ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX10144542 | Kasumi-1
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◢ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◢ SRX535453: A-375

◢ SRX535454: A-375

◢ SRX5501657: A-375

◢ SRX5501659: A-375

◢ SRX5501661: A-375

◢ SRX10131662: Bronchial tracheal epithelial cells

◢ SRX10131663: Bronchial tracheal epithelial cells

◢ SRX20436771: DLD-1

◢ SRX20436779: DLD-1

◢ SRX22001291: DLD-1

◢ SRX22001292: DLD-1

◢ SRX22001293: DLD-1

◢ SRX10715331: HCB1

◢ SRX10715344: HCB1

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◢ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX20230567: Ishikawa

◢ SRX20230568: Ishikawa

◢ SRX20230569: Ishikawa

◢ SRX20230570: Ishikawa

◢ SRX20230571: Ishikawa

◢ SRX20230572: Ishikawa

◢ SRX20230573: Ishikawa

◢ SRX20230574: Ishikawa

◣ SRX10144542: Kasumi-1

◢ SRX10144543: Kasumi-1

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX7366779: MCF-7

◢ SRX7366780: MCF-7

◢ SRX7366781: MCF-7

◢ SRX7366782: MCF-7

◢ SRX7366783: MCF-7

◢ SRX7366784: MCF-7

◢ SRX244177: MM.1S

◢ SRX244180: MM.1S

◢ SRX327758: MM.1S

◢ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◢ SRX1637467: MOLT-4

◢ SRX1637469: MOLT-4

◢ SRX1637470: MOLT-4

◢ SRX24723215: MRC-5

◢ SRX24723217: MRC-5

◢ SRX24723219: MRC-5

◢ SRX24723221: MRC-5

◢ SRX2375362: MV-4-11

◢ SRX2375366: MV-4-11

◢ SRX14127531: OCI-AML3

◢ SRX14127532: OCI-AML3

◢ SRX14127543: OCI-AML3

◢ SRX14127544: OCI-AML3

◢ SRX18455086: OCI-AML3

◢ SRX18455087: OCI-AML3

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◢ SRX4023329: T-47D

◢ SRX4023330: T-47D

◢ SRX728779: THP-1

◢ SRX728780: THP-1

◢ SRX9730732: THP-1

◢ SRX9730733: THP-1

◢ SRX9730734: THP-1

◢ SRX9730735: THP-1

◢ CDK9: STRING

WDR74
GSDMD
VAV1
CYB561
TBKBP1
OPRL1
RGS19
CPXM1
ZNF595
ZNF718
DCAF10
TMC8
MEF2C
INTS12
GSTCD
SMG8
FRA10AC1
ARHGAP25
NFE2L2
RPS6KA1
NBEAL2
C3orf86
RAB37
HHEX
DUS1L
DPY19L4
ARSG
SLC16A6
EXOSC4
LGR6
RXRA
NKX6-3
CD33
TPM3
RASAL3
MTRNR2L2
CACNG4
CCDC149
B4GALT7
DMAP1
ARHGAP4
SIPA1
SDE2
ABT1
IL17RE
LAPTM5
DSTYK
FKBP1A
ZER1
CSF3R
ERLIN2
NIBAN3
LST1
NME1
STXBP5
SHANK3
NR1H2
TNFAIP8L2-SCNM1
TNFAIP8L2
TACO1
TCTEX1D1
SIRPB2
ANKRD13D
GFM2
C17orf75
WDFY3
CRACR2A
TCTEX1D4
BTBD19
ZNF384
TACC1
NTNG2
PLEK
TBC1D19
TOR1AIP1
GMFG
SPN
BMS1
NFKB2
TOP3B
GRPEL2
NDUFS3
KBTBD4
POMP
CDYL
USP15
RNF220
CNPY1
STX16
MAN2C1
EIF1AD
BANF1
RPS19
SEC14L1
TMEM154
SCML4
IL16
CALML4
CNPY3
CCDC170
MYO1G
CCAR2
ARHGAP30
TMEM242
CPSF1
UNC13D
SAR1B
TRIM41
LUZP1
GTF2H2
STAT1
NFKBID
ARAP1
HCST
DDX1
ACY3
GALK2
COPS2
IL6R
S100A9
LILRA2
GABPB1
MRPL30
MITD1
ADAM10
STAT6
LIMD2
ANKRD17
ACBD5
SNUPN
RASGRP2
PSMF1
DUSP3
TBC1D10C
CFAP97D1
SIAH3
FFAR3
CCZ1B
ELMO1
USP30
PPFIBP2
NLRP3
SIGLECL1
CCL4L2
TTC4
DENND4B
E2F4
CHRM3
XRN2
ZNF408
ARHGAP1
APPL2
MCTP1
TLR1
CCL19
HIGD2B
BBS4
COX16
ARPC3
HIF1AN
CALR
SEPTIN9
LTB4R
RAD54L2
DUSP6
RGL4
SULT1B1
THUMPD3
RSU1
PIK3CG
NCF4
ARHGEF12
KBTBD2
P2RY8
CBFA2T3
NDUFS7
PEX3
ADAT2
SNAP47
JMJD4
MYL12A
NELFB
LAIR1
ATP2A3
IRAK3
P2RX1
ADRA1A
SIRT4
SDHAF2
CPSF7
TRIB1
FOXI1
TSPOAP1
MTIF2
SNX16
TMA16
DLX4
SLC39A3
LMO2
GHRL
GIMAP1-GIMAP5
GIMAP1
FAM227B
DTWD1
PPP1R16B
PSTPIP1
SNRPD3
GUCD1
IPO4
YWHAB
NEDD9
GPR68
PARVB
NCF2
GTF3C3
CEBPE
LRRC59
AAR2
TM7SF3
AIF1
TSSC4
SCNM1
LYSMD1
TNFRSF1A
SNX10
TMEM41A
CDK5RAP1
NOXA1
RNF149
HNRNPA1L2
AGAP2
JRK
TAF12
TUT1
TRAF3IP3
DNAJC25-GNG10
DNAJC25
TMEM123
ALKBH3
ADPRS
MTMR9
CHCHD5
NOS3
INPP5D
HPCAL1
MRPL58
IPPK
MRPL1
NEK6
GAPT
AURKAIP1
RTEL1
UBXN8
DNAJC2
ZNF622
C1QTNF1
TTI2
NEFL
CASC3
URM1
RASSF5
STAP1
CAMP
GSTO1
LYG2
MAF1
GTF2H2C_2
GTF2H2C
CLTC
TMEM69
H4C12
SLC39A13
CENPC
PIGV
MS4A3
SH3BP2
TGIF2
BPI
DCP1A
H4C14
H4C15
PRKAA1
FERMT3
C12orf57
ZNF391
OSM
MPO
GALNT3
ZNF696
MAP1LC3B2
SEC14L5
POTEH
IFITM2
MLEC
PDE4D
IPCEF1
WDR36
GNAI3
TRPM6
NADSYN1
FAM207A
NOP16
HIGD2A
TRIP4
MRTFA
TPRKB
NOL12
LDB1
GSN
ADA2
CACNA2D4
PMVK
CSNK1G2
KLHL6
SSBP1
BRF2
MRPL40
HIRA
SUPT7L
SLC4A1AP
ANXA2R
VPS26A
CARD8
NR3C1
WDR11
CLEC11A
PEAK3
ALG10B
SNRPB
INTS4
BTBD1
PTPRG
AVIL
STX18
ZNF787
BHLHE40
UNC5B
BEST1
ZMPSTE24
SMG7
TANK
RGS14
MDM4
LARP1
ETV6
APBB1IP
CABP1
NUF2
SCRIB
TBC1D13
ANKRD40
TRABD
RAC2
STING1
CTSG
RAB44
RASGRP4
RPS7
MTRNR2L8
DR1
ARHGEF18
HEXB
MALT1
MS4A7
SDHAF3
CASP8
SLC44A1
POLDIP3
KLHL20
MZF1
ZBTB45
DSCC1
PPIL3
NIF3L1
SLC22A4
MMRN1
VPS13B
ANPEP
EIF3F
WT1
ITGB3BP
EFCAB7
TDP2
ACOT13
PTPN7
SH3TC1
ARHGAP28
UTP3
RNF166
ZNF385A
RGS18
GP6
CSRNP1
FCGRT
C12orf71
PROSER1
NHLRC3
RAB11FIP1
DBN1
WNT16
SF3A3
MICAL1
MAP7D2
ZNF655
TRPM2
GTF2H3
EIF2B1
PRKAG1
TBPL1
CCM2
GPSM3
RNGTT
INTS1
FLOT1
CD300A
MTF2
CCDC77
KDM5A
PARP2
SLC1A5
IRAG2
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
C1RL
GNGT2
ABI3
GNG2
SCN5A
SNU13
MYO15B
ZNF33A
SAMD10
SNRNP200
PRRG2
NOSIP
MLKL
LGALS12
REXO4
RMDN1
DEF6
RGL2
SIGLEC6
GIMAP6
TOR4A
CD244
LAMP1
NMNAT1
LZIC
PHF19
CPA3
BAG6
APOM
FSCN3
ATE1
ZNF565
MRPS18C
HELQ
SIGIRR
ARHGAP27
ARRB1
LAX1
POLI
NLRP12
TGIF1
S1PR4
ST3GAL5
CMTM3
RASGRF2
MED14
ITPKB
ITGAM
PHB2
ARL6IP4
AGTPBP1
PPP1R11
IGFBP7
FBN2
SH3TC2
IL10RB
FBXW4
ZNF581
INO80B
P2RY14
PLSCR1
MED23
SAMD3
WAS
SMIM6
DDX23
IFRD2
HEXIM2
KMT5B
CCNL1
CTNNB1
ZC3H6
FEM1A
TBL3
COPS7B
EIF2D
CALR3
C19orf44
CDCA3
TIMM21
FBXO15
BRWD1
UBC
MRPL21
IGHMBP2
NCBP2AS2
NCBP2
ABCF2-H2BE1
ABCF2
ATAD2
NOTCH2
PPP5D1
CALM3
TSNAXIP1
RANBP10
PPRC1
UNK
PAFAH2
GSPT1
POLR2J3
TMEM11
SOD2
WTAP
TMEM199
POLDIP2
WDR53
FBXO45
TMEM222
SPATC1L
CALM1
GATB
FOXJ3
CLPB
OPA1
SSNA1
ANAPC2
RBL1
CCDC88A
TSN
TOMM22
SPNS1
CALM2
SEC13
MRM3
LRP6
GLOD4
CYCS
ZSCAN22
MRTO4
EMC1
ORMDL3
TCF3
RPL8
COPS8
KBTBD7
TIMM22
UBB
NUP214
SMN2
SMN1
BTRC
CNOT1
PEMT
TMEM115
KMT2D
DOHH
CFAP410
C16orf91
POMZP3
ZNF337
KPNB1
SCAF1
SYMPK
CHMP4B
ST3GAL2
CTDP1
RPS3
MTERF4
BOD1
AP2S1
IST1
WASHC2C
GSTA4
PSMD3
PRCC
FOXA3
CDKL3
RPS20
AHCYL2
PNKD
SNX17
EIF2B4
AAMP
ING3
TSC1
GFI1B
HTRA2
PA2G4
HMGB1
ADPGK
PHIP
TCEA2
CKS2
HEXA
ZNF212
WASHC2A
SMPD3
PEX26
CLEC16A
NAGPA
THRAP3
KCTD9
CDCA2
MRPL24
DDIT4
KBTBD6
RPL22
UBE2B
ZFAND2A
NUDCD1
TTC13
ARV1
TRIAP1
ZCCHC4
UBE2D3
PPP1R12B
ZKSCAN2
ZNF721
PIGG
NXF1
MED15
PKM
ATP5MF-PTCD1
ATP5MF
MCM7
AP4M1
RPS6KB2
RPL18A
RPS28
NDUFA7
ATG14
OSCAR
NDUFA3
TOB2
USPL1
SLC9A1
CRTC2
H2BC21
H2AC20
INVS
ERP44
IPO11
TMEM127
CIAO1
OAZ3
KCTD5
MAD2L1BP
MICOS13
HSD11B1L
H2AC21
C8orf33
RPIA
PANK4
CDC25C
ZNF444
GTPBP2
NPRL2
CYB561D2
WDPCP
NOP14
MDH1
GRK4
GPAM
MAIP1
PPP1R12C
DNAJC11
RPS26
EIF4A2
DIP2A
DUS2
DDX28
FAM53C
TMTC3
CEP290
TRAPPC3
ZW10
CYP51A1
TNFAIP1
IFT20
PHB
BRIX1
SLC35B4
MAPKAPK5
RANGAP1
ATXN2L
UBR2
C1orf159
MXD4
SRSF11
SMG5
RBM42
FUS
UBQLN1
LRRC29
MRPS15
TBRG4
NUP153
CUL4A
ZNF56
RLF
PGBD4
EMC7
KAT7
COMMD1
PINX1
MFN2
HMBOX1
BOD1L1
C19orf53
PSMD11
FBXW11
MRPS35
CCT4
KDM4B
DNAJA3
UBE2Q1
SLC25A19
DCAKD
ADNP
UBQLN4
LAMTOR2
NSFL1C
TAF5
HMGCL
GHITM
BANP
EEF1AKMT4-ECE2
EEF1AKMT4
ALG3
ZFYVE1
TRIP12
FBXO36
PBLD
HNRNPH3
GID4
ATPAF2
CCDC146
PCID2
SPRYD4
LRRC40
STK25
INTS9
DPP9
MMACHC
VPS37A
CNOT7
RIC8B
LUC7L
AP2M1
NOC4L
DDX51
NMT1
TTC33
DOLPP1
ENDOV
CIC
SPTLC1
SP2
MRPL20
SLC33A1
ZNF420
ZGPAT
ARFRP1
PIGU
ZFYVE19
DNAJC17
AHCTF1
HNRNPAB
ACOX3
NTAN1
COMMD9
UCHL5
RO60
TEPSIN
NDUFAF8
TCF12
CSRNP2
RPL29
RCL1
IDH3B
LETM1
RBM6
MTMR2
BIRC5
DNAJB12
STAU1
ABRAXAS2
SECISBP2
LONP1
CATSPERD
TFPT
PRPF31
ARF4
RALBP1
TRMT44
SUPV3L1
SNAPC3
SMARCAL1
GTF3C5
HSP90AB1
GFUS
H1-4
COQ9
CIAPIN1
SART1
RPL12
LRSAM1
ZFPL1
CDCA5
UBL7
H2AX
DDX49
COPE
GTF2I
PHF13
RCOR1
MRPS16
SNRNP70
FDPS
JOSD2
PIK3R3
HSP90B1
GTF2H4
COG2
ZNF749
DCAF8
ARHGAP9
ELOC
RAB5C
ZC3H10
MRPL39
CTU1
TSC2
NTHL1
WASHC5
NSMCE2
DESI2
BOLA1
DCAF1
TRAF7
PARL
WAPL
MARS1
TMEM59
TCEANC2
NDUFV1
CAND1
IP6K2
CBWD5
U2AF1L5
U2AF1
TRAK2
STRADB
CHCHD3
RWDD1
CRBN
PHF12
SOX6
C11orf58
B3GALNT2
CBWD3
METTL25
CCDC59
VCPIP1
C8orf44-SGK3
KLLN
COX7C
PNRC1
SLC7A6OS
PRMT7
SLC24A1
PSMD2
MCU
CANT1
WDR87
SIPA1L3
TRMT61B
SLC3A2
THYN1
ACAD8
PABPC1
SKIV2L
NELFE
PLEKHM3
ATF4
PRKACA
BICD2
USP48
METTL9
GUSB
POLG
SMIM13
PTEN
SIRT2
NFKBIB
MANF
SSR3
RCOR3
ZNF500
TARBP2
FAM149B1
ECD
ZNF148
PSMD4
TIMM13
NDUFB5
MRPL47
THOC6
HCFC1R1
FAM228B
CCDC90B
RPS16
RUVBL1
UBE3B
KCTD10
NOLC1
GFM1
COQ7
RPLP1
TRUB1
VIRMA
ASXL1
TMEM217
TBC1D22B
SERBP1
SESN1
CMTR1
UBA52
PCBP2
COA6
TFRC
NKIRAS1
EIF4A1
CDKN2AIPNL
DNM1L
POLR2E
NLK
RFXANK
BORCS8-MEF2B
BORCS8
ZC3H3
H2BC18
CFAP20
HAGH
FAHD1
COPS7A
HPS4
RPLP0
NDUFAB1
LARS1
CAPN10
H4C11
NEURL2
CTSA
CACTIN
BUB3
XRRA1
SPCS2
SRP68
KAT8
SPRED1
WBP2
ATRIP
REXO1
BUB1B
ACTR1A
PARK7
ZNF518A
CLP1
TMEM230
H3C13
SF3B2
VCP
FAF1
PTDSS2
CWC25
CBWD6
KMT2B
SLC4A2
SLX1B
SLX1A
BOLA2B
BOLA2
WDR25
WARS1
RNASEH2C