ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX10144542 | Kasumi-1
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◢ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◢ SRX535453: A-375

◢ SRX535454: A-375

◢ SRX5501657: A-375

◢ SRX5501659: A-375

◢ SRX5501661: A-375

◢ SRX10131662: Bronchial tracheal epithelial cells

◢ SRX10131663: Bronchial tracheal epithelial cells

◢ SRX20436771: DLD-1

◢ SRX20436779: DLD-1

◢ SRX22001291: DLD-1

◢ SRX22001292: DLD-1

◢ SRX22001293: DLD-1

◢ SRX10715331: HCB1

◢ SRX10715344: HCB1

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◢ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX20230567: Ishikawa

◢ SRX20230568: Ishikawa

◢ SRX20230569: Ishikawa

◢ SRX20230570: Ishikawa

◢ SRX20230571: Ishikawa

◢ SRX20230572: Ishikawa

◢ SRX20230573: Ishikawa

◢ SRX20230574: Ishikawa

◣ SRX10144542: Kasumi-1

◢ SRX10144543: Kasumi-1

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX7366779: MCF-7

◢ SRX7366780: MCF-7

◢ SRX7366781: MCF-7

◢ SRX7366782: MCF-7

◢ SRX7366783: MCF-7

◢ SRX7366784: MCF-7

◢ SRX244177: MM.1S

◢ SRX244180: MM.1S

◢ SRX327758: MM.1S

◢ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◢ SRX1637467: MOLT-4

◢ SRX1637469: MOLT-4

◢ SRX1637470: MOLT-4

◢ SRX24723215: MRC-5

◢ SRX24723217: MRC-5

◢ SRX24723219: MRC-5

◢ SRX24723221: MRC-5

◢ SRX2375362: MV-4-11

◢ SRX2375366: MV-4-11

◢ SRX14127531: OCI-AML3

◢ SRX14127532: OCI-AML3

◢ SRX14127543: OCI-AML3

◢ SRX14127544: OCI-AML3

◢ SRX18455086: OCI-AML3

◢ SRX18455087: OCI-AML3

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◢ SRX4023329: T-47D

◢ SRX4023330: T-47D

◢ SRX728779: THP-1

◢ SRX728780: THP-1

◢ SRX9730732: THP-1

◢ SRX9730733: THP-1

◢ SRX9730734: THP-1

◢ SRX9730735: THP-1

◢ CDK9: STRING

OSGIN1
MAMDC2
WDR74
STX5
ELOA2
GSDMD
DENND3
NCF1
INKA1
CDHR4
UBA7
DHX16
PPP1R18
NRM
DUX4
PRAM1
CLIP3
SH2D3A
VAV1
PLEC
LYL1
NFE2
RNF166
CTU2
EAPP
LGR6
IAH1
DRC7
FABP6
TNFRSF1A
LHX6
UBE4A
CYB561
TNK2
HACL1
BTD
HNRNPF
TBKBP1
CSF1R
RGS19
OPRL1
LKAAEAR1
LAMB3
YIF1B
KCNK6
VASP
ZNF696
SLC9A3R1
RAB37
UHRF1
CPXM1
ZNF718
ZNF595
DCAF10
MPPE1
OLFML2A
TMC8
TMC6
DYRK1A
MEF2C
EVPL
RHPN1
STX10
IER2
AGTRAP
MTRNR2L1
TMEM275
SLC22A16
INTS12
GSTCD
SMG8
DUSP7
GNAI2
FRA10AC1
ARHGAP25
CASS4
NFE2L2
UCN3
ADAMTS15
RXRA
RPS6KA1
SEC14L1
LPIN1
STK32B
PADI4
DGCR6L
FMNL1
NBEAL2
CCDC12
SLC38A10
KLF2
C3orf86
TYROBP
NFKBID
HCST
CD300A
SARAF
LEPROTL1
CLEC5A
TIMP2
TMEM104
NAT9
HHEX
HBEGF
CRYAA2
CRYAA
IREB2
DUS1L
DPY19L4
CEP295NL
BCL3
ARSG
SLC16A6
TMEM45B
GALNT7
F11R
NINJ2
PDE6B
GPAA1
EXOSC4
GRIFIN
KCNK9
EPHA8
TPM4
NKX6-3
EMILIN1
OST4
KHK
CD33
TPM3
HM13
MYO18A
FAM180B
KRT17
C1QTNF4
SPINK8
RASAL3
MTRNR2L2
MSH3
DHFR
SH2D3C
CDK9
NTMT1
GSX2
SFTPD
CACNG4
EGFL7
NDST2
TMCC2
HPN
ANXA6
CCDC149
FAM107B
EXT1
TMED9
B4GALT7
DMAP1
ENG
MMP9
S100A8
NAA10
ARHGAP4
NFATC3
RAPGEF1
ZNF562
LOC102724770
DGCR6
MUC3A
SCAMP2
ZNF792
SIPA1
SDE2
ABT1
MAP1S
IL17RE
GATA2
LAPTM5
LHX1
DSTYK
SUSD1
FKBP1A
ZER1
MTSS1
SLC18A3
CHAT
GRAMD4
CSF3R
PHC2
ERLIN2
NIBAN3
FERMT1
C1orf159
FLI1
PRL
HIP1
LTB
LST1
NCR3
PLAUR
SLC12A7
NME1
STXBP5
SHANK3
RASSF2
ZNF620
KRT80
NCF2
MUC6
DUSP22
AKR1A1
STK10
KCTD12
TNFAIP8L2-SCNM1
TNFAIP8L2
SCNM1
LYSMD1
POLD1
NR1H2
UBE2J1
PPIAL4F
PPIAL4E
PPIAL4D
SIGLEC8
TACO1
PLXNA4
MAPK6
DNAJC10
CSRP1
SEPTIN9
PHYKPL
NDUFS7
USP3
SH2B3
TCTEX1D1
PSD
FBXL15
INAFM1
TFAP2E
SIRPB2
ID1
PCNX3
MAP3K11
GATD3B
GATD3A
ANKRD13D
TOX2
PRODH2
USH1G
OTOP2
AUNIP
PPP1R9B
GFM2
CCL3L3
CCL3L1
ZNF207
C17orf75
PMF1-BGLAP
PMF1
ADA
GCNT1
VPS18
OLIG1
CTRC
HNF4A
WDFY3
CAMK2G
SRC
TCTEX1D4
BTBD19
FGGY
PLK3
CRACR2A
TNFSF14
LIMS1
RAB24
PRELID1
MXD3
SHISA7
ZNF384
TACC1
SEMA4B
FCMR
NTNG2
PPP1R27
MCRIP1
PLEK
CIITA
BPIFA1
FGF7
TBC1D19
PPIAL4H
PPIAL4G
F2RL3
SERPINB9
TOR1AIP2
TOR1AIP1
CTSD
ACOT11
IFITM10
ALDH8A1
ZMIZ1
CXCL8
FAM207A
SAMD4B
GMFG
ITGB2
CXCL1
SPN
C3
ITGA9
OR4D1
PSMC5
FTSJ3
TEAD3
IQUB
BMS1
STING1
SMIM33
MLNR
NFKB2
CELF2
SAMD14
SCN1B
TOP3B
CEP112
UNC5A
RHOF
STARD8
IKBKE
GRPEL2
RBM47
ELMO1
UNCX
NDUFS3
KBTBD4
POMP
CYRIB
TSPAN16
CDYL
SBK3
TFF3
SBK2
USP15
RNF220
STXBP4
COX11
TMEM72
SF3A3
FHL3
CNPY1
STX16
MAN2C1
EIF1AD
CST6
BANF1
NAPRT
MROH6
RPS19
CD82
TMEM154
CYTH4
KCNIP2
SCML4
S100Z
STAB1
NMNAT1
LZIC
IL16
CALML4
RHBDF2
LAMB4
PTPN6
C12orf57
NFXL1
CNPY3
CCDC170
TBXA2R
NFILZ
MYO1G
GALNT9
CCAR2
C8orf58
TUBB3
MC1R
ARHGAP30
IGFBP4
MPO
AATK
TMEM242
SLC39A4
CPSF1
GRB2
UNC13D
DLK1
SIRT4
VAMP1
INPP5B
TAPBPL
SAR1B
COG1
ADAP1
TRIM41
LMO2
SAMD11
CHST13
FOXI1
GMCL2
LUZP1
STAT1
GTF2H2
JRK
ASPSCR1
ARAP1
SLC43A3
PSCA
CD300C
DDX1
SENP6
ARL5C
ACY3
LMBR1
RASA4B
GALK2
COPS2
CHSY1
IL6R
NUP210
PGLYRP4
FASLG
NAIP
ZNF467
S100A9
RPS14
CXCR5
RCSD1
EPS15
TMIE
ALS2CL
GAS2L1
APOBEC1
LILRA2
HDGF
MRPL24
GABPB1
TPD52L2
MRPL30
MITD1
ADAM10
MLXIP
EPHA1
STAT6
LIMD2
CEACAM4
ANKRD17
ACBD5
SNUPN
GNAI3
TPD52
GLRX
DENND10
JAG2
RASGRP2
NUDT14
MTPN
LUZP6
MYEOV
LAT2
SH2D4B
KCNN4
SYCE2
SPOP
C20orf203
PSMF1
PPP1CA
IDI1
LOC112694756
MAVS
TBC1D10C
CBFA2T3
DUSP3
CFAP97D1
TLCD3B
LOXL2
SIAH3
PDXK
PHF20
ZNF852
SLCO2B1
FFAR1
FFAR3
CRYBB2
PNRC1
CCZ1B
DGKZ
LINGO1
CBX2
CDK3
APLNR
USP30
RFX2
SYNJ2
ZFP64
PPFIBP2
SYTL1
PADI1
NLRP3
SIGLECL1
LRP3
CCL4L2
TMIGD2
FSD1
TM4SF18
TTC4
DENND4B
SLC22A13
KIAA0895L
EXOC3L1
E2F4
LSM4
ELMO3
SQSTM1
CHRM3
XRN2
ZNF408
ARHGAP1
APPL2
TNFSF9
DHRS12
MCTP1
GRAMD1C
TLR1
CCL19
DUSP6
HIGD2B
BBS4
COX16
TTLL8
TAF12
UBAP1
ARPC3
UNC119B
ACADS
CALR
RAD23A
FARSA
NDUFB8
HIF1AN
B4GALT3
LTB4R2
ITGA5
LTB4R
CIDEB
RAD54L2
NFRKB
ARHGEF2
CD1C
ST3GAL1
RGL4
SULT1B1
PLXND1
TM6SF1
THUMPD3
GNA15
RSU1
PIK3CG
IGF2
ALS2
NCF4
XCL2
SLCO2A1
RUNX2
FCAMR
LILRA3
ADRA2A
ARHGEF12
ZNF575
ETHE1
KBTBD2
CEBPD
SYNE3
P2RY8
PEX3
ADAT2
RPS5
FAM166A
STPG3
SNAP47
JMJD4
KIF5C
MYL12A
SDF4
B3GALT6
NELFB
TMEM184A
IQSEC1
LAIR1
TNFRSF4
SEPTIN8
PPARGC1A
RNASET2
EFNB1
ATP2A3
TP53I11
IRAK3
ATP12A
CXorf49B
CXorf49
P2RX1
ADRA1A
SLC16A2
SUPT20HL1
KCNU1
SDHAF2
CPSF7
TRIB1
TSPOAP1
NLRP2
MTIF2
SNX16
TMA16
RHOG
SLA
DLX4
GNG7
SLC39A3
CRISPLD2
CACNA2D4
LIMS4
GIMAP1-GIMAP5
GIMAP1
GHRL
FAM227B
DTWD1
TLK1
PPP1R16B
PSTPIP1
BIN1
HRCT1
SPAAR
SNRPD3
GUCD1
SDCCAG8
CEP170
TM9SF1
IPO4
YWHAB
ARL17B
NEDD9
GPR68
AK1
PARVB
CAMK2N1
TTR
GTF3C3
C2orf66
RPS9
RARA
ATG16L2
CEBPE
PDE6H
LRRC59
AAR2
PRRC2A
AIF1
PLEKHN1
KLHL17
TM7SF3
MED21
TTC32
USP24
RGCC
ST8SIA4
ARC
CLCA2
TSSC4
TMOD4
ASAP1
SNX10
SKI
IPCEF1
TMEM41A
CDK5RAP1
TSPAN31
AGAP2
ACTB
DCAF12
FKBP5
NOXA1
RNF149
HNRNPA1L2
METRNL
CABLES1
ADGRE1
POU3F2
LPCAT2
GGT5
MTA2
TUT1
TRAF3IP3
ANXA11
OR4K2
NABP1
DNAJC25-GNG10
DNAJC25
TMEM123
ATP6V0E2
NEK6
ATP11A
TMIGD3
ADORA3
CXCL2
CCN4
ALKBH3
TEKT2
ADPRS
SUPT4H1
MTMR9
CHCHD5
RORC
CAPZB
HPCAL1
NOS3
INPP5D
CALHM3
H2AB3
H2AB2
H2AB1
F8A3
F8A2
F8A1
SERPINA1
ANKRD33
SLC13A5
MRPL58
IPPK
MRPL1
GNPDA1
TMEM262
KDR
ATP8B4
GAPT
AURKAIP1
SLX1B
SLX1A
BOLA2B
BOLA2
STMN3
RTEL1
CORO1A
UBXN8
PSMC2
DNAJC2
ZNF622
C1QTNF1
ONECUT3
PRR5L
TTI2
ZYX
FAM131B
ATP6V0A1
YES1
ADAM8
HOPX
CD300E
NEFL
CASC3
KIF2C
URM1
RASSF5
STAP1
GPR88
DOK4
CAMP
POLR2E
GPX4
HACE1
GSTO1
ITPRIP
BID
TBC1D16
RAC2
NGFR
LYG2
MAF1
CYC1
WDR97
GTF2H2C_2
GTF2H2C
PRR5
SSBP4
EMC3
CLEC4O
CLTC
H4C12
H4C11
H2BC15
H2AC15
TMEM69
GPBP1L1
SLC39A13
CENPC
KIAA0930
PIGV
SLC66A1
AKR7A2
ADAMTSL4
WNT7B
MS4A3
CBWD5
CBWD3
STXBP2
PCP2
CMTM7
SH3BP2
ZFP37
SUN2
TGIF2-RAB5IF
TGIF2
ITGA3
BPI
CALML5
DCP1A
H4C14
H3C15
H3C14
H2AC19
H2AC18
H4C15
ZP3
ROPN1L
PRKAA1
FERMT3
ZNF391
PHF2
PTTG1IP
CRYBG1
LPCAT1
NOL4L
OSM
SEMA6B
NR1I2
GALNT3
OR10AD1
NLRP12
VSX1
ACSS1
GRK2
LYRM1
ZC3HAV1
PIM3
NT5C2
ZDHHC18
MAP1LC3B2
TNFAIP2
IFITM1
EFHD2
IFITM2
SEC14L5
TXLNB
IFITM5
POTEH
PLAC1
UBE2V1
SCNN1A
LTBR
TTI1
RPRD1B
MLEC
LRRC37B
PDE4D
PLCB2
WDR36
GPR61
PI4K2B
RPL19
CACNB1
NADSYN1
DHCR7
EVL
SH3PXD2A
TRPM6
CD2
ZNF805
AURKC
NOP16
HIGD2A
USP32
ARHGEF3
MAP3K8
FCGR1A
TBX10
SPTBN1
TRIP4
PCLAF
ZFYVE28
CFAP99
MRTFA
CBWD1
TPRKB
SLC12A6
NOL12
NUTM1
NOP10
ZNF784
PIM1
GSN
LDB1
ARHGDIB
ADA2
LOC100509620
PMVK
STIM1
CSNK1G2
PPIAL4C
PPIAL4A
KLHL6
PVALEF
CRB2
SSBP1
BRF2
MRPL40
HIRA
ADRM1
SUPT7L
SLC4A1AP
ANXA2R
VPS26A
CARD8
NR3C1
CFLAR
CHST12
ARMC7
NFAM1
NUP210L
SMPDL3B
WDR11
INKA2
PEAK3
PAG1
SHANK1
CYTH3
CLEC11A
RAB3IL1
MS4A15
CBWD6
ALG10B
SNRPB
INTS4
SGTA
THOP1
BTBD1
CARMIL1
PTPRG
AVIL
STX18
TEPSIN
NDUFAF8
CEP131
ZNF787
MYBPC3
BHLHE40
BSG
FGFBP3
PLEKHO1
UNC5B
RASGEF1A
EGR3
BEST1
C5AR1
YIPF7
RGS14
LMAN2
ZMPSTE24
NRROS
SMG7
SYTL3
TANK
LYSMD2
SERPINB6
RASA4
TMOD2
MDM4
PRRC2B
TTYH2
TNIP1
LARP1
MAPKAPK3
ETV6
CISH
ORAI1
CYP2E1
ABTB1
APBB1IP
UBE2L6
CABP1
SIGLEC9
ARL14EPL
NUF2
SCRIB
TRAF7