ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX2375366 | MV-4-11
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◢ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◢ SRX535453: A-375

◢ SRX535454: A-375

◢ SRX5501657: A-375

◢ SRX5501659: A-375

◢ SRX5501661: A-375

◢ SRX10131662: Bronchial tracheal epithelial cells

◢ SRX10131663: Bronchial tracheal epithelial cells

◢ SRX20436771: DLD-1

◢ SRX20436779: DLD-1

◢ SRX10715331: HCB1

◢ SRX10715344: HCB1

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◢ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX20230567: Ishikawa

◢ SRX20230568: Ishikawa

◢ SRX20230569: Ishikawa

◢ SRX20230570: Ishikawa

◢ SRX20230571: Ishikawa

◢ SRX20230572: Ishikawa

◢ SRX20230573: Ishikawa

◢ SRX20230574: Ishikawa

◢ SRX10144542: Kasumi-1

◢ SRX10144543: Kasumi-1

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX7366779: MCF-7

◢ SRX7366780: MCF-7

◢ SRX7366781: MCF-7

◢ SRX7366782: MCF-7

◢ SRX7366783: MCF-7

◢ SRX7366784: MCF-7

◢ SRX244177: MM.1S

◢ SRX244180: MM.1S

◢ SRX327758: MM.1S

◢ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◢ SRX1637467: MOLT-4

◢ SRX1637469: MOLT-4

◢ SRX1637470: MOLT-4

◢ SRX2375362: MV-4-11

◣ SRX2375366: MV-4-11

◢ SRX14127531: OCI-AML3

◢ SRX14127532: OCI-AML3

◢ SRX14127543: OCI-AML3

◢ SRX14127544: OCI-AML3

◢ SRX18455086: OCI-AML3

◢ SRX18455087: OCI-AML3

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◢ SRX4023329: T-47D

◢ SRX4023330: T-47D

◢ SRX728779: THP-1

◢ SRX728780: THP-1

◢ SRX9730732: THP-1

◢ SRX9730733: THP-1

◢ SRX9730734: THP-1

◢ SRX9730735: THP-1

◢ CDK9: STRING

NLRP12
WDFY3
GATA4
SPATC1
LAMP1
CDCA3
NFKB2
MEF2C
WDR74
PLSCR1
XRCC5
ABT1
GNG2
GSTA4
CMPK2
FEM1A
TLR4
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
CALR3
C19orf44
PGK1
ADAM28
SMPD3
RPS19
STEAP4
UBXN8
PDLIM2
PTK2
NUDCD1
BOD1
NUTM1
NOP10
APOL6
RNF149
NIBAN3
H4C11
IFRD2
ZNF221
H4C12
NEDD9
CD1A
DOCK8
PEX12
DCAF12
GBA
NR3C1
H4C3
TMEM91
B9D2
DDX58
TMTC3
CEP290
NBN
KBTBD6
ASGR2
SCNM1
LYSMD1
PPP1R12C
GHRL
CTU1
MTMR9
NUDT4B
NUDT4
RPS20
H2BU1
H2AW
HMBOX1
INTS9
MS4A3
CLPB
ZNF780A
ZFYVE1
ZNF444
SH3BP2
TMEM115
FBXW4
VCPIP1
C8orf44-SGK3
MINDY3
ZSCAN30
DYNC2H1
TASL
SIGLEC6
MRPL24
TRIM41
EXD1
CHP1
NDUFS7
EXOSC4
TSNAXIP1
RANBP10
MICOS13
HSD11B1L
CD33
NUF2
SPRED2
PANK4
PEX3
ADAT2
LTB4R
RUBCNL
H4C14
H4C15
ST3GAL2
RAB4B
NBEAL2
SLC1A5
H4C9
IPCEF1
KBTBD7
MRPL30
MITD1
MMACHC
MEFV
PAFAH2
BTRC
TPRKB
PROS1
ZNF225
RFX1
CHMP4B
PNKD
AAMP
BRF2
MTF2
PPRC1
MRPS18C
HELQ
PLEKHM3
DDX18
DENND3
CCDC152
TYROBP
TMEM243
GSPT1
TRIP4
BAZ1A
RMND1
ARMT1
CCDC200
RAB39A
TOR1AIP1
H2BC18
H3C13
ZNF226
FIGNL2
FOLR2
P2RY14
TM6SF1
AP2S1
ALOX5AP
KRR1
INVS
ERP44
CCAR2
CARD8
RMDN2
ARHGAP25
PHB
EHD1
RAC2
NDFIP2
MED23
KANSL3
COPS7A
BANK1
IL1RN
NCF2
DISC1
YES1
PEMT
FRG1
CTTN
ENOSF1
TAF1B
ARID5A
CCER2
STAP1
ICAM1
POMP
GRPEL2
CCDC146
CLEC10A
NME7
BLZF1
TAL1
INSC
JOSD2
INPP5D
SIGLEC1
ZSCAN22
PRCC
DCP1A
ZCCHC4
ANKRD18B
FAM227B
DTWD1
UTP3
ITGA4
PGBD4
EMC7
FLOT1
RIPK1
INTS12
GSTCD
PRRG2
NOSIP
LRRC37A3
AURKAIP1
NOTCH1
AHCYL2
WASHC4
TBC1D19
RPS7
FBXO46
VPS26A
PRKCE
LILRA2
SMC6
GEN1
VAV1
ASPHD2
PARP10
FRA10AC1
GATB
TEFM
MTIF2
SHISA5
TTC33
GALK2
COPS2
ARPC3
IPPK
GABPB2
ERLIN2
OBI1
CTSG
RFFL
RAB27B
CA13
PPP6R1
USP3
TMEM154
RPL6
UBR1
SSBP1
DPY19L4
SYMPK
FOXA3
PEAK3
SF3A3
CCDC149
SSBP2
DR1
PPP1R12B
TBPL1
RPL5
BORCS7
FASTKD1
LCE3A
TMEM68
TGS1
TNNI2
TSSC4
VPS13B
LMO2
PHF12
DDX1
H3C3
RPS6KA1
CRTC2
DHX8
ZAR1L
BRCA2
PIK3CG
RBBP5
ZC3HAV1
GTF2H2C
GTF2H2C_2
MRPL42
RNPEP
H1-3
SCRIB
RPGRIP1L
FTO
NDUFB7
PPP1R11
CEACAM21
SPATA24
BNC2
SLC35B4
ZNF268
CSF2RB
NSMAF
ANXA2R
RPIA
CARD19
IRF9
FAM133B
BCL2L13
ARHGEF18
FAM228B
SF3B6
PTK2B
TRIM35
TACC1
GTF2H3
EIF2B1
FAM167A
TMEM11
MRPL48
PCBP2
LSG1
ZNF224
LCMT2
ADAL
DPY19L3
PPIP5K2
ZNF554
SECISBP2L
TCTEX1D1
ZBTB45
CCR1
PLCXD2
SEC14L1
INO80D
ALG10
MRPL1
CCDC88A
TTC14
NINJ2
DSTYK
ZNF350
SLC24A1
CDK5RAP2
RALB
NUCB1
CAVIN2
CHCHD5
ZNF56
CCDC90B
SLC1A4
APPL2
FUT10
ZNF175
SDSL
HCK
PPM1M
TMEM242
POLR2J3
PARP2
USF1
ZC3HC1
TMEM229B
PLEKHA4
GFUS
IDH3B
JRK
SLC39A13
ADAR
PSMF1
SIRT2
NFKBIB
PEX2
H4C4
STING1
SNX17
EIF2B4
SLC9A1
TACO1
TFPT
PRPF31
MRPS23
MARCHF5
CPEB3
STX7
CCDC9
SMG6
CD93
ZNF235
PSMA8
COMMD2
PCM1
CHMP7
TTI2
GNB4
TMEM222
H1-4
HUS1
KDM1A
H2BC5
TSC1
GFI1B
AQR
UBR2
LARS1
BRWD1
PIGV
ZNF518A
SLC37A2
NME1
RPL37
UBE4A
ANKRD40
INKA2
DDX20
ZNF286A
EIF2D
RIC8B
SUPT7L
SLC4A1AP
PPP5D1
CALM3
SIRT4
PSMD9
HPD
BCL2A1
GTF2H2
NFX1
ACTR3
MCUB
CCNL1
HMGB1
USPL1
ZNF846
RBCK1
TCEA2
KLHL20
ARHGDIB
FOXP1
ZBED4
MPG
ORC2
GAS6
SCAF1
SCAMP4
ADAT3
INO80C
MORF4L2
H1-2
TATDN1
NDUFB9
POLE4
HERC6
CTNNB1
ZC3H6
TRDMT1
RRS1
HIBCH
H4C8
SLC22A18
SAR1B
SPOP
TRIP12
FBXO36
SIRT6
ANKRD24
KDM3A
MED4
N4BP2L2
INTS10
TNFAIP1
IFT20
USP15
SLC44A1
POLDIP3
GOSR1
PPP3CC
PRIM2
ALG10B
MALT1
C1orf159
MKRN3
BOLA1
ZNF148
ING4
MRPS31
GFOD2
TRIM69
TMEM41A
SLC45A4
MOB4
EMC4
RXFP1
CWC25
NUFIP2
DCAF10
SETDB1
H3C7
H2BC9
SLC35E2A
MARCHF6
PSMC1
DDX23
FBXW11
FBXO28
ESCO2
BNIP1
PLEK
ANKRD22
VPS50
HEPACAM2
PPIL2
TVP23B
TMBIM4
PSMA1
DRAP1
C11orf68
SLC22A16
TIGD6
HMGXB3
MYL12B
CCNC
MBNL1
ASH2L
DSCC1
RPL27
MRPL27
EME1
MYBPH
TPR
ODR4
AOAH
CAMP
GTF2H4
ARMH3
THAP1
CNPY3
DENND4B
H4C5
COX7C
TATDN3
NSL1
ZMPSTE24
TXNDC15
ALDOA
ZNF212
ZNF420
NUDT13
UBLCP1
RNASE10
CCDC124
C12orf57
COPS4
ZNF331
ZNF180
POLR2M
COX7A2
ZNF574
METTL3
ZNF76
FNTA
CYP4V2
MRPL34
SPIDR
TFEC
CDK5RAP1
ARL8B
TSG101
CCDC114
TSSK6
NDUFA13
ORMDL3
DRG2
CBLL1
PTGS2
RPS15
USE1
LSM8
H4C1
H3C1
BAZ2B
BMS1
MICU2
PRPF18
BANP
ARHGEF1
UTP23
H3C2
HDDC2
MCTP1
S100B
METTL25
CCDC59
WASHC5
NSMCE2
E2F4
DOHH
TFEB
VTA1
NMBR
OPA1
N6AMT1
RABGGTA
NOTCH2
LUC7L2
POLR3B
SASS6
FMC1-LUC7L2
FMC1
TRIB1
C1QA
RBM45
RAB11FIP1
NFKBIA
METTL6
EAF1
TESPA1
BRIX1
ARHGAP9
MARS1
PCNP
RASA1
RAB3GAP1
ZNF749
C18orf21
NUDT7
RPL29
SUGT1
MAGOHB
CDIPT
ETV6
TCF3
MRPS15
KMT2B
PRKCI
CNTRL
UNC45A
H4C6
MAPK1IP1L
LYNX1-SLURP2
LYNX1
COX18
ZKSCAN4
SH3TC1
SIGLECL1
PEX26
ZNF557
WNT2B
ADPRS
VIRMA
MRPL3
NEK4
TTC13
ARV1
ZCWPW2
AZI2
H3C8
TLR1
TOP3B
MRPL16
MRPS10
PSMC6
MRPL44
ZNF410
DGAT1
PDCD6IP
RPL23
TMCO1
C19orf53
YIPF2
TIMM29
COMMD4
HARS2
HARS1
TTC26
R3HCC1
P2RY6
KRT36
WDR70
THEM4
SGF29
TIMM21
FBXO15
SLC7A11
NDUFS3
KBTBD4
NUP54
SDHAF2
CPSF7
POLI
MX1
APOBR
LTN1
RUFY3
PTPN12
FBP1
NCF4
PRKCSH
CCDC151
UBE2F
VRK2
ZSCAN31
AVIL
NSFL1C
ELOC
POLE3
C9orf43
TMEM65
EIF2B3
TBC1D13
C8orf37
DNAJB12
SFSWAP
RPL31
ERCC1
LIN37
HEATR5A
KMT2E
BECN1
H4C2
F2RL3
CCNI
UFSP2
RPL17-C18orf32
RPL17
CCDC107
SULT1B1
FAM160A1
LY9
IFI6
PDSS1
GDAP1
SLFN12L
NKAPL
RASSF5
TNFRSF10A
SMC1B
RIBC2
STX3
MTERF4
H2BC21
H2AC20
H2AC21
RFX8
NPRL2
CYB561D2
WDR24
RPL11
MTPN
LUZP6
VPS25
TBC1D5
HENMT1
SLC25A23
PSMB8
UNK
THOC1
EEF2
TNFAIP8L2-SCNM1
TNFAIP8L2
RCOR3
ZNF3
SLC25A32
DCAF13
MTERF1
ANKRD13D
EIF3H
IKZF1
CD72
RAD23A
ASB6
CHD1L
PRKAB2
MED18
POGLUT3
FLT3
C10orf88
CCM2
SMARCA2
SLC33A1
MSL2
RPL36
TSFM
GSK3A
LIN54
WDFY1
ARHGAP24
MAIP1
DESI2
RAD54L2
ARL14EP
HINT3
NUDT2
KIF24
RFESD
CPQ
H3C11
EFCAB2
ACBD6
ZC3H4
EIF1B
RPL7A
MED22
PSMB7
RFX2
GPAT3
SERP1
EIF2A
PPCDC
NACA
EIF3G
PPP2CB
NUP153
TARBP2
MARCHF7
CAB39
FBXO34
LST1
RNASE2
USP30
H3C15
H3C14
UBE2V2
TMEM101
TIMM10
EIF3F
EXOSC3
ZNF408
ARHGAP1
BSDC1
CFAP298-TCP10L
CFAP298
TRIM44
IQGAP2
DNAJB2
TOMM22
SNRPE
FBXW7
CDC73
TRAM1
SNUPN
ZNF573
SUGP1
MAU2
SNF8
KATNBL1
H2BC12
H2AC12
RIPK2
RASSF2
ARL11
WDR87
SIPA1L3
NFE2L2
MTMR6
ZNF333
PIGL
RPF1
NTAN1
AP1G1
TM2D1
METTL18
C1orf112
SNX14
RGS14
C1RL
KASH5
TFB2M
CNST
STAMBPL1
KAZALD1
HIGD2B
BBS4
RPRD2
DBN1
C12orf43
VKORC1
CAPN15
TMEM123
MTBP
MRPL13
PIGBOS1
PIGB
HCLS1
HEXIM2
CMTR1
MCOLN1
RFX3
C1orf53
CRADD
DOCK2
GPR141
RBM28
RRP15
NDUFB3
FAM126B
SEC22B
CGAS
ATP2B4
ZC3H11A
GOLGA3
NCBP3
PLAGL1
OR8G2P
ATAD2
SMARCAL1
FBXL19
HEATR1
KMT2C
MAPKAPK3
CISH
NAGA
MED15
GABPB1
SNRPB
VAMP8
ZNF527
VIPAS39
AHSA1
TERF2
MRPS33
E2F6
ATAD2B
KCTD18
MS4A14
CCDC77
KDM5A
SH2B1
TUFM
AP2B1
ATP13A1
ZNF337
UHRF2
LOC112694756
CCL3
LARS2
IFIT1
AFF3
SYCP1
CCPG1
C15orf65
VPS29
RAD9B
THOC5
OCIAD1
UEVLD
H2BC8
H2AC8
LAPTM5
DTNA
IFI35
RPL38
REXO5
ERI2
DMTF1
TRIM25
FAM200B
CCZ1
RPS3
RPP14
HTD2
TTC4
KLLN
PTEN
C17orf75
DMAP1
PLD3
RPL37A
RPS9
C2CD5
ZNF155
RSU1
AARS2
SNRNP200
IL4I1
STAM2
TMEM259
PGM2L1
MFSD3
H1-5
H2AC16
NAIP
ING3
UBQLN4
LAMTOR2
ELOB
LTBR
RPS15A
CENPH
FKBP5
HMGN1
SP140L
ANKRD17
SRSF7
JMJD1C
INO80B
FPR1
RUVBL1
PPP6C
RAB3C
TNPO1
C1orf74
IPO4
NELFB
TRIM28
OAS2
ZW10