ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX22001292 | DLD-1
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◢ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◢ SRX535453: A-375

◢ SRX535454: A-375

◢ SRX5501657: A-375

◢ SRX5501659: A-375

◢ SRX5501661: A-375

◢ SRX10131662: Bronchial tracheal epithelial cells

◢ SRX10131663: Bronchial tracheal epithelial cells

◢ SRX20436771: DLD-1

◢ SRX20436779: DLD-1

◢ SRX22001291: DLD-1

◣ SRX22001292: DLD-1

◢ SRX22001293: DLD-1

◢ SRX10715331: HCB1

◢ SRX10715344: HCB1

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◢ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX20230567: Ishikawa

◢ SRX20230568: Ishikawa

◢ SRX20230569: Ishikawa

◢ SRX20230570: Ishikawa

◢ SRX20230571: Ishikawa

◢ SRX20230572: Ishikawa

◢ SRX20230573: Ishikawa

◢ SRX20230574: Ishikawa

◢ SRX10144542: Kasumi-1

◢ SRX10144543: Kasumi-1

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX7366779: MCF-7

◢ SRX7366780: MCF-7

◢ SRX7366781: MCF-7

◢ SRX7366782: MCF-7

◢ SRX7366783: MCF-7

◢ SRX7366784: MCF-7

◢ SRX244177: MM.1S

◢ SRX244180: MM.1S

◢ SRX327758: MM.1S

◢ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◢ SRX1637467: MOLT-4

◢ SRX1637469: MOLT-4

◢ SRX1637470: MOLT-4

◢ SRX24723215: MRC-5

◢ SRX24723217: MRC-5

◢ SRX24723219: MRC-5

◢ SRX24723221: MRC-5

◢ SRX2375362: MV-4-11

◢ SRX2375366: MV-4-11

◢ SRX14127531: OCI-AML3

◢ SRX14127532: OCI-AML3

◢ SRX14127543: OCI-AML3

◢ SRX14127544: OCI-AML3

◢ SRX18455086: OCI-AML3

◢ SRX18455087: OCI-AML3

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◢ SRX4023329: T-47D

◢ SRX4023330: T-47D

◢ SRX728779: THP-1

◢ SRX728780: THP-1

◢ SRX9730732: THP-1

◢ SRX9730733: THP-1

◢ SRX9730734: THP-1

◢ SRX9730735: THP-1

◢ CDK9: STRING

H4C11
GSTA4
H4C12
H4C14
UBC
FLOT1
KLF6
H3C2
HEXIM2
WDR74
H1-4
CALM2
EIF2D
DCP1A
H2BC11
H2AC11
CCDC200
H4C15
ERRFI1
PRDX1
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
H3C15
H3C14
KMT2A
H4C5
EEF1A1
CDC25C
FAM53C
ZBTB4
POLR2A
KRT19
AREG
EREG
H4C3
H2BC21
H2AC20
H2AC21
H2AC19
H2AC18
ZFAND5
GTF2IRD2
SLC9A1
MTHFD2
ARPP19
H2BC18
H3C13
PKM
VRK2
HEXB
ID2
GAPDH
TRIB3
H2BC4
H2AC6
CITED2
ARHGAP32
PMAIP1
PPP4R3B
DRG2
EGLN1
CCN1
NUCKS1
H1-2
INO80D
STX16
TMEM242
CALM1
ZC3H11A
BCL9L
H2BC17
H2AC17
C17orf75
TMEM68
TGS1
VWA8
ZER1
ZCCHC3
ACYP2
DCAF10
GTF2H2C_2
GTF2H2C
GTF2IRD2B
TOB2
RBM39
ZNF341
SYDE2
H4C1
H3C1
POLR3D
NRL
PCK2
PERP
EPCAM
RHOB
ACSF3
RCOR3
PTBP1
AAR2
MKNK2
MED23
H2AX
GTF2H2
TMSB10
GEMIN7
PRSS23
H3C7
H2BC9
LAMA3
GDF15
PLEKHM3
TPD52
H4-16
AMOTL2
KRT8
PRSS22
SRSF2
MFSD11
SRSF6
NABP1
JUNB
CIRBP
STX18
IST1
ZNF518A
TUBGCP3
NFKBIA
TRA2B
ELOB
SDC4
SMAD3
RPL18A
TBC1D22A
BUD13
MIER1
TP53BP2
HNRNPA3
DHRS13
FAM227B
DTWD1
TMA16
P4HA1
TPI1
C5orf24
ARHGEF35
GBA
LATS1
MYL12A
ANXA4
TACSTD2
UBE3C
PPFIBP2
DDIT4
GTF2A2
TBC1D14
TRAM2
ADPRHL1
MAPKBP1
ETS1
PRAG1
RPL10A
SRSF3
DMTF1
H2BC12
H2AC12
KRT18
MRPL44
SRCAP
LOC730183
ZNF143
H3C4
FAM136A
GADD45B
KNTC1
NFIB
HIC2
INO80
GRHL3
PSMD8
ZNF410
HMGN2
RORA
CTNNB1
SLC24A1
RTN4
MANF
SLC44A2
ARL15
KEAP1
SIPA1L1
TNFSF15
HRH1
USP30
CASC3
MPHOSPH10
MCEE
PRRC2A
SNX5
MGME1
COX18
KIF21A
ZNF609
TBX3
MTF2
MTMR2
ZMPSTE24
SAR1B
RNF220
ZC3H12C
FRA10AC1
GTF3C2
XPO4
PHKB
ITFG1
PIAS3
CFL2
SKIDA1
CRIM1
RBM25
TM2D1
DDX6
H3C11
KANK2
H4C13
NDUFS7
RMDN2
PFKFB3
NFYC
GET4
ZNF292
NOXA1
TUBA1B
TRIB1
DYNLL2
ADAP1
PPIA
RAD54L2
EIF1
DNAJC19
UGP2
TBC1D19
MTCH2
DNPH1
MRPL21
IGHMBP2
EIF4A3
ATP8B1
AFF1
C1orf53
ITGB1
EIF4G1
LSM14A
CHAC1
LDHA
RFT1
RHBDD1
SPTAN1
RNF146
POLR3H
TGFB2
NIPSNAP2
TRDMT1
CREBL2
ZBTB37
FAM162A
CCDC58
ATF4
DUS1L
PDF
USP3
ZNF706
DARS1
USP24
GFER
KDM7A
MCL1
WDR31
TBL1XR1
NFKB1
UBE2J1
ZFAND6
ANKRD18A
FECH
GTF3C5
UBE2S
KMT2E
ARID1A
SUCLG2
MTA3
IER3
TFF1
MAIP1
H4C4
RGS3
DOCK7
KLHDC9
TATDN3
NSL1
TERF2
TMEM106B
H2BC15
H2AC15
SYK
MLLT10
NIBAN2
HUS1
TOB1
PDCD2
PKP4
SMIM19
SLC20A2
VHL
DENND6A
VPS54
TJP1
LAMP1
SLC25A51
MEMO1
HILPDA
ZBTB45
COMMD1
MTIF2
TRIP11
TJP2
LEPROTL1
GATA6
ELF3
TMEM222
INTS12
GSTCD
RPL5
HSPA5
ATG5
SEC11A
PSMA1
KAT6A
ZDHHC17
EBAG9
TM2D2
ADAM9
SVBP
ERMAP
EPB41L4B
NSF
SLC39A14
RBM43
IL20RA
KMT5B
ZCCHC4
SUPT4H1
ZNF76
SMC5
YWHAH
REL
RAPH1
BCL9
NUF2
MYLIP
ANKRD40
ACTB
EIF4G2
STAG1
SAV1
FUT4
C15orf61
VARS2
PARP9
DTX3L
HMGB1
WDR11
ZSWIM7
TTC19
ZNF770
HOMER1
CDH1
PCBD1
ARHGEF38
MRPS31
STMP1
ZNF286A
HNRNPF
CREBZF
FANCL
CAV1
RPS3
NME1
PSMC1
PAIP1
SHB
SH3RF1
CMTM8
DLX4
FOXJ3
SEC13
AURKAIP1
PSMF1
REXO4
ZFP62
H2BC5
LNPEP
GADD45GIP1
TGFA
ZBTB38
SEC24D
EPN2
TMEM41A
KATNBL1
MRPL1
UFL1
PCBP1
AAK1
RALGAPA1
MTERF4
HERPUD1
IPO9
RABGAP1
BTG1
NFAT5
USP34
MTHFD1L
EZR
SMCHD1
AHR
UBE2E3
SPRY2
LRP6
UBE2V2
CHMP6
H4C2
DISP1
DEK
CEBPA
CEBPB
WSB2
ATP5MF-PTCD1
ATP5MF
BRIX1
MRPL3
CIAO3
SLC25A3
CSKMT
C11orf98
KDF1
MTHFS
PDE2A
USPL1
EIF2S2
CDC73
FRG1
SLC35A3
HEBP2
NUDT4B
NUDT4
TMEM45A
ARHGEF5
ARHGAP45
CLU
KLRC2
SOD2
WTAP
EIF4A2
KIAA0232
FUT11
ARL5A
SNTB2
SOCS1
IGF2R
PSMC6
ACOT2
EIF4A1
CGGBP1
EXOSC8
C3orf38
TACC1
KAZALD1
PXT1
KCTD20
SP1
TCF20
PAK6
IRS1
TM4SF1
SRSF1
PCNX4
H1-3
XBP1
NAPEPLD
KCTD11
DBF4B
RPL13
SLC38A2
THEM4
RNF6
AKIRIN1
PTDSS1
MTERF3
ANKRD36C
TUBA1C
BRD2
SENP6
PIK3R1
PRDM5
CASD1
ALG13
ZNF562
TMCO4
FUS
ARF6
NELFB
MAP2K2
UBA2
TMEM216
CPPED1
CD55
SMG6
DCUN1D2
SRR
ZYX
CDC25B
PGM1
CENPB
NRP1
PHLDA2
SLCO1B3
NSFL1C
SMIM12
YWHAQ
SLC44A1
SNX16
METAP2
PYGO2
LOC101928120
EXD2
STX6
RRP1B
HSF2BP
FTH1
PSKH1
PHLDA1
H1-5
TMEM17
BCAR1
DR1
RPS5
LTBR
SELENOT
SOCS5
BAZ1B
TEX22
DLC1
DSG2
STAT5B
TRIM3
SYT8
MAD2L1BP
CCT4
MDM4
RPL6
PTPN11
ELF2
KDM1A
ZNF623
SP3
THBS1
DCLRE1B
AP4B1
ERN1
MTHFD2L
ZFHX3
ISG20
SRXN1
F3
SYNJ2
MOV10
HTRA2
KLLN
PTEN
PCBP2
GALE
RABGGTA
UPF2
UGDH
RANBP9
FOXJ2
VWA7
POR
NUDCD3
SLC39A13
HEXIM1
XRCC5
AGPS
PGGT1B
SRSF4
ITGAV
LSR
C4orf36
RPL19
EPM2A
NIPA1
CCNI2
COPS7B
BOD1L1
SNAP47
JMJD4
TVP23B
SNRPC
AKAP10
RCC1
OAT
FH
EPG5
SLC25A37
GSK3B
LRP2BP
ANKRD37
DLAT
TNFSF9
SMARCA4
PSME4
PRKCE
CRYBG1
PRTFDC1
ZC3H6
SRP68
ARFGAP2
RPL37
ARL6IP1
TSPAN10
NPLOC4
PHF3
SNRPG
STK40
PPP1R16A
PDS5B
PAK1
KDM4B
SRSF7
VPS45
TUBB4B
EMC4
INTS6
HECTD2
ZNF621
ZAR1L
BRCA2
PBK
SGK1
TESMIN
ICMT
MYO1B
LAMC2
SCRN1
CLSTN1
TMPRSS13
TRIP4
TCF12
DPY19L4
MOB3A
IZUMO4
POLDIP3
AVPI1
WIZ
RBM45
KIF22
BLOC1S6
OCIAD1
TTC26
CEP135
ZNF185
SLC39A10
CHAMP1
ZNF276
FGGY
RNF135
MPP5
VPS9D1
TIA1
RHOG
YAP1
SMURF2
EP400
DPY19L1
DMAP1
GMFB
ERCC6L2
LEMD3
SCFD1
MARCHF7
PLK2
SMAGP
SCAP
NDST2
ACTG1
CELF1
ZBED8
ZSCAN9
DCK
UEVLD
DPYSL2
DNAAF2
ABCA5
H2BC13
H2AC13
PTPMT1
PFKL
MYO5A
CTDSP1
XRRA1
SPCS2
NDUFC2-KCTD14
NDUFC2
HSPA9
STK11
H2BC7
H2AC7
ZNF236
SH3D19
H2BC14
H2AC14
TNKS1BP1
TOMM22
ARHGEF12
EXOSC4
LRRC37A3
DDX59
ATL2
REPIN1
TMEM168
UBE2F
IMPACT
KIF5B
SRD5A3
UGCG
FAIM
DMXL2
SGTB
NLN
AGR2
DCAF8
TACO1
DGAT1
COMMD2
ADK
RBL2
TTI2
COPS3
PTPDC1
COMMD10
RICTOR
TM9SF3
GOLM2
E2F7
DGKZ
SGPL1
PRELID2
PPP1R18
PAFAH2
KMT2D
PEX3
ADAT2
NXF1
DIP2A
MRPS15
SURF6
CCNC
YARS1
S100PBP
KLHL12
RPS8
IPO4
RPS14
DYRK1A
LRBA
SQSTM1
MTMR10
MFAP3L
LYPLAL1
TAF4
H3C10
CCDC88A
VIRMA
ATR
ZNF740
CSAD
ZC3HC1
RRP8
ILK
ZNF692
INTS10
HLCS
ZNHIT6
NADK
PNMA1
PARD3B
SCRIB
METTL9
EEF2
USP21
DLST
NFKBIZ
SLTM
ATIC
RFESD
CDC16
FAM20B
PTBP3
L3HYPDH
JKAMP
GPR39
WWP1
BRF2
IPO7
C6orf226
TIGD1
EIF4E2
EXOSC6
RRM1
UBE2Z
STAMBPL1
SDCBP
MED18
PPIG
NDRG1
SF1
STK38L
SHTN1
DYNC1LI2
HINT1
ANKEF1
ATPAF1
MET
UPF1
SPOPL
AIFM2
ZNF579
ALDH7A1
KBTBD11
CLTC
EIF3F
ZFAT
LRCH4
FBXO24
MRPL48
NELFA
EFCAB2
CRLS1
MAT2A
RPL11
HNRNPR
ARFGEF2
GNAI2
INTS5
PABPN1
NUDT9
ZC3HAV1
ZCCHC17
SNRNP40
PDIA3
MT2A
SKA2
PRR11
FAM168B
MCTP1
SNX9
SORBS3
MRPL39
EIF2B5
RFX3
DYNLL1
PPP1CC
UBE2L3
NKIRAS2
DGUOK
RHBDD3
EWSR1
SRSF9
DNAJC7
H1-0
SIK2
THEM6
GSAP
ARHGAP27
SMN2
SMN1
RAD52
PCIF1
H3-3B
TXNDC15
CRK
DHX9
POLR3G
MBLAC2
RMC1
ZNF699
SURF4
EFNB2
FAM47E
SCARB2
DSTYK
UBQLN1
C2orf42
LEMD2
YTHDF2
KLHL18
KIF9
MRPL27
EME1
CSDE1
KRT80
GLRX2
PPM1A
ACACA
SNX25
GCLM
PRPF39
CAPN2
KATNAL2
CFAP97
PIAS2
ZYG11B
CDC42EP1
TMEM54
TRIM6-TRIM34
TRIM6
PPP5D1
CALM3
TSN
NUTF2
CENPT
COMMD4
MFAP3
FAM114A2
DYNC2I1
MLEC
MAPK8IP3
MAZ
PPP3CB
ZDHHC7
KRCC1
ZNF627
TRNAU1AP
HMGA1
SCP2
N4BP2
CHMP4C
KCTD3
GPRC5A
GSTP1
DDAH1
ADGRG6
RAN
SMAD1
IRF2BP2
STK3
CFAP92
BACE2
TXNRD3
LPAR2
SPATA12
TBRG4
SF3A3
RASEF
LANCL2
ADSS2
ATAD3A
UBXN4
RAD23B
C2CD5
APOLD1
KXD1
ULK3
RSPH3
KIZ
ZSCAN26
RABEP2
EIF4H
PALD1
FAM160B1
KPNB1
RAB1A
NCOA3
UBR4
PELP1
PARP2
ATP5F1A
SIRT4
VCPKMT
TMBIM4
EEA1
RBMXL1
KYAT3
MTIF3
KCTD18
SIRT1
FUT8
PIP4P2
FEZ2
MYCL
ETV4