ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX244177 | MM.1S
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◢ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◢ SRX535453: A-375

◢ SRX535454: A-375

◢ SRX5501657: A-375

◢ SRX5501659: A-375

◢ SRX5501661: A-375

◢ SRX10131662: Bronchial tracheal epithelial cells

◢ SRX10131663: Bronchial tracheal epithelial cells

◢ SRX20436771: DLD-1

◢ SRX20436779: DLD-1

◢ SRX10715331: HCB1

◢ SRX10715344: HCB1

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◢ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX20230567: Ishikawa

◢ SRX20230568: Ishikawa

◢ SRX20230569: Ishikawa

◢ SRX20230570: Ishikawa

◢ SRX20230571: Ishikawa

◢ SRX20230572: Ishikawa

◢ SRX20230573: Ishikawa

◢ SRX20230574: Ishikawa

◢ SRX10144542: Kasumi-1

◢ SRX10144543: Kasumi-1

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX7366779: MCF-7

◢ SRX7366780: MCF-7

◢ SRX7366781: MCF-7

◢ SRX7366782: MCF-7

◢ SRX7366783: MCF-7

◢ SRX7366784: MCF-7

◣ SRX244177: MM.1S

◢ SRX244180: MM.1S

◢ SRX327758: MM.1S

◢ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◢ SRX1637467: MOLT-4

◢ SRX1637469: MOLT-4

◢ SRX1637470: MOLT-4

◢ SRX2375362: MV-4-11

◢ SRX2375366: MV-4-11

◢ SRX14127531: OCI-AML3

◢ SRX14127532: OCI-AML3

◢ SRX14127543: OCI-AML3

◢ SRX14127544: OCI-AML3

◢ SRX18455086: OCI-AML3

◢ SRX18455087: OCI-AML3

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◢ SRX4023329: T-47D

◢ SRX4023330: T-47D

◢ SRX728779: THP-1

◢ SRX728780: THP-1

◢ SRX9730732: THP-1

◢ SRX9730733: THP-1

◢ SRX9730734: THP-1

◢ SRX9730735: THP-1

◢ CDK9: STRING

IFRD2
PHB
BOD1
TMEM115
TCEA2
TMTC3
CEP290
CLPB
PAFAH2
FASTKD1
CALR3
C19orf44
SMPD3
ORMDL3
CCP110
PPRC1
PNKD
AAMP
ZNF225
PPP1R12B
CLEC16A
INVS
ERP44
COX7C
DDX23
PANK4
SCNM1
LYSMD1
ST3GAL2
TTC13
ARV1
ZNF189
MRPL50
CHMP4B
MED15
STAU1
ZNF749
LARS1
SCRIB
ZFYVE28
CFAP99
UBAC1
RPIA
MMACHC
KBTBD6
GSPT1
CTF1
SYMPK
FOXA3
CRTC2
NUDCD1
NTAN1
BTRC
TTC33
CTU1
AHCYL2
PPP1R12C
TSNAXIP1
RANBP10
SLC35B4
C19orf53
STK25
RPL8
GFUS
ZNF169
AP2S1
NOP14
GRK4
WDR87
SIPA1L3
TNFAIP1
IFT20
C1orf159
BOLA1
ABCF2-H2BE1
ABCF2
ATP5F1D
ING4
C16orf91
TMEM127
CIAO1
PEMT
LRRC29
TFEB
CDCA3
ZSCAN22
MAD2L1BP
GTPBP2
SNX17
EIF2B4
TRAPPC3
ZFYVE1
ATP5PO
BUB1B
ZNF235
ZNF420
ZNF56
MICOS13
HSD11B1L
PHF12
TMEM59
TCEANC2
NPRL2
CYB561D2
KBTBD7
RALBP1
DYNC1I2
UBQLN4
LAMTOR2
SMUG1
WNK1
TSC2
NTHL1
UNK
SMARCAL1
BANP
SNX27
GATB
FBXO46
TIMM21
FBXO15
TSSC4
CNIH4
TMEM11
MRPL24
SLC4A2
CDK5
OSCAR
NDUFA3
NFXL1
ZNF337
TRAK2
STRADB
AP2M1
THRAP3
ZFYVE19
DNAJC17
DESI2
SCAF1
NDUFS2
TBL3
LETM1
ZNF224
PHF13
ZNF444
ZNF384
VCPIP1
C8orf44-SGK3
WRNIP1
CCDC146
SIRT2
NFKBIB
SLMAP
PEX26
ZC3H11A
UFSP2
ING3
RIC8B
HTRA2
POLR2E
UBR2
LMNB2
FEM1A
BUB3
CCDC150
NUDT13
ZNF350
ZNF2
GPANK1
CSNK2B
CNOT1
PSMD11
CLP1
RAB1A
ELOC
DSTYK
ZNF554
SOX6
C11orf58
ZNF230
B3GALNT2
SEPTIN9
SERPINI1
PDCD10
STK17A
IPPK
TMEM101
PRCC
ZNF37A
TFPT
PRPF31
TMEM102
CTDP1
CCDC90B
JOSD2
RPS7
RPGRIP1L
FTO
NDUFB5
MRPL47
DCAKD
NMT1
GPKOW
CAPN15
VIPAS39
AHSA1
TBX6
ZNF862
PANK3
ARHGAP9
MARS1
FBXO48
APLF
CCDC174
HMBOX1
INTS9
WAPL
WDPCP
MDH1
SLC25A19
USP48
FAM185A
FBXW11
GTF2H4
CDK5RAP2
INTS1
RABAC1
MXI1
THYN1
ACAD8
VPS50
HEPACAM2
DFFA
TRAF7
PTDSS2
TTC1
ZW10
NFKBIL1
ATP6V1G2
RAB5C
SSR2
CNOT4
MED27
PRRG2
NOSIP
AKIRIN2
ZBTB7A
RANGAP1
SEC61A1
RPS6KB2
ZNF419
CLDND1
SSR3
CWC22
ZGPAT
ARFRP1
VAPA
RPS27
PIGU
ZNF547
TRAPPC2B
TMEM69
GPBP1L1
TMEM43
CHCHD4
TIMM13
AURKAIP1
RPS20
SCAMP4
ADAT3
KMT2B
UTP11
PGBD4
EMC7
CHCHD3
ZNF226
IGSF8
PA2G4
ACTR1A
SUFU
ZNF484
ZNF25
ZNF32
DDX49
COPE
RPL18A
TMEM245
TOR1AIP1
PCM1
TMEM160
RALGAPA2
EXOSC4
RBM6
PSMD2
KAT7
BICD2
PHF23
MRPL20
PHB2
THOC6
HCFC1R1
LEMD2
METTL3
WBP2
PSMC4
SYPL1
ZNF527
NUP153
EIF1B
DPM3
PSMD4
SPHK2
RPL18
ZNF354A
AHCTF1
USP35
KCTD21
VPS4B
MAX
PRR14
PNPLA6
RAB30
SDCCAG8
CEP170
CXXC1
COPS7B
PDE6D
SSBP1
ENOX2
CIAO3
BIRC5
SCAMP3
UBL7
FDPS
NCDN
KIAA0319L
TMEM186
PMM2
SLX1B
SLX1A
BOLA2B
BOLA2
BOLA2-SMG1P6
UBE2Q1
GID4
ATPAF2
UCHL5
RO60
COMMD9
TMEM143
SYNGR4
RPS3
METTL26
EIF3C
EIF3CL
SNRPE
FAM193A
ZCCHC8
HIRIP3
GPR108
FBXL19
EIF5B
TXNDC9
PSMB4
SEC11C
CFAP410
CARS1
NOLC1
ZNF133
DDX47
USP31
NCLN
DGAT1
CFL1
TOR2A
ZNF586
PTBP1
RAB29
CRK
ZNF764
SLC38A9
BOD1L1
GINS3
RPS13
WDR53
FBXO45
ZNF584
PSMD3
NKIRAS1
RPL15
DCAF1
ADSS2
RPP40
GUSB
ZCCHC4
BET1
CIAO2A
MAF1
L3MBTL2
NUF2
ZNF599
RPL23A
LTA4H
OPA1
LIN37
RAD51AP2
RPS3A
RPL34
SMN2
SMN1
ABCC5
LUC7L
CAPN10
EIF2S2
ZNF343
TERF2
RETSAT
ELMOD3
ZNF500
ZNF567
C1orf109
MGRN1
GEMIN6
WASHC3
ABRAXAS2
MITF
NCBP2AS2
NCBP2
ZNF628
SH2D6
INO80B
DNM1L
XPOT
RPS26
STRN
TRABD
B4GALT7
EXOC4
HSP90B1
TRMT1L
SWT1
ZNF451
TMEM199
POLDIP2
TPGS1
RAB7A
RAB3C
COG2
ZNF747
APH1A
FAM222A
ZNF776
SNAPIN
PSMB6
BRD3
TSACC
CCT3
ASXL1
ZNF805
PPP6C
ZNF17
OAZ3
CLPP
ZNF277
DOCK4
DPP9
UBA1
HSPA13
SERP1
EIF2A
CSRNP2
TRUB1
RACGAP1
ZMAT5
UQCR10
FBXL18
CWC25
DCP1A
CAND1
KBTBD8
SHLD1
PPP1R13L
POLR1G
MED11
SKIV2L
NELFE
C7orf25
BDP1
BLOC1S5
ZNF585A
GFM1
ZNF684
THAP1
RAB8B
NUTF2
CENPT
PPP1R7
PASK
CCAR2
ZNF773
UBE2N
GPT2
IPO8
ZNF140
CHCHD6
KHDC4
KATNB1
POLRMT
ZNF180
DPH2
PES1
COPS7A
WASF1
CDC40
SF3B2
QTRT2
CCDC191
BRIX1
RAD52
TMEM33
BABAM1
INTS4
MED23
PARK7
ZNF436
NOP53
CNOT6
ACLY
CDK8
MVB12A
ZNF134
GPR137
MORF4L1
TMED9
HEXIM2
ZNF416
ELP6
NUP205
CANT1
RNASEH2C
PEX12
MACC1
CCNL1
NME1
ZNF227
LSG1
NAA38
CYB5D1
UCK1
CMPK1
WIZ
SCYL3
SUPT4H1
UBA52
RTEL1
POLR2J3
GAPVD1
TOR1A
CLINT1
IFRD1
DDX25
PUS3
SKP2
LMBRD2
FAM228B
SF3B6
DARS2
CENPL
ITPR1
KCTD5
SUGP1
MAU2
PRKCSH
CCDC151
MYBL1
MRPS16
ALKBH8
TM9SF4
AQR
SLC33A1
COPS8
MRPS25
CNPY2
DMAC1
OSBPL11
ZNF513
WDR46
PFDN6
ILF3
SASS6
MEA1
RPL37
ZNF548
SF3A3
TUT1
ZDHHC16
EXOSC1
MAP3K13
CDK9
DEDD
NARS1
TTLL11
RBL1
ZNF45
NDUFS7
EMSY
CAMLG
POMZP3
DYNC2LI1
TOMM22
C12orf43
TMEM222
EIF2D
FAM149B1
ECD
TPR
ODR4
DPM2
AKAP8
FIS1
USP15
TMEM94
RNASEH2A
SART1
CD2BP2
TMEM230
MRPS15
VEZT
FGD6
RBL2
C8orf33
ALG10
BIVM
POGLUT2
ZBTB45
ESCO2
AKT1S1
TBC1D17
ZSWIM9
LIG1
ZNF417
NUMA1
LRTOMT
CUEDC2
TOGARAM1
KLHL28
NDUFS3
KBTBD4
NDUFV1
FBXO9
TRMT2A
RANBP1
GGPS1
ARID4B
ZNF460
SNIP1
MTR
ZNF772
SLC37A3
DUS3L
ZNF324B
ARMH3
WDTC1
RPL29
MRPL54
APBA3
DNAJC28
RWDD1
ZC3H10
IPO7
GALM
CTNNBL1
TMEM214
THAP4
ATG4B
VRK1
ALG10B
UBE4A
SMIM30
WDR18
ZNF668
ZNF646
CDC34
ZNF317
DHX33
IPO13
ZSCAN32
ZNF174
TSNAX
R3HCC1L
ZNF26
FBXO38
ZNF721
PIGG
COA3
CNTD1
UBE2J2
ATP13A1
C15orf40
JTB
DTX2
CDC25C
FAM53C
ZNF155
DNAJC11
EIF3D
TMEM109
UBE2V1
TIMM23
CCDC124
FCSK
TSN
PAOX
PGAM1
SLC25A44
RPS19
PSMA2
MAMSTR
ARHGEF1
SMIM13
GSK3A
UBE2D1
LRPAP1
EDEM3
ZNF268
RPL12
LRSAM1
CCDC117
CLPTM1L
PURB
TMEM147
CCDC77
DHX30
SAP30
TXNL4B
DHX38
SERBP1
PHLPP1
XAB2
CEP350
ZNF211
CBR4
TMEM129
TACC3
ZNF221
ZNF550
SEL1L
SETDB1
XRRA1
SPCS2
HBP1
MRPL19
ACP6
ZNF446
FBXO31
MAP1LC3B
PUM3
TOR1AIP2
DNAJB6
NICN1
SHPK
CTNS
RPL22
SESN1
PCBP2
CEP57L1
LRRC47
NDUFB10
VPS45
ZNF286A
C8orf76
NFATC3
FOXJ3
SDF4
B3GALT6
CDK19
AMD1
NIP7
COG8
NELFB
DMAP1
ELOB
SNAP47
JMJD4
MRPL12
PNISR
AP2B1
ZNF304
LAMTOR3
EIF3F
N4BP2L2
DOHH
TRUB2
COQ4
AP5S1
WRAP73
SUPT5H
NR6A1
ZMAT2
YJU2
VKORC1
NUP214
ATP5MF-PTCD1
ATP5MF
MRPS22
GALK2
COPS2
CDCA8
ABLIM2
RCAN1
TMEM41A
MRPL11
DAZAP1
SND1
SUCLG1
LTN1
ZNF551
SH2B1
TUFM
NOP16
HIGD2A
TRAPPC10
SECISBP2
ATE1
MRPL21
IGHMBP2
LRWD1
ALKBH4
ANGEL2
POLR2H
YIPF2
TIMM29
ZNF614
ACBD5
CEP128
RNMT
FAM210A
NR1H2
ZNF565
ZNF146
ZNF165
NMNAT1
LZIC
LONP1
CATSPERD
PRPF4
CDC26
ZNF79
ZSCAN5A
SNRPB2
PPIP5K2
YY1AP1
DAP3
PRKCI
REXO1
RDH14
HSCB
CHEK2
PRPSAP1
PRPF6
SSNA1
ANAPC2
MYL6B
ZNF589
EXD2
ZNFX1
SENP5
NUP107
LRPPRC
TSNARE1
PPP1R11
STX10
IER2
RNF20
PAK2
FAM156A
FAM156B
KPTN
MRPL44
GPS2
C16orf86
OVCA2
GMPPA
TMEM150A
CEP97
REXO2
OTUD4
TIMM23B
PARG
TTC14
TRPC4AP
DHX8
WRAP53
TP53
WASHC4
SLC35E2A
SPECC1
NAPB
ITSN1
CRYZL1
DNAJA3
ARPP19
MEN1
RAB1B
FARSA
CIZ1
DNM1
RPS21
YWHAG
ZRANB3
R3HDM1
ZNF571
ZNF540
KLHL24
TIMM22
POLR3F
DZANK1
SNAPC3
KNSTRN
DAXX
CDC6
DOT1L
PSMD10
ATG4A
TVP23B
SSU72
NCOA3
SFXN5
MPI
NEDD8-MDP1
NEDD8
GMPR2
UBXN6
SLC35E1
PARL
ATG4C
JRK
PPIL2
ZNF774
MTMR9
TOE1
MUTYH
ZNF691
PIK3CA
C6orf89
POLR1B
MBD1
MYORG
ZNF302
CSNK2A1
MARCHF5
CPEB3
DENND1A
SMG5
U2AF1L5
U2AF1
TPRKB
CHCHD5
C18orf25
GALE
IZUMO1
SPDYE14
SPDYE10P
CASTOR2
ADO
RPL27
SETMAR
USP30
HDGF
RPS28
NDUFA7
FAM168A
RBM22
BCORL1
RPLP2
RPP30
LCORL
FAM32A
RC3H2
FAM207A
DNAJC14
SLC30A6
KIF15
KIAA1143
PSMC5
FTSJ3
RBBP5
TIMMDC1
TAF8
ZNF570
ZNF569
DYNC2I2
PRAF2
SUCO
KIAA0930
DDA1
RAB22A
TIPRL
SEC13
PTRHD1