

◢ SRX9730732: THP-1

◢ SRX9730733: THP-1

◢ SRX9730734: THP-1

◢ SRX9730735: THP-1

◢ CDK9: STRING

WDR74
GSTA4
H4C14
H4C15
MTRNR2L2
NUF2
MTRNR2L8
FRA10AC1
EIF2D
DSTYK
DCP1A
S100A2
GBA
TRIP4
RAD54L2
TBC1D19
H1-2
HMGB1
USPL1
CDK5RAP1
STX16
SCAND1
CWC25
DRG2
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
SF3A3
RBBP5
POLDIP3
RPS7
STX18
NDUFS3
KBTBD4
DHX8
H4C11
PLEKHM3
ATP5MC2
TBL3
NBPF1
SAR1B
RPL37
TRIAP1
H1-3
RGPD2
RGPD1
SMARCD2
GEMIN7
S100A16
RCAN1
SELENOH
CTNNB1
NME1
CCNL1
ZBTB45
SECISBP2L
SSBP1
CRB1
UTP3
H2BC21
H2AC20
H2AC21
TTC26
MTF2
SLC24A1
MRPS23
GTF2H2
H4C6
BNIP1
H2AC19
H2AC18
MAN2C1
INTS12
GSTCD
RPS6
WDR36
FAM3C
YWHAE
MLEC
SERPINE2
RPS2
H2BC18
H3C13
ERCC1
DMAP1
LY6K
DPP9
LRRC37A3
GTF2H2C_2
GTF2H2C
SNAP47
JMJD4
AURKAIP1
TATDN3
NSL1
TUT1
PSMF1
PPP6R1
RAB5IF
RBM15B
STAT3
ATF6
LAMP1
TBC1D13
MRPL30
MITD1
H3C3
TARS2
TMEM222
H3C15
H3C14
ALG10B
RPS27
MYO9B
HAUS8
FOXJ3
C17orf75
POLG
YIPF2
TIMM29
METTL25
CCDC59
EFCAB2
RARS1
MRPL16
SCNM1
LYSMD1
H1-4
TBL1X
RPL12
LRSAM1
H4C12
C12orf57
NOTCH2
PSMD3
SMG8
KMT2C
RPS20
DDIT4
FAM227B
DTWD1
GTF3C3
KDM1A
MRPL21
IGHMBP2
NOC4L
DDX51
COMMD9
JRK
COX5A
KBTBD6
SLC35E2B
TACO1
COMMD2
LARS2
PDCD6
NR1H2
NDUFC2-KCTD14
NDUFC2
U2SURP
MDM4
SLC44A1
UBQLN4
LAMTOR2
ZNFX1
SIRT4
SDHAF3
KRR1
ZER1
TAGLN2
MED18
RANBP2
AGK
GNAI2
TSSK6
NDUFA13
COQ8B
NKIRAS1
RPL15
FAM98B
NOB1
MAPK1IP1L
NUP107
CDK2AP1
MTERF4
TCEA2
RUVBL1
NCBP3
SSBP2
TTC1
SAMD4B
SPRY4
NMNAT1
LZIC
RPS28
NDUFA7
ATP5MPL
TAMM41
H3-2
MED23
TSPAN10
NPLOC4
PRKCE
SEC16B
SEC13
TSC2
NTHL1
DPY19L4
CDKN2AIPNL
MTIF2
KLHL12
NDUFA12
MRPL58
CCDC90B
TVP23B
PPRC1
GALK2
COPS2
USP4
WDR24
HEATR1
PMS2
AIMP2
SLC25A51
MKRN2
ASB6
CDC73
MRPL1
MBTPS2
KANSL3
NPAS4
CUL4A
PCID2
METTL9
MRPL19
POLR2J3
DDX1
INTS1
FRG1
KDM8
PSMD11
KLLN
PTEN
NLE1
ANP32E
SRSF4
KNL1
RPS3
VPS25
NSFL1C
MRPL53
PDE8A
FXYD3
GAPDH
INTS5
TTPAL
ARL2BP
CCDC88A
DCAF10
VPS33A
IQCH
AAGAB
AAR2
UBOX5
FASTKD5
BUD13
ZBTB37
RINT1
SNRPB
H4C4
ZSCAN22
NCOA3
H4C5
TRMT61B
TMED2
MAT2A
RBM39
CLUAP1
PDE4DIP
GFM2
SLC25A32
DCAF13
NFE2L2
ID1
PRKCSH
CCDC151
LONP2
ABCC11
SLC25A13
EIF3E
ADPRHL1
PEMT
DPH7
UQCC1
DNAJC24
DCDC1
DNAJC11
TOR1AIP1
UBL7
AP5Z1
POMP
STARD4
SLC20A1
BBS1
MICALL1
YWHAZ
CATSPERG
H3C8
SSNA1
ANAPC2
TTC4
FBXO46
YARS1
S100PBP
SNAPC5
VTA1
NMBR
H4C9
AP3B1
ALDH7A1
CALM2
FBXW2
H2BC8
H2AC8
PARP2
RMDN2
PHLDA1
ST3GAL2
NUP153
ELAVL2
WASHC2A
MRPL38
SNRPB2
DDX59
CCDC15
SLC35E1
RPL27
CHD1L
H4C3
PRKAB2
LZTR1
ZNF3
LRRC46
WDR31
H2BC11
H2AC11
USP30
PANK4
DFFA
CIAO3
OGT
SACM1L
ALDOA
PPIP5K2
GOT2
H4C2
SPRY2
PA2G4
PPP6C
GARS1
AP1G1
HEXIM1
ZC3HC1
ZBTB40
RHOT2
LRATD2
H4C8
VPS4A
PSPC1
ZNF721
PIGG
H3C2
TPT1
LIMA1
ZMPSTE24
SNRPE
TSNAX
TMEM101
PRPF6
NUP188
DOLK
ELK4
H2BC17
H2AC17
UBA2
CCDC125
TCHP
MRPL24
TEFM
KIF15
KIAA1143
NAGK
PSMD9
HPD
GORAB
EPHA3
CCAR2
ECSIT
MRPL40
HIRA
NECAP2
WWTR1
DISC1
EEF2K
AGMO
BANP
ZC3H10
RAD23A
TRPC4AP
ZSCAN25
HDGF
AP2B1
CCDC174
ZNF770
SRRT
PPID
ZCCHC4
PARK7
ARL14EP
G6PC3
CDK12
SLC9A1
COG2
TSR3
GNPTG
EPRS1
WIZ
NRF1
SMG7
C1orf53
TOP3B
SH2B1
TUFM
MRPS31
PRRG2
NOSIP
ZNF594
GOSR1
POLR3E
TTI2
VPS72
MRPS24
B3GAT3
DHRS3
TRIM62
ATP5MF-PTCD1
ATP5MF
COMMD1
UCHL5
RO60
USP48
STYXL1
MDH2
ANXA2R
AMOTL1
GID4
ATPAF2
SART1
ATR
WDR70
NME6
RRP9
PARP3
MRPS14
RPL10
EIF3H
SYMPK
FOXA3
TMEM127
CIAO1
MTMR2
SLC39A13
CSRNP1
CHMP4B
ZNF212
POR
TOB1
STAT1
CREBL2
IPO4
ZNF106
SYT5
DDX23
PAFAH2
SMG5
RPTOR
FBXO38
NOC3L
LENG8
DMTF1
CSDE1
COQ5
KEAP1
CSNK1G3
TRIM16L
AXL
H2BC14
H2AC14
NDUFS7
DDX46
LDAH
DR1
MUL1
ERLEC1
ASB3
PDE12
PRDX1
TRMO
GPS2
KLHL20
EXOSC8
RNF168
ILF2
PRCC
MRPS15
ZNF148
CASC3
NFKB2
R3HDM2
RUSF1
INO80B
COPS6
TTC32
ISG20
PRDM5
CT45A7
CT45A6
CT45A9
CT45A8
CT45A5
CT45A2
RBM28
ING4
BRMS1
TRMT6
MCM8
S100A13
CHTOP
MCRS1
BCAT2
TIMM22
WASHC2C
SCRIB
PIGU
DNAJB12
COQ9
CIAPIN1
TAS1R1
NOL9
RAD52
SRSF7
USE1
SLC26A2
H2BC4
H2AC6
CLUH
RFC2
TRMT1
VPS28
IFNAR1
HTR5A
TMEM199
POLDIP2
ATXN2L
LRRC29
RPL29
PCBP2
LRRC59
EEF1A1
ARL8B
CNOT2
KRT8
BFSP1
KRT18
SLC12A2
RPL41
H2BC13
H2AC13
SLC25A45
TMPRSS5
SLX1B
SLX1A
BOLA2B
BOLA2
SNRPD1
AAAS
AMACR
PRR19
PAFAH1B3
FGFBP3
FOSL1
TOMM22
SNX17
EIF2B4
MIA3
LRWD1
ALKBH4
HSPA8
STT3B
TOMM7
PYGB
TRIM46
KRTCAP2
TFB1M
SPRED2
ARHGEF12
FAF1
MPHOSPH10
MCEE
SMIM14
ZNF185
SCO1
ADPRM
LOC112694756
RIN1
CALR3
C19orf44
KCTD5
IPPK
BMS1
CCDC124
HSPA9
ARHGEF7
SASS6
TMEM179B
TP53I3
FOXO3B
UNK
RPS6KB2
STOML2
TAF1B
UQCRC1
MFAP3
FAM114A2
RPL7A
MED22
ZSCAN30
C16orf72
MSANTD2
OCEL1
PGAP4
ADORA2B
MRPL4
FAM168A
ATP6V0D1
SEC14L1
SCAP
H3C4
ANKRD13D
TRNAU1AP
RPL7
MEMO1
ALG14
NT5C
DCAF8
NDUFAB1
SMIM12
WASHC4
ZNF398
ZNF425
TDG
ZNF350
ZNF668
ZNF646
TPK1
TUT7
USP1
MRPS21
C11orf49
FAM228B
SF3B6
NOL11
NUP133
DYM
ADAR
MAZ
SOS1
MNAT1
LRRC49
THAP10
GRB7
IFRD2
SPATC1L
TOB2
STAU1
PSMD6
LDHA
MAD1L1
PUM2
DYNLRB2
DDX27
CAMKK1
GPAM
WASHC5
NSMCE2
HIF1AN
ANKRD54
NUCKS1
TMEM126A
EIF3L
PDS5A
DPY30
SH3TC1
RFFL
SPRYD4
MRPL39
TIGD6
HMGXB3
THOC5
RICTOR
TMEM250
MAP2K3
NXF1
LUC7L
COX7C
HIRIP3
STIP1
PURB
AVPI1
COPS4
QTRT1
ZNF696
KXD1
CSTF1
AURKA
TMEM62
CASZ1
SH3TC2
SMN2
SMN1
GTF2H4
APH1A
YJU2
SYTL2
CATSPERE
TSSC4
ADPRS
POLR3D
TSFM
EIF3C
EIF3CL
PNPLA6
MRPL11
PLK2
DBR1
AATF
RPL32
HIPK1
CYB561
CEP350
EFTUD2
CCDC103
RFX1
NR1H3
ACP2
RPL5
MCOLN1
G3BP1
ICE2
CGGBP1
FAM200B
C3orf38
SPNS1
C19orf53
GNB2
GINS3
DCPS
MAML3
COX7A2
RPL30
ZC3H6
CYCS
SPRED1
CCDC86
ADK
RPS13
TXNDC15
RAD9A
ATAD3A
GGPS1
ARID4B
RPL38
BABAM1
ATF3
KLHDC10
DNLZ
AGL
MGST3
NUP214
THEM4
THUMPD3
ZNF846
DSN1
C11orf65
OR2L13
PSMB4
RANBP6
PEX12
DDX18
SCAF11
HINT3
FCRLA
C1QTNF3
KMT2D
KPTN
UBR4
SLC35B1
EXOSC6
SNF8
TPM3
RPL21
RBM12
CPNE1
TMEM168
JUNB
PKIG
BTBD1
SRRM1
ATRN
UTP6
FBXO27
RCOR3
ZNF518A
GET4
DHPS
CCDC107
SRFBP1
CEP78
ALDH1A3
KCNMA1
CLTC
H2BU1
H2AW
FBXW9
MINDY2
FAF2
PFDN4
TRMT10C
BRD2
H2AX
SF3B2
NUDT15
GAPVD1
METTL2A
ATAD2B
TEX261
GPATCH4
TRIP6
NUDCD1
TRAF7
SERBP1
TFRC
NOL7
RAF1
H4C1
CLPTM1
PIGL
POLD3
C8orf37
LSM11
H3C1
GATAD2A
SRCAP
LOC730183
DDX50
ZNF410
TM2D3
TRIB1
BRIX1
METAP2
ACBD6
PGAM5
RPL22
SLC35B4
UBA52
ABT1
ILF3
DNAJC25-GNG10
DNAJC25
CUEDC2
MRPL27
EME1
PPP1R15B
RCHY1
EEA1
TCF12
RPLP0
TMEM259
CCZ1B
PCOTH
MIPEP
MAP2K2
GTF2H3
EIF2B1
JOSD2
SLC3A2
YTHDF2
ZNF589
CAMLG
RNASEH2A
IVNS1ABP
H2BC12
H2AC12
NCAM2
DNASE1L1
ARHGAP5
TRAPPC3
PTBP1
INTS4
DYNC2I1
CCNT1
ZDHHC7
WDR35
CCDC83
SLC6A15
TMTC3
CEP290
XRRA1
SPCS2
GPKOW
MFSD14A
GEMIN6
AHCTF1
CLP1
MOB4
TERF2
RNPS1
TMEM147
TOMM20
C2CD4D
THRAP3
MMACHC
HUS1
TRA2B
RFX3
MND1
MT2A
ACOX3
TRMT44
LUC7L2
FMC1-LUC7L2
FMC1
LIG4
ABHD13
MAPK8IP3
NUDT4B
NUDT4
USP19
NIBAN2
UBE2Q1
SPRING1
RNFT2
SCN11A
WDR48
KNOP1
ZDHHC4
FZD1
TMEM167B
SURF6
METTL26
GABPA
ATP5PF
CCDC9
ZNF341
SEC24A
AP3S1
DNAJC27
CFAP20
SYP
APTX
DNAJA1
TMA16
STAT6
ATP5F1B
GSK3A
ITGB3BP
EFCAB7
ANAPC15
TFPT
PRPF31
FBXO28
ZNF337
TMEM39A
WDR43
RFT1
AASDH
PSMD14
GATM
SPATA5L1
SOX5
MRPL45
WDR55
DNAJC22
UMPS
ERCC6L2
FGF1
RSAD1
CT45A3
PNPT1
SETDB1