ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX244180 | MM.1S
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◢ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◢ SRX535453: A-375

◢ SRX535454: A-375

◢ SRX5501657: A-375

◢ SRX5501659: A-375

◢ SRX5501661: A-375

◢ SRX10131662: Bronchial tracheal epithelial cells

◢ SRX10131663: Bronchial tracheal epithelial cells

◢ SRX20436771: DLD-1

◢ SRX20436779: DLD-1

◢ SRX10715331: HCB1

◢ SRX10715344: HCB1

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◢ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX20230567: Ishikawa

◢ SRX20230568: Ishikawa

◢ SRX20230569: Ishikawa

◢ SRX20230570: Ishikawa

◢ SRX20230571: Ishikawa

◢ SRX20230572: Ishikawa

◢ SRX20230573: Ishikawa

◢ SRX20230574: Ishikawa

◢ SRX10144542: Kasumi-1

◢ SRX10144543: Kasumi-1

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX7366779: MCF-7

◢ SRX7366780: MCF-7

◢ SRX7366781: MCF-7

◢ SRX7366782: MCF-7

◢ SRX7366783: MCF-7

◢ SRX7366784: MCF-7

◢ SRX244177: MM.1S

◣ SRX244180: MM.1S

◢ SRX327758: MM.1S

◢ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◢ SRX1637467: MOLT-4

◢ SRX1637469: MOLT-4

◢ SRX1637470: MOLT-4

◢ SRX2375362: MV-4-11

◢ SRX2375366: MV-4-11

◢ SRX14127531: OCI-AML3

◢ SRX14127532: OCI-AML3

◢ SRX14127543: OCI-AML3

◢ SRX14127544: OCI-AML3

◢ SRX18455086: OCI-AML3

◢ SRX18455087: OCI-AML3

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◢ SRX4023329: T-47D

◢ SRX4023330: T-47D

◢ SRX728779: THP-1

◢ SRX728780: THP-1

◢ SRX9730732: THP-1

◢ SRX9730733: THP-1

◢ SRX9730734: THP-1

◢ SRX9730735: THP-1

◢ CDK9: STRING

SMPD3
FASTKD1
COX7C
PHB
NAA80
IFRD2
HYAL3
BTRC
NUDCD1
ZNF749
KBTBD6
DDX23
CALR3
C19orf44
ZNF225
TMTC3
CEP290
MRI1
C19orf53
CTU1
GSPT1
INVS
ERP44
NPRL2
TMEM115
CYB561D2
ST3GAL2
TCEA2
NTAN1
BOD1
PAFAH2
SV2A
BOLA1
CLPB
SCRIB
SLC35B4
CCDC146
STK25
NUDT13
MED15
ZNF189
MRPL50
GPBAR1
PNKD
AAMP
LARS1
PYCR3
GFUS
ATP5PO
PANK4
HES5
ZNF513
SNX17
EIF2B4
TTC33
ING4
C1orf159
TNFAIP1
IFT20
ZFYVE1
TSNAXIP1
RANBP10
UBAC1
GDE1
CCP110
TTC13
ARV1
RPIA
ZFYVE28
CFAP99
SYMPK
FOXA3
LRRC29
KBTBD7
TESK2
MMACHC
ZNF56
AHCYL2
UNKL
C16orf91
PERCC1
ODF3L2
MADCAM1
CBARP
MIDN
ATP5F1D
ARHGAP35
AP2S1
UBE2T
PPP1R12B
SMUG1
TTC1
PPRC1
CNIH4
ORMDL3
GSDMB
VARS2
GTF2H4
ZNF235
DEXI
CLEC16A
SIRT2
NFKBIB
PEMT
RALBP1
PPP1R12C
GPR15
CLDND1
GATB
WDR87
SIPA1L3
CTF1
BCL7C
ZNF517
ZNF34
RPL8
TSC2
NTHL1
SNX27
ZNF169
TRAPPC3
MAP7D1
UCKL1
BUB1B
ZNF420
ZSCAN22
TNFAIP8L2-SCNM1
TNFAIP8L2
SCNM1
LYSMD1
TMOD4
MAD2L1BP
GTPBP2
TMEM102
FGF11
CHRNB1
SPEM3
SPEM2
STAU1
LETM1
NOP14
GRK4
ZFYVE19
DNAJC17
BUB3
HMX2
TMEM127
CIAO1
PSMD11
ZNF350
ZNF337
UBR2
TFEB
CHPF2
ABCF2-H2BE1
ABCF2
GPKOW
TIMM21
FBXO15
ZNF354A
SLC39A1
CREB3L4
CRTC2
VCPIP1
C8orf44-SGK3
ZNF384
NFXL1
ARHGAP9
MARS1
RPGRIP1L
FTO
RASSF1
ZMYND10
TTBK1
TMEM11
SMARCAL1
THRAP3
ING3
TMEM59
TCEANC2
RTN2
ZNF444
NDUFS2
ADAMTS4
RAD51AP2
RAB5C
TBL3
RPS2
RNF151
NOXO1
CCDC174
SEPTIN9
DYNC1I2
UFSP2
C4orf47
CDCA3
JOSD2
ASPDH
POLR2E
GPX4
AKIRIN2
FAM185A
ZNF547
TRAPPC2B
SLMAP
PHF13
CLP1
YPEL4
THYN1
ACAD8
AP2M1
ZNF37A
SSBP1
DESI2
PRRG2
NOSIP
CWC22
EMILIN1
OST4
KHK
ZNF32
TSSC4
ENOX2
CHCHD3
KAT7
TRAK2
STRADB
OSCAR
NDUFA3
DDX49
COPE
STK17A
RBM6
MON1A
LMNB2
RAB1A
UBQLN4
RAB25
LAMTOR2
ZNF554
ZNF514
ZNF2
RAB29
RPL36
MICOS13
HSD11B1L
BANP
EXOC4
CHMP4B
DSTYK
SLC4A2
CDK5
ASIC3
FHL3
UTP11
CNOT1
NMT1
DCAKD
CCDC150
ZNF419
ZNF772
PEX14
DFFA
PSMC4
SLC25A19
SOX6
C11orf58
RIC8B
ZC3H11A
ZBED6
MED27
PEX26
FBXO46
MEIOSIN
MXI1
HTRA2
DQX1
MYLK4
WRNIP1
SCAF1
RRAS
UNK
H3-3B
PSMD2
WNK1
SERPINI1
PDCD10
FEM1A
PRR5L
COMMD9
ZNF224
HDGF
MRPL24
PHF12
VPS50
HEPACAM2
RALGAPA2
B3GALNT2
ZNF133
PANK3
PKLR
FDPS
AURKAIP1
ZNF343
RPL18A
FBXW11
TMEM101
ZW10
CLDN25
SEC61A1
ZNF527
SAMD1
C19orf67
MISP3
IPPK
TMEM70
ELOC
FBXO48
APLF
CAPN15
RPS20
SUFU
ACTR1A
KBTBD8
SSR3
USP48
NCDN
KIAA0319L
PSMD4
ZNF230
VPS4B
GPT2
VIPAS39
AHSA1
TFPT
PRPF31
RABAC1
KMT2B
C6orf47
APOM
GPANK1
CSNK2B
LY6G5B
PA2G4
PCM1
GINS3
RPS6KB2
PTPRCAP
RANGAP1
CNOT4
TMEM245
NDUFB5
MRPL47
WBP2
VAPA
USP31
UBE2Q1
CHRNB2
PIH1D1
ALDH16A1
TMEM43
CHCHD4
SLC17A7
ZNF484
ZNF585A
ZMYND15
MED11
CXCL16
WAPL
INTS1
ZNF773
PTDSS2
ANO9
PGBD4
EMC7
UBL7
WDPCP
MDH1
GID4
ATPAF2
UCHL5
RO60
LEMD2
PHB2
RPS13
TMEM160
RPS26
SCAMP4
ADAT3
DDX47
DCAF1
SCAMP3
FAM189B
PSMB4
CCDC90B
ZNF25
SSR2
ZNF586
IGSF8
RPS3
PRR14
FBRS
FAM193A
TOR1AIP2
TOR1AIP1
RETSAT
ELMOD3
PDE6D
COPS7B
L3MBTL2
NFKBIL1
DDX39B
ATP6V1G2
LTA4H
ZNF599
EIF1B
METTL3
PRCC
GFM1
SKIV2L
NELFE
C12orf43
ZNF451
CNOT6
CTDP1
RPS7
CDCA8
C1orf109
NUP205
BICD2
USP35
KCTD21
TMEM33
SYPL1
CDK5RAP2
SNX1
CIAO2A
ZNF416
ZIK1
GEMIN6
YPEL3
TBX6
ZNF776
THRA
PES1
PIGU
ZNF226
ZNF768
ZNF747
ILF3
THAP1
COPS7A
ZNF17
RACGAP1
ZNF227
TXNDC9
EIF5B
DNAJC28
TIMM13
CDK8
WDR53
FBXO45
ZCCHC8
RPL34
DBP
CA11
EML6
PUS3
DDX25
GPAA1
EXOSC4
GUSB
DEDD
DNM1L
HSPA13
RAB30
NOLC1
NARS1
WASF1
CDC40
ITPR1
CARS1
XPOT
BET1
DYRK1B
GABARAP
PHF23
DVL2
TOGARAM1
KLHL28
TMEM186
PMM2
KATNB1
PTBP1
SEC11C
MORF4L1
SDCCAG8
CEP170
ZNF805
AURKC
VMO1
PSMB6
GLTPD2
UBA1
MED23
CLDN6
TNFRSF12A
THOC6
HCFC1R1
EIF2S2
WASHC3
MCRIP2
METTL26
WFIKKN1
PNPLA6
INTS9
HMBOX1
ACLY
RAB3C
FAM222A
DCP1A
QTRT2
CCDC191
WBP1
INO80B
SKP2
LMBRD2
MAX
ZNF221
GSC2
TMEM69
GPBP1L1
NUP153
SLX1B
SLX1A
BOLA2B
BOLA2
SULT1A4
SULT1A3
BOLA2-SMG1P6
TRMT1L
SWT1
ZGPAT
ARFRP1
WDR45
PRAF2
VEZT
FGD6
RBL1
TMEM94
ABCC5
TERF2
TRAF7
RAB26
CRK
ADSS2
CATSPERE
RPP40
SNRPE
RXFP4
KHDC4
LRFN3
CFAP410
NUF2
ZNF862
SUGP1
MAU2
MRPL20
CCNL2
TXNL4B
DHX38
RAB13
RPS27
SF3A3
ZNF584
ZNF155
BOD1L1
SEL1L
HPS6
ARMH3
EMP3
CCDC114
TMEM143
SYNGR4
NEK8
RPL23A
TLCD1
RAB34
PROCA1
ZNF567
TMED9
B4GALT7
NOP53
NKIRAS1
RPL15
ZNF548
BDP1
MAF1
CYC1
WDR97
GPR108
TRIP10
SPHK2
RPL18
FAM83E
GALM
ZMAT5
UQCR10
FHIT
SCRT1
DGAT1
MITF
SERP1
EIF2A
SLC38A9
SLC50A1
DPM3
OPA1
ZNF277
DOCK4
ZNF45
RAB7A
AHCTF1
TRUB1
AQR
LUC7L
FAM234A
TSNAX
MGRN1
UBALD1
CCDC124
ZBTB7A
CAND1
SUCLG1
PPP6C
ZNF764
DPH2
B4GALT2
ATP6V0B
STRN
AP2B1
PEX12
LIN37
PROSER3
HSPB6
MEN1
MAP4K2
PSENEN
IGFLR1
UBA52
RBL2
DARS2
CENPL
ZCCHC4
SF3B2
GAL3ST3
MRGBP
IPO7
FBXL18
ALKBH8
TSACC
CCT3
CNPY2
SMN2
SMN1
CWC25
VRK1
CSRNP2
CAPG
SH2D6
DOHH
FZR1
CCDC117
ZDHHC16
EXOSC1
MBD1
CXXC1
EIF3D
CANT1
CORO1A
PPP1R7
PASK
SAP30
ZNF417
CLPP
IPO8
CHCHD6
TMEM199
SEBOX
POLDIP2
ABRAXAS2
EEF1AKMT2
TOR2A
FAM228B
TP53I3
SF3B6
NCBP2AS2
NCBP2
PRKCI
POLRMT
FGF22
RPL27
IFI35
PSMA2
SHPK
CTNS
DHX8
SLC25A44
MRPS16
DNAJC9
RAB8B
CUEDC2
OSBPL11
IFRD1
COPS8
ASXL1
BLOC1S5
TOR1A
INTS4
EMSY
ZNF691
HEXIM2
ZSWIM9
LIG1
BIRC5
PSMD10
ATG4A
LSG1
PUM3
SCYL3
STMN3
RTEL1
FBXO38
FBXL19
RRP36
MEA1
WDTC1
CAPN10
CIAO3
TCTEX1D4
BTBD19
NUMA1
LRTOMT
VKORC1
PRSS53
FAM53C
CDC25C
HBP1
SESN1
CEP57L1
ALG10B
ZNF540
ZNF571
ZNF550
SUPT4H1
ZNF304
TMEM79
SMG5
RPS3A
ZNF684
ZSCAN5A
SETMAR
PRR22
DUS3L
FBXO9
CILK1
ESCO2
CCDC25
CD2BP2
LAT
SPNS1
REXO2
SH2D3C
ZNF140
CDK9
TCOF1
CMPK1
SLC37A3
PPP1R13L
POLR1G
RAB19
THAP11
TMEM109
PRPF19
BABAM1
PNISR
GALK2
COPS2
SHLD1
CTNNBL1
PIP5KL1
DPM2
TOMM22
ARPP19
NAT14
ZNF628
RBM41
SNIP1
DNALI1
ZMAT2
HARS2
HARS1
DAZAP1
GAMT
ZNF500
SNAPIN
ZNF317
FBF1
C1orf54
APH1A
TSN
TLE3
CCAR2
C8orf58
FAM149B1
ECD
ITSN1
CRYZL1
EIF3C
EIF3CL
S1PR4
NCLN
MRPS25
ZNF436
WIZ
ZNF211
MRPL54
APBA3
RAX2
OAZ3
ZNF180
MACC1
USP39
C2orf68
TMEM150A
RNF181
PSMC3
DPP9
SASS6
ZSCAN32
ZNF174
CBR4
DMAC1
NAPB
ELP6
TOE1
MUTYH
CCDC77
HIRIP3
GGPS1
ARID4B
TMEM147
MVB12A
FAM168A
ZBTB6
RC3H2
ZNF268
RAB1B
USP15
TRABD
MUS81
CFL1
TPGS1
UBE2V1
UBE2N
PARK7
RCAN1
ZNF165
OR1F12
SPEGNB
GMPPA
TMEM222
TM9SF4
MRPS22
DYNC2LI1
TIMM22
RAD52
FCSK
SDF4
B3GALT6
HSPH1
STX10
IER2
CCDC142
TTC31
ZNF774
CAMLG
RGL2
PFDN6
WDR46
ETFDH
C4orf46
MRPL11
SPC25
ABLIM2
ADO
CACTIN
ATG4C
ACP6
TMEM88
NAA38
CYB5D1
CCND3
TAF8
ZNF286A
RPL29
SFXN5
SNAPC3
MTR
YWHAG
DNAJC14
UFD1
CDC45
FAM180B
NDUFS3
KBTBD4
RPS19
ANGEL2
OLFML2A
NR6A1
DNAJC11
AKAP8
TP73
WRAP73
TRMT2A
RANBP1
SUCO
PRKCSH
CCDC151
ZBTB45
SLC27A5
EIF3F
SMIM13
PSMD3
STXBP2
PCP2
XAB2
VPS41
SLC33A1
HSP90B1
MIA3
TTLL11
RBBP5
COG2
SUPT5H
RPS16
BIVM-ERCC5
POGLUT2
BIVM
PCNA
TMEM230
ZNF565
ZNF146
ATE1
EDEM3
N4BP2L2
UCK1
RPL12
LRSAM1
YY1AP1
DAP3
ZNF789
ATP5MF-PTCD1
ATP5MF
TMEM258
FEN1
SNRPB2
PRPF4
CDC26
AMT
R3HDM1
ZRANB3
NICN1
GRIN2D
LCORL
CENPB
CDC25B
SPEF1
IPO13
ZNF446
KIF15
KIAA1143
ZNF324
CEP350
GPR137
ZC3H10
RPL41
ESYT1
C7orf25
IZUMO1
FUT1
FGF21
RASIP1
RPS23
ATP6AP1L
KPTN
PRPSAP1
CDC34
FAM207A
RPL37