ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1637470 | MOLT-4
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◢ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◢ SRX535453: A-375

◢ SRX535454: A-375

◢ SRX5501657: A-375

◢ SRX5501659: A-375

◢ SRX5501661: A-375

◢ SRX10131662: Bronchial tracheal epithelial cells

◢ SRX10131663: Bronchial tracheal epithelial cells

◢ SRX20436771: DLD-1

◢ SRX20436779: DLD-1

◢ SRX10715331: HCB1

◢ SRX10715344: HCB1

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◢ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX20230567: Ishikawa

◢ SRX20230568: Ishikawa

◢ SRX20230569: Ishikawa

◢ SRX20230570: Ishikawa

◢ SRX20230571: Ishikawa

◢ SRX20230572: Ishikawa

◢ SRX20230573: Ishikawa

◢ SRX20230574: Ishikawa

◢ SRX10144542: Kasumi-1

◢ SRX10144543: Kasumi-1

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX7366779: MCF-7

◢ SRX7366780: MCF-7

◢ SRX7366781: MCF-7

◢ SRX7366782: MCF-7

◢ SRX7366783: MCF-7

◢ SRX7366784: MCF-7

◢ SRX244177: MM.1S

◢ SRX244180: MM.1S

◢ SRX327758: MM.1S

◢ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◢ SRX1637467: MOLT-4

◢ SRX1637469: MOLT-4

◣ SRX1637470: MOLT-4

◢ SRX2375362: MV-4-11

◢ SRX2375366: MV-4-11

◢ SRX14127531: OCI-AML3

◢ SRX14127532: OCI-AML3

◢ SRX14127543: OCI-AML3

◢ SRX14127544: OCI-AML3

◢ SRX18455086: OCI-AML3

◢ SRX18455087: OCI-AML3

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◢ SRX4023329: T-47D

◢ SRX4023330: T-47D

◢ SRX728779: THP-1

◢ SRX728780: THP-1

◢ SRX9730732: THP-1

◢ SRX9730733: THP-1

◢ SRX9730734: THP-1

◢ SRX9730735: THP-1

◢ CDK9: STRING

CDCA3
HHIP
PEBP4
WDR74
STX5
UCKL1
CDPF1
MAMDC2
LOC102724770
DGCR6
PRCC
BTRC
TSNAXIP1
RANBP10
TCEA2
CYTH1
ARHGAP35
AP2S1
NPRL2
TMEM115
CYB561D2
TESK2
MMACHC
DUX4
CCM2
PKIG
CHMP4B
NAA80
IFRD2
HYAL3
NUDCD1
ALDOC
FEM1A
UTP3
KBTBD7
PHF12
TMEM11
PLCL2
PHB
VARS2
GTF2H4
SMPD3
CLPB
HPSE
PPIAL4H
PPIAL4G
AHCYL2
ALDH1A2
PCDH10
GSPT1
CALR
RAD23A
FARSA
HDGF
MRPL24
TNFAIP8L2-SCNM1
TNFAIP8L2
SCNM1
LYSMD1
TMOD4
ST3GAL2
ARL4D
CALR3
C19orf44
ARHGAP39
BANP
SRPK2
ATG4D
RHEX
ATP2C1
NKAIN4
ZNF718
ZNF595
LAIR1
ADA
ZNF704
APBA2
WDPCP
MDH1
KANSL1
KBTBD6
NFE2
STAU2
CXCR4
RASSF1
ZMYND10
STATH
PI16
RBL1
IL33
CR2
C3orf86
INTS9
HMBOX1
TNIP3
VCPIP1
C8orf44-SGK3
NPIPA1
ACADM
C1orf159
NRROS
PEMT
STK17B
RTL3
SLC4A2
CDK5
ASIC3
ZFYVE1
SLC39A1
CREB3L4
CRTC2
RPL36
MICOS13
HSD11B1L
ZNF444
IQGAP2
DEGS1
BOD1
PPRC1
AGBL1
CCBE1
TRIB1
DGKA
PYM1
KMT2B
NUPR2
CHCHD2
SHQ1
CHD1
GRAP2
TAF12
ARHGAP25
CRYGN
ING3
INVS
ERP44
SCAF1
RRAS
ORAI2
NPIPB15
LZTFL1
H2AZ2
GFRA4
NOP53
GPBAR1
PNKD
AAMP
SEC31B
CST5
CD82
CD1B
EMILIN1
OST4
KHK
ARHGEF7
PANK4
HES5
BAIAP2
PPP1R16B
TMTC3
CEP290
PAFAH2
NEIL3
DCLK3
FRG2C
MAD2L1BP
GTPBP2
ZNF331
PARL
SLC2A8
FBXL12
RUBCNL
VPS50
HEPACAM2
GRAMD4
MND1
HEXA
CD69
DDX23
LTB
LST1
NCR3
GNA15
TOX2
RHOH
NFRKB
CD300A
EAPP
GSK3A
TLR9
GPD1L
FXYD2
PVRIG
VSX1
PPP1R12C
CD1A
UNK
H3-3B
DDX4
MDM4
CHPF2
ABCF2-H2BE1
ABCF2
RAB37
STX6
KRTAP17-1
KRTAP16-1
KRTAP29-1
CTSH
BNIP3L
BHLHE23
ZNF225
AP2M1
EPHX2
LGMN
UBR2
KCNC2
CTU1
REPIN1
SUFU
ACTR1A
TTC28
IL17A
NMT1
DCAKD
F13A1
WFS1
DSTYK
GATB
MSL2
KRT10
TMEM236
FBXO48
APLF
FGR
SYNJ2
VIPAS39
AHSA1
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
GSR
FBXL19
PSMA6
YBX3
PTPN6
C12orf57
EPHA2
LAMC2
LRP2BP
TPST2
SEC14L2
CXCR5
RUFY3
ITGA6
FAM222A
SCGB1C2
SCGB1C1
ODF3
PYCR3
GFUS
CAMK4
CCDC146
LEF1
ZNF335
SEPTIN9
RCSD1
WNK1
ZNF337
SLC35B4
ZNF784
PTPN3
ZNF821
PPIAL4F
PPIAL4E
PPIAL4D
DEFB136
TLR6
BIRC5
TSSC4
STAU1
TIMM21
FBXO15
ABHD12B
SNX9
C20orf141
TMEM239
KCTD9
CDCA2
THBS4
THEMIS
TNFAIP1
IFT20
PRKD2
LDLRAD4
EMP3
CCDC114
LAT
PARP16
RPGRIP1L
FTO
ACTA2
HSPA13
PTP4A2
SYT12
PSMF1
SLC2A6
FNTB
NAPA
OSER1
FMNL1
NEK8
TRAF4
EGFLAM
MAP1LC3B2
AHSP
NTAN1
ITGA4
KIF2C
TJP1
HGS
ARL16
OXLD1
CCDC137
RIC8B
SLC12A6
STK25
IL32
MKRN3
GZMA
PEX14
DFFA
LSM4
ADAMTS1
WT1
UBE2T
PPP1R12B
RCAN1
POLDIP3
PTAFR
CCL1
CCL13
PRPF40B
SSTR3
TGM6
IL23R
TMEM70
ELOC
HHEX
USP7
COL20A1
ATP6V0A1
PYGM
FOXP1
SOX17
NOL11
RNF144A
TNFRSF13B
LARS1
RGL4
TFEB
SLFN12
NBEAL2
CCDC12
DNM1L
STAP1
BICD2
NSMF
FAM193A
SPTAN1
H6PD
NUF2
PLXNA4
LMO2
TMEM101
TTI2
PROB1
SLC23A1
MZB1
RPS9
CAPN15
MRPL1
ARHGEF3
RHOQ
ATP6V1E2
MYO18B
SLC47A1
FASTKD1
FBXW11
TESPA1
MRPS26
GNRH2
CDT1
PTK2
TAS2R50
ZFYVE19
DNAJC17
FHAD1
GDE1
CCP110
JOSD2
ASPDH
CNOT6L
SCML4
CCNG2
EPAS1
NME1
TPGS1
ZSCAN25
THYN1
ACAD8
BORCS7
LAMC1
ATP11B
SYMPK
FOXA3
TFPT
PRPF31
PTCH2
PCNX4
ZBTB45
SLC27A5
RPS26
UBQLN4
RAB25
LAMTOR2
DHX33
MEIG1
AVP
TNFRSF4
TNFRSF18
CCAR2
C8orf58
ATF6
D2HGDH
SSBP1
FAM3B
HECTD1
TLE3
TOMM34
STK4
PHF13
N4BP2L2
PLK1
TMEM107
SHISA5
SLC4A8
GALNT6
RLN1
PNOC
SYTL2
PLCG1
SLA
ASB2
VAT1
RND2
OGN
NET1
MMP9
RIPK4
CRBN
TMC8
TMC6
ARHGAP24
PEX26
DYNLT1
ZAP70
ZNF500
DPP6
ATAD2
RPIA
RPL29
DESI2
PRR22
DUS3L
DHRS11
ARID3B
DOK2
XPO7
ZGPAT
ARFRP1
MED23
TENT5C
VOPP1
CCDC69
IFIT3
WIPF1
LIMS4
ZNF165
OR1F12
IKZF3
DRC7
RFX8
ZNF354A
MX2
SOX6
C11orf58
ZNF133
TTF1
CFAP77
RHCG
ALDH3B2
FAM185A
BCL9
FBXO46
MEIOSIN
OSBPL5
TMEM258
FEN1
FAM168A
S1PR4
NCLN
UBE3C
TFAP2E
DNTT
ZNF513
SNX17
EIF2B4
OR4D1
ICAM2
ZNF736
NUCB2
ANKLE2
CAMK1
EPHA1
PRRG2
NOSIP
B9D1
MAPK7
MFAP4
HRH2
OR10T2
TFAP2C
ZNF56
MCFD2
TTC7A
RANGAP1
COPS4
MAPKAPK3
DNAJB4
CDK8
FAM53B
TNFRSF1A
IL17RA
WDR87
SIPA1L3
FCRLB
GFI1
TES
FH
ATXN7
ARHGEF12
MED15
HDAC7
CDKN2C
MEN1
MAP4K2
TM9SF1
IPO4
RETNLB
COX7C
MAMSTR
ZNF354B
PRMT2
TOR4A
LCK
DYNC1I2
MBNL1
LYST
DBNDD1
ORMDL3
GSDMB
NSFL1C
RTTN
TMEM245
SMAD2
SLC33A1
CCDC90B
B4GALNT4
PTCRA
RNASEH2C
KAT5
SIRT4
ABRACL
PNLIPRP3
DPEP1
PPP1CA
TBC1D10C
CARNS1
GP5
GGA2
RALGAPA2
ERAP1
LRIG1
ABTB2
DLC1
CHCHD3
SMAD7
ZFYVE28
CFAP99
SMO
ADORA2A
SMG6
SERHL2
FIGNL2
BRF2
KCNN2
FCGR2A
CSTA
PLAC8L1
STX18
FAM228B
WBP2
TP53I3
SF3B6
TRAF3IP3
EDEM1
FILIP1L
NUDT13
RBM38
EIF3F
DEK
CDK5RAP1
APBB1
FRG2
ANGPT2
IFNB1
ZNF749
ZNF226
TRAPPC3
MAP7D1
RAB1A
DDAH2
CLIC1
MSH5
SUPT4H1
TAF3
ZNF408
ARHGAP1
ESYT2
H1-7
DCP1A
SARAF
MAP3K8
LEPROTL1
TTC13
ARV1
MTRNR2L1
EVL
ARHGAP27
SNX1
CIAO2A
TMEM59
TCEANC2
ERF
CEP85L
FNDC7
DEXI
CLEC16A
SELENOW
UBC
CDK5RAP3
AURKAIP1
DRAP1
C11orf68
TRIP4
PCLAF
BUB3
TMEM163
P2RY11
PPAN-P2RY11
PPAN
ANGPTL6
GALK2
COPS2
NDUFB3
FAM126B
TTC33
TMEM262
BUB1B
WDR24
STUB1
JMJD8
LIMS1
SVIP
HIPK1
TLE4
SMARCA4
ZSCAN22
ZFYVE21
XRCC3
UBE2J1
FMO1
TBC1D31
MRI1
C19orf53
SAMD1
C19orf67
MISP3
CISD3
BCAR3
STMN3
RTEL1
GNGT2
ABI3
POMT1
PANK3
ZC3HAV1
MTA3
USP48
ARHGEF1
ASNS
MRPS18C
HELQ
CD59
XCL2
AAR2
MYO1G
MTIF3
GSTA4
CHSY1
ZBTB46
TRAT1
BIK
PLLP
TSC1
GFI1B
CFAP20
TCF3
CALM2
DHX16
PPP1R18
NRM
RASAL3
AQP3
SNRPD3
GUCD1
C6orf47
APOM
GPANK1
CSNK2B
LY6G5B
RABAC1
IDNK
SELENOH
CCNI
ETV3
PIGU
ZNF563
ZW10
CLDN25
ACTN4
SNRPB
CASP8
ADD3
SLC35E1
ZMAT5
UQCR10
TNPO3
CXXC5
PIK3R1
IFNA1
TUBA4B
TUBA4A
STK16
GLB1L
ASXL1
RB1
SPON2
SF3A3
GPR160
ACTRT3
TMEM102
FGF11
CHRNB1
SPEM3
SPEM2
GTF3C2
VPS37B
ARL5C
CXorf49B
CXorf49
TRAF7
RAB26
AEBP1
USP30
RNF168
SWI5
GOLGA2
SMCO1
ZNF101
ATP13A1
HDAC9
RPL18A
GABARAP
TOR1AIP2
TOR1AIP1
PHF23
DVL2
TAF1C
ADAD2
MTA2
TUT1
TGFBR1
MAF1
CYC1
WDR97
CCND3
YIPF2
TIMM29
TAF8
KIAA0408
MTMR9
SMARCAL1
THAP11
RACGAP1
NUTF2
CENPT
ATP2A3
TCF7
TM7SF3
SUGP1
MAU2
GPKOW
PHF19
MCM7
AP4M1
PSMD11
RASSF5
KAT7
NOP14
GRK4
ZNF140
ZP1
CLDN5
PEX3
ADAT2
MXRA7
COL6A2
KRR1
FCGBP
SLA2
PTDSS2
ANO9
MYO18A
LAX1
HEMGN
MTF2
TMEM229B
ETFDH
C4orf46
BCL3
UNC93B1
COX16
GPR15
CLDND1
SH3BP5
TMEM127
CIAO1
KCTD5
SIRT2
NFKBIB
HIP1
PPIP5K2
RBM6
MON1A
SMARCA2
FAM184B
SCRIB
UBAC1
ADARB1
ARHGDIB
HEXIM2
FOXN1
THRAP3
ZNF354C
CCDC138
EZR
PEX5L
GCSAM
CAVIN1
ASPRV1
TTBK1
PEAK1
HMG20A
GTPBP3
ANO8
CHCHD1
ZSWIM8
GATA2
GCNT4
HEXIM1
MYLK4
CNIH3
ENTHD1
ATXN1L
SLC26A11
TACO1
SSH2
AFF3
REXO4
ADAMTS13
TMEM160
ZNF527
ZNF169
STAT4
UNKL
C16orf91
PERCC1
ZSWIM9
LIG1
ATG9B
ABCB8
ARHGEF2
GRHL3
ZNF223
SP140L
RPS7
CALCOCO2
ACSF3
C17orf113
FAM180B
NDUFS3
KBTBD4
CANT1
TFIP11
PLAGL1
LY6H
RBBP5
SYTL3
TMEM45B
ANTKMT
HAGHL
CCDC78
METRN
AQR
YJU2
MED18
NT5C2
DOCK10
TMIGD1
ZNF235
RAB27B
NOTCH3
LPAR6
MRPL44
RBM28
GFM2
PKLR
FDPS
VKORC1
PRSS53
ZNF224
CCDC150
NAA10
ARHGAP4
NPY4R2
NPY4R
HMX2
BTN3A2
WBP1L
PRDM1
CTHRC1
EPB41L1
CD3E
OR10P1
LRRC31
RPS20
ALG10
PIGZ
CD28
DIABLO
MTBP
MRPL13
CHST12
CALM3
PPP5D1
UBE3B
KCTD10
GTSE1
SLC32A1
ANXA1
KIF2A
KCNQ1
RPL23A
TLCD1
RAB34
PROCA1
TRAFD1
SRSF10
REEP5
SLFN12L
AOAH
SLC9A3R1
KIF20A
BRD8
TNFRSF10A
CBARP
MIDN
ATP5F1D