ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5501661 | A-375
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◢ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◢ SRX535453: A-375

◢ SRX535454: A-375

◢ SRX5501657: A-375

◢ SRX5501659: A-375

◣ SRX5501661: A-375

◢ SRX10131662: Bronchial tracheal epithelial cells

◢ SRX10131663: Bronchial tracheal epithelial cells

◢ SRX20436771: DLD-1

◢ SRX20436779: DLD-1

◢ SRX22001291: DLD-1

◢ SRX22001292: DLD-1

◢ SRX22001293: DLD-1

◢ SRX10715331: HCB1

◢ SRX10715344: HCB1

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◢ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX20230567: Ishikawa

◢ SRX20230568: Ishikawa

◢ SRX20230569: Ishikawa

◢ SRX20230570: Ishikawa

◢ SRX20230571: Ishikawa

◢ SRX20230572: Ishikawa

◢ SRX20230573: Ishikawa

◢ SRX20230574: Ishikawa

◢ SRX10144542: Kasumi-1

◢ SRX10144543: Kasumi-1

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX7366779: MCF-7

◢ SRX7366780: MCF-7

◢ SRX7366781: MCF-7

◢ SRX7366782: MCF-7

◢ SRX7366783: MCF-7

◢ SRX7366784: MCF-7

◢ SRX244177: MM.1S

◢ SRX244180: MM.1S

◢ SRX327758: MM.1S

◢ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◢ SRX1637467: MOLT-4

◢ SRX1637469: MOLT-4

◢ SRX1637470: MOLT-4

◢ SRX24723215: MRC-5

◢ SRX24723217: MRC-5

◢ SRX24723219: MRC-5

◢ SRX24723221: MRC-5

◢ SRX2375362: MV-4-11

◢ SRX2375366: MV-4-11

◢ SRX14127531: OCI-AML3

◢ SRX14127532: OCI-AML3

◢ SRX14127543: OCI-AML3

◢ SRX14127544: OCI-AML3

◢ SRX18455086: OCI-AML3

◢ SRX18455087: OCI-AML3

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◢ SRX4023329: T-47D

◢ SRX4023330: T-47D

◢ SRX728779: THP-1

◢ SRX728780: THP-1

◢ SRX9730732: THP-1

◢ SRX9730733: THP-1

◢ SRX9730734: THP-1

◢ SRX9730735: THP-1

◢ CDK9: STRING

WDR74
STX5
GSTA4
MAMDC2
EAPP
H4C14
H3C15
H3C14
H2AC19
H2AC18
H4C15
MTRNR2L2
MSH3
DHFR
PHC2
KIF5C
NUF2
COL23A1
MTRNR2L8
DUX4
MTRNR2L1
FRA10AC1
EIF2D
DSTYK
TAF12
DCP1A
S100A2
GBA
TRIP4
PCLAF
TMEM107
PTPRN2
RAD54L2
TBC1D19
H1-2
MUC3A
HMGB1
USPL1
CDK5RAP1
STX16
SCAND1
CWC25
DRG2
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
SF3A3
RBBP5
POLDIP3
RPS7
STX18
FAM180B
NDUFS3
KBTBD4
DHX8
H4C12
H4C11
H2BC14
H2AC14
ANKRD35
ARL4D
TRIM48
PLEKHM3
ATP5MC2
TBL3
RPS2
RNF151
NOXO1
NBPF1
SAR1B
RPL37
CARD6
TRIAP1
COX6A1
H4C6
H1-3
H3C6
RGPD1
RGPD2
SMARCD2
GEMIN7
ZNF296
S100A14
S100A16
RCAN1
PTPRH
SELENOH
CTNNB1
NME1
NTSR1
CCNL1
ZBTB45
SLC27A5
PARP16
SECISBP2L
SSBP1
CRB1
TMEM167B
UTP3
H2BC21
H2AC21
H2AC20
TTC26
MTF2
SLC24A1
MRPS23
GTF2H2
H4C7
H3C7
BNIP1
MAN2C1
INTS12
GSTCD
RPS6
WDR36
FAM3C
YWHAE
UCKL1
MLEC
SERPINE2
NDUFB10
RPL3L
NIBAN2
H3C13
H2BC18
ERCC1
DMAP1
LAG3
LY6K
DPP9
LRRC37A3
STN1
GTF2H2C_2
GTF2H2C
SNAP47
JMJD4
FXYD3
AURKAIP1
TATDN3
NSL1
MTA2
TUT1
PSMF1
SIRT4
PPP6R1
SRGAP2B
SRGAP2C
RAB5IF
SNX24
MANF
RBM15B
STAT3
ATF6
LAMP1
TBC1D13
MRPL30
MITD1
H3C3
H2BC3
SLC27A1
TARS2
TMEM222
ALG10B
RAB13
RPS27
MYO9B
HAUS8
FCGR3A
FOXJ3
ZNF207
C17orf75
DEFB132
GOLGA7B
CD22
POLG
YIPF2
TIMM29
METTL25
CCDC59
EFCAB2
RARS1
HPCAL1
MRPL16
WSB2
TNFAIP8L2-SCNM1
TNFAIP8L2
SCNM1
LYSMD1
TMOD4
H2BC5
H1-4
TBL1X
RPL12
LRSAM1
PTPN6
C12orf57
H2BC15
H2AC15
NOTCH2
PSMD3
SMG8
KMT2C
DDIT4
RPS20
FAM227B
DTWD1
GTF3C3
C2orf66
TEX46
KDM1A
KIF2C
MRPL21
IGHMBP2
NOC4L
DDX51
PRR5L
COMMD9
JRK
COX5A
KBTBD6
SLC35E2B
BHLHE40
TACO1
COMMD2
LARS2
PDCD6
SH2B3
POLD1
NR1H2
NDUFC2-KCTD14
NDUFC2
U2SURP
DUSP7
STX1A
CALHM1
MDM4
SLC44A1
EXTL1
RPS5
UBQLN4
RAB25
LAMTOR2
ZNFX1
SDHAF3
KRR1
TMEM262
ZER1
TAGLN2
MED18
RANBP2
AGK
GNAI2
TSSK6
NDUFA13
ITPKC
COQ8B
NKIRAS1
RPL15
FAM98B
WWP2
NOB1
MAPK1IP1L
AP5S1
NUP107
USP3
CDK2AP1
MTERF4
TCEA2
RUVBL1
NCBP3
SSBP2
TTC1
SOCS5
SAMD4B
GMFG
SPRY4
NMNAT1
LZIC
RPS28
NDUFA7
TDRD9
ATP5MPL
TAMM41
H3-2
MED23
TSPAN10
NPLOC4
PRKCE
BCAR1
SEC16B
SEC13
TSC2
NTHL1
DPY19L4
CDKN2AIPNL
MTIF2
KLHL12
NDUFA12
MRPL58
CCDC90B
TVP23B
PPRC1
GALK2
COPS2
USP4
WDR24
STUB1
JMJD8
EPHB4
HEATR1
PMS2
AIMP2
NREP
SLC25A51
MKRN2OS
MKRN2
ASB6
CDC73
MRPL1
MBTPS2
KANSL3
FER1L5
SOAT2
IGFBP6
NPAS4
PCID2
CUL4A
METTL9
MRPL19
POLR2J3
DDX1
INTS1
FRG1
PDP2
KDM8
PSMD11
PTEN
KLLN
UNC45B
NLE1
ANP32E
SRSF4
ACTN1
KNL1
RPS3
WNK4
VPS25
ELAVL3
NSFL1C
MOGS
MRPL53
PDE8A
SNAI1
INTS5
GANAB
GAPDH
TTPAL
ARL2BP
CCDC88A
DCAF10
VPS33A
IQCH
AAGAB
AAR2
UBOX5
FASTKD5
BUD13
PUS7
RINT1
KYAT1
ZBTB37
METTL15
KIF18A
CLCA2
SNRPB
H4C4
H3C4
H2BC6
DRD4
ZSCAN22
NCOA3
H2AC7
H4C5
H2BC7
TRMT61B
TMED2
MAT2A
RBM39
BCL3
NT5C
CLUAP1
C16orf90
PDE4DIP
ID1
GFM2
SLC25A32
DCAF13
NFE2L2
PRKCSH
CCDC151
LONP2
ABCC11
SLC25A13
EIF3E
ANGPTL4
ADPRHL1
ANXA1
PEMT
DPH7
UQCC1
DNAJC24
DCDC1
NID1
DNAJC11
TOR1AIP2
TOR1AIP1
UBL7
AP5Z1
POMP
STARD4
SLC20A1
BBS1
RPS6KA1
MICALL1
IL37
CDCA3
ZNF696
YWHAZ
CATSPERG
H3C8
H2BC10
SSNA1
ANAPC2
FBXO46
TTC4
PHAX
ALDH7A1
MEIOSIN
ZWILCH
SNAPC5
RPL4
YARS1
S100PBP
H4C9
H2BC11
H2AC11
VTA1
NMBR
H2BC12
H2AC12
AP3B1
CALM2
FBXW2
SYT5
H2BC8
H2AC8
DNMT3A
PARP2
CCNB1IP1
RMDN2
PHLDA1
ASB2
B3GNT7
ST3GAL2
NUP153
ELAVL2
WASHC2A
ADNP
TRIM65
MRPL38
SNRPB2
DDX59
ARID2
CCDC15
PARD6B
GSN
SULT6B1
SIRPD
SLC35E1
CHD1L
RPL27
IFI35
PRKAB2
H4C3
H1-6
LZTR1
ZNF3
COPS6
SCRN2
LRRC46
OSBPL7
WDR31
BSPRY
USP30
PANK4
HES5
PEX14
DFFA
CIAO3
H4C2
H3C2
H2AC4
OGT
SACM1L
H4C1
ALDOA
PPIP5K2
H3C1
H1-1
GOT2
DAB2IP
SPRY2
PA2G4
MYBL2
PPP6C
GARS1
AP1G1
HEXIM1
ZC3HC1
ZBTB40
RHBDL1
RHOT2
LRATD2
H4C8
VPS4A
PSPC1
ZNF721
PIGG
TPT1
LIMA1
COL16A1
ZMPSTE24
TMEM101
TSNAX
SNRPE
SAMD10
PRPF6
NUP188
DOLK
ELK4
H2BC17
H2AC17
H3C12
UBA2
PYGB
CCDC125
TCHP
HDGF
MRPL24
TEFM
KIF15
KIAA1143
NAGK
PSMD9
HPD
DRAP1
C11orf68
GORAB
GPRC5A
EPHA3
CCAR2
C8orf58
ECSIT
CNN1
MRPL40
HIRA
NECAP2
WWTR1
DISC1
EEF2K
AGMO
CALR
RAD23A
ZC3H10
RPL41
BANP
ESYT1
ZSCAN25
AP2B1
TRPC4AP
PEX12
CCDC174
ZNF770
TRIP6
SRRT
PPID
EFNA3
PLEKHB1
ANKRD63
ZCCHC4
PARK7
ARL14EP
G6PC3
LSM12
CDK12
MED1
CRTC1
SLC9A1
COG2
TSR3
GNPTG
EPRS1
WIZ
NRF1
SMG7
LHX9
C1orf53
ISLR
TOP3B
SH2B1
TUFM
PRRG2
NOSIP
MRPS31
ZNF594
GOSR1
POLR3E
TTI2
VPS72
PIP5K1A
ROM1
EML3
B3GAT3
MRPS24
DHRS3
ITGB3
TRIM62
ZNF789
ATP5MF-PTCD1
ATP5MF
COMMD1
UCHL5
RO60
USP48
STYXL1
MDH2
ANXA2R
POU2F1
AMOTL1
BST1
PDE6A
GID4
ATPAF2
SART1
WDR70
NUP155
ATR
NME6
RPL10
RRP9
PARP3
MRPS14
EIF3H
ITGA3
FBN3
SYMPK
FOXA3
TMEM127
CIAO1
MTMR2
CCDC200
SLC39A13
FAM193B
CSRNP1
CHMP4B
ZNF212
STAT1
POR
TOB1
CREBL2
TM9SF1
IPO4
ZNF106
SNAP23
STK10
TNFSF14
DDX23
PAFAH2
TMEM79
SMG5
RPTOR
FBXO38
NOC3L
LENG8
DMTF1
CSDE1
VPS37B
RNF10
COQ5
KEAP1
CSNK1G3
AXL
H3C10
H2BC13
H2AC13
TRIM16L
OTOA
NDUFS7
DDX46
LDAH
DR1
MUL1
ERLEC1
ASB3
PDE12
RASA3
MPG
RHBDF1
ZP4
PRDX1
GPS2
EIF5A
TRMO
EXOSC8
ALG5
KLHL20
RNF168
PRKAG2
TNFRSF10B
NPR1
ILF2
PRRT3
TUBB1
KRT31
PRCC
MRPS15
WBP1
INO80B
ZNF148
CASC3
NFKB2
R3HDM2
INHBC
RUSF1
TTC32
EHMT1
ISG20
ARRDC1
PRDM5
CT45A7
CT45A6
CT45A9
CT45A8
CT45A5
CT45A2
RBM28
ING4
RIN1
BRMS1
B4GAT1
TRMT6
MCM8
S100A13
S100A1
CHTOP
BCAT2
MCRS1
ZNF697
NFIB
CRTAM
TIMM22
WASHC2C
SCRIB
PIGU
DNAJB12
COQ9
CIAPIN1
TAS1R1
NOL9
RAD52
SRSF7
USE1
SLC26A2
H2BC4
H2AC6
CLUH
RFC2
TRMT1
NACC1
VPS28
IFNAR1
HTR5A
PAQR5
TMEM199
SEBOX
POLDIP2
ATXN2L
LRRC29
RPL29
PCBP2
EEF1A1
LRRC59
ARL8B
CNOT2
BCAS4
PGLS
KRT8
NANOS3
BFSP1
KRT18
SLC12A2
SLC25A45
FRMD8
IL24
LRRC52
TMPRSS5
SLX1B
SLX1A
BOLA2B
BOLA2
SULT1A4
SULT1A3
SNRPD1
AAAS
CCDC85B
AMACR
PRR19
PAFAH1B3
FOSL1
FGFBP3
TESK1
TMC1
TOMM22
ZNF513
SNX17
EIF2B4
MIA3
HSPA8
LRWD1
ALKBH4
CSRP1
STT3B
TOMM7
MKNK1
TRIM46
KRTCAP2
SPRED2
TFB1M
MOB3C
ARHGEF12
CDKN2C
FAF1
MPHOSPH10
MCEE
SMIM14
ZNF185
SCO1
ADPRM
FAM20B
LOC112694756
PPP2R2C
CALR3
C19orf44
KCTD5
FAM228B
IPPK
BMS1
CCDC124
TP53I3
SF3B6
ARHGEF7
HSPA9
SASS6
ARID3B
TMEM223
TMEM179B
SRPK2
FOXO3B
ARTN
GPR19
LOC100509620
UNK
H3-3B
RPS6KB2
PTPRCAP
STOML2
PIGO
FAM214B
TAF1B
LMNA
UQCRC1
MFAP3
FAM114A2
SURF2
SURF1
RPL7A
MED22
ZSCAN30
C16orf72
URM1
MSANTD2
OCEL1
PGAP4
ADORA2B
ABCC3
CLDN20
MRPL4
FAM168A
ATP6V0D1
AGRP
SEC14L1
SCAP
ANKRD13D
TRNAU1AP
RPL7
RDH10
MEMO1
ALG14
TUBG2
CYP2E1
SPATA19
DCAF8
NDUFAB1
SMIM12
TDG
C12orf73
WASHC4
ZNF398
ZNF425
ZNF350
ZNF668
ZNF646
ACP6
TPK1
LEKR1
TUT7
USP1
MRPS21
C11orf49
FURIN
SLC35F3
NOL11
PMF1-BGLAP
PMF1
NUP133
PRRT2
MAZ
DYM
ADAR
SOS1
GRB7
MNAT1
LRRC49
THAP10
MAST2
NAA80
IFRD2
HYAL3
SPATC1L
TOB2
STAU1
PSMD6
LDHA
MAD1L1
NUDT1
MRM2
TMEM250
PUM2
INAVA
TRIOBP
DYNLRB2
CAMKK1
DDX27
GPAM
WASHC5
NSMCE2
NDUFB8
HIF1AN
EIF3L
ANKRD54
NUCKS1
TMEM126A
GATAD2B
PDS5A
DPY30
SH3TC1
RFFL
SPRYD4
MRPL39
TIGD6
HMGXB3
THOC5
RICTOR
MAP2K3
NXF1
LUC7L
FAM234A
COX7C
HIRIP3
SAMD1
C19orf67
MISP3
STIP1
PURB
AVPI1
COPS4
QTRT1
ADGRG1
KXD1
CSTF1