ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1177906 | HCT 116
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◢ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◢ SRX535453: A-375

◢ SRX535454: A-375

◢ SRX5501657: A-375

◢ SRX5501659: A-375

◢ SRX5501661: A-375

◢ SRX10131662: Bronchial tracheal epithelial cells

◢ SRX10131663: Bronchial tracheal epithelial cells

◢ SRX20436771: DLD-1

◢ SRX20436779: DLD-1

◢ SRX22001291: DLD-1

◢ SRX22001292: DLD-1

◢ SRX22001293: DLD-1

◢ SRX10715331: HCB1

◢ SRX10715344: HCB1

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◣ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX20230567: Ishikawa

◢ SRX20230568: Ishikawa

◢ SRX20230569: Ishikawa

◢ SRX20230570: Ishikawa

◢ SRX20230571: Ishikawa

◢ SRX20230572: Ishikawa

◢ SRX20230573: Ishikawa

◢ SRX20230574: Ishikawa

◢ SRX10144542: Kasumi-1

◢ SRX10144543: Kasumi-1

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX7366779: MCF-7

◢ SRX7366780: MCF-7

◢ SRX7366781: MCF-7

◢ SRX7366782: MCF-7

◢ SRX7366783: MCF-7

◢ SRX7366784: MCF-7

◢ SRX244177: MM.1S

◢ SRX244180: MM.1S

◢ SRX327758: MM.1S

◢ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◢ SRX1637467: MOLT-4

◢ SRX1637469: MOLT-4

◢ SRX1637470: MOLT-4

◢ SRX24723215: MRC-5

◢ SRX24723217: MRC-5

◢ SRX24723219: MRC-5

◢ SRX24723221: MRC-5

◢ SRX2375362: MV-4-11

◢ SRX2375366: MV-4-11

◢ SRX14127531: OCI-AML3

◢ SRX14127532: OCI-AML3

◢ SRX14127543: OCI-AML3

◢ SRX14127544: OCI-AML3

◢ SRX18455086: OCI-AML3

◢ SRX18455087: OCI-AML3

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◢ SRX4023329: T-47D

◢ SRX4023330: T-47D

◢ SRX728779: THP-1

◢ SRX728780: THP-1

◢ SRX9730732: THP-1

◢ SRX9730733: THP-1

◢ SRX9730734: THP-1

◢ SRX9730735: THP-1

◢ CDK9: STRING

MAMDC2
FRG2C
PMF1-BGLAP
PMF1
PAXBP1
GOLM2
FRG2
TINAGL1
OTUD7A
SLC39A14
COL23A1
UNC45B
NLE1
KCNIP4
NPNT
UBE3C
ZMYM3
CMSS1
FILIP1L
DUX4
TTYH1
COQ8A
C2orf83
FAM236B
FAM236A
DACH1
LRP2
KCNK18
C1orf174
MAPK11
SNX16
SSBP1
CRYBB2
POLG
TNRC6A
ARHGEF35
STK38
SYT2
ITPRIP
NECTIN4
KLHDC9
BAIAP2L2
NBPF1
B4GALNT3
ELMOD1
EPN1
TMPRSS5
FANK1
POLN
HAUS3
TCF7L2
TAT
FAM107B
MUC1
C16orf87
MTRNR2L8
SLITRK3
ELAVL2
SPDYE14
SPDYE10P
FXYD3
ARHGEF5
KRTAP9-9
KRTAP9-6
ART1
TFCP2L1
LOC105370980
CLTC
MTRNR2L2
MSH3
DHFR
CPLX2
LYRM1
DCUN1D3
SCGB1C2
SCGB1C1
ODF3
TBC1D3F
TBC1D3L
TBC1D3B
COL6A1
DYNLL2
MROH9
TSR2
PDIA6
KRTAP2-3
KRTAP2-4
CLEC7A
UBAP2L
C1orf43
ERRFI1
RABL6
CCDC183
TES
CCDC200
CLDN20
TRIM48
RAPH1
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
TMBIM6
NOTCH2
E2F3
EREG
PDE4DIP
ECHDC1
OR8J3
H3C13
H2BC18
MTRNR2L1
CBR4
UBE2Z
SULT6B1
TMEFF2
ELOA2
SUV39H2
ZNF679
PDE6D
COPS7B
ANXA2
ACTB
C11orf97
SPATA16
RAB40B
SLC35B1
APPBP2
SIMC1
UBC
CBWD5
IDNK
DLGAP4
WNT9A
H2BC21
H2AC21
H2AC20
CTAGE4
CTAGE8
ZNF165
OR1F12
HMGA2
ANTXR1
ZP4
PDLIM5
LOC107986453
HNRNPA3
OR14I1
RNF135
PCBP3
CCDC30
SHTN1
KRTAP10-12
PTP4A3
ZNF517
ZNF34
RPL8
SRSF5
ARFGEF1
YBX3
KCTD16
YIPF5
SOX5
LUZP2
OR4C12
NAV3
ACTG1
PCDHB6
ZNF718
ZNF595
DMBX1
H4C14
H3C15
H3C14
H2AC19
H2AC18
MND1
CHEK1
TBL1X
RAB11FIP2
PIN4
LOC102724770
DGCR6
TOB1
MRPL2
KLC4
PTK7
GIMAP7
SPATC1L
TCERG1
NCOA5
GOPC
PCID2
CUL4A
TUBD1
RPS6KB1
DSCC1
SMNDC1
RNASE10
IER3
FLOT1
COMT
ZHX1-C8orf76
ZHX1
TXNRD2
ADAM15
CLUL1
SLC25A32
DCAF13
CCDC85B
STRIP1
FOSL1
MFAP3L
TBC1D3H
TBC1D3G
TBC1D3K
TBC1D3I
TBC1D3E
TBC1D3D
TBC1D3C
TBC1D3
HNRNPA2B1
CBX3
ARHGAP39
STK3
H4C15
UBR5
SLC12A8
EIF3F
NFE2L1
SPIDR
DIRAS2
DHRS9
CD163L1
GABRA2
OR6P1
GABRG1
GRHL2
RNF19B
FBXO11
SPATA22
ASPA
TMSB10
EGR1
PCMTD1
PCDHB5
VCP
FANCG
ID1
SLC25A3
SRPRB
PRKAR1A
HECTD3
USP25
UBE2O
AANAT
FH
H2BC17
H2AC17
H3C12
CSNK1G3
H3-2
KRT19
KRT15
FAHD2B
PLA2G7
SLC25A31
CYP11B1
RPS20
MRPS23
ECH1
RAB4A
LGALS4
CYP2A13
ZCCHC4
PTEN
KLLN
MFSD14B
NCK1
SEC22B
MBNL2
FRMD3
CSNK2A2
PRR20G
MFSD11
METTL23
SRSF2
EEF1A1
JMJD6
ZNF280D
SLC22A23
ERMARD
ABHD10
EBPL
NGB
RECK
ELOVL6
H2AX
DPAGT1
HMBS
UBE2V1
SCAF11
LMBR1
PGBD2
ATF1
HSPA6
CTNNA1
GALNT10
CNTLN
DTD1
F2RL1
LRRTM2
CPSF6
DR1
CEP120
FMNL2
BZW1
MAML1
RMDN1
CPNE3
NEMP2
ZFP36L1
RXFP3
NSFL1C
PDXDC1
TRIB1
SLC16A5
ACSL3
POLR2M
XPC
LSM3
MRPS26
GNRH2
TEX10
OGFOD3
HEXD
FGGY
ZBTB38
TTLL7
AREG
MAP3K2
SLC30A10
CXCL2
IQCF2
PHKA1
AFTPH
OSER1
ENTPD7
GCFC2
C7orf26
ZFP3
ARHGAP28
OR6C70
NRROS
SLF1
KIAA0825
TMEM71
PHF20L1
EXOC6
HERC6
CBR3
BRAF
IGFBP4
SLC5A8
CKS2
SECISBP2
RPL18A
ADAP1
KRTAP2-1
KRTAP2-2
VWA2
TMPRSS6
DNAJC25-GNG10
DNAJC25
SLTM
ZFP91
LPXN
BAGE5
BAGE4
BAGE3
BAGE
GPD2
RCN2
IGDCC3
SMIM31
HMGB1
UBE2D1
OGA
ZNF800
SMARCD2
FAM8A1
NFE2L3
SEC61A1
KANSL1
DUSP5
CEP55
LRRC58
PPP1CB
RAD21
CCSER1
CIB2
TULP4
CBWD3
PTMA
MALSU1
HDLBP
KRTAP1-1
ANKRD18B
VANGL1
PLEKHG1
SLC4A4
MID1
HORMAD1
TMEM43
CHCHD4
CHD1L
H2BC4
H2AC6
SLC30A5
GOLGA6L10
PCDHGA1
PLEKHA8
FKBP14
RMI2
TBC1D5
FBXO34
SMC6
GEN1
NMI
PCDHGA2
CTAGE15
GPR15
CLDND1
DDX59
EXOC2
SGK3
FAM149A
METTL7B
NUTM2D
CCDC88A
PARP2
EXT1
EIF3A
CACUL1
SLC20A1
SCO1
ADPRM
TRIM26
FAM120B
XYLB
INPP5F
EPM2A
FDX1
PCDHB16
PCDHB8
PCDHB7
PSKH2
WDR43
LRRC37A3
PSMC5
FTSJ3
RMND1
ARMT1
SFT2D3
MINPP1
MRPL15
MTHFS
RESF1
OXR1
OR8B3
KCNS1
TBL3
RPS2
RNF151
NDUFB10
RPL3L
UHMK1
H4C9
H2BC11
H2AC11
SCAF4
APEH
SIRT5
CRPPA
FBXL4
PHTF1
HNF4G
FAM160B1
SPATA13
ZNF705E
TTC5
FAM221A
SLC35F3
ADAD1
DUS1L
SRRM2
MIDEAS
NFKBIZ
INO80D
NDUFAF6
ZKSCAN1
HSF1
BOP1
NEUROG2
MLYCD
ADCY6
CADM2
EGFR
PCDHB12
PCDHB13
PCDHB14
ZFHX4
TM4SF1
CBWD6
LRRC59
SLC38A9
KBTBD8
SLC38A2
CKAP2
VPS36
CLN5
GRPEL1
PROSER1
NHLRC3
NR4A2
C5orf63
MTAP
LEPROTL1
SPG7
NFIB
SPIN2B
MAP2
GRK3
CLCA2
CHIC1
SPIN2A
ITPRID1
DAZ4
DAZ3
GNAL
WASF1
CDC40
FEM1B
GBE1
LOC100287896
LIPT2
NOMO3
FECH
ENTPD6
ABCC6
GCLM
UNK
H3-3B
TFRC
RWDD2B
FRG1
TTBK2
TRRAP
TMEM130
GPRC5C
TKT
NCOA6
SPATA6
KRTAP4-6
KRTAP4-5
ACOX3
TRMT44
HNRNPL
EIF3C
MKRN2OS
MKRN2
SUPT20H
KLHL7
WDR1
DENND4A
ITGA6
SNX9
SH3BP5
MAP3K21
MAEL
ILDR2
ENGASE
MST1L
PCDHB2
PCDHB3
REXO1
ARHGAP19
DHX35
TXNDC12
BTF3L4
STK40
SLC7A5
SCYL2
DEPDC4
CUL1
SPTBN1
GOLGA6L7
IGDCC4
UMOD
WDR4
ARRDC4
CHMP7
GCNT1
PCLO
CDK17
IL10RA
KITLG
EMB
MARS2
NCKAP1
LRP11
THSD7B
RPS19
C10orf95
RAB18
GSTO1
LIG3
EPB41
POMGNT2
NDEL1
MED13
PAM
RAN
USP10
WASHC1
AK4
CABCOCO1
PPP1R2B
ZSCAN25
JMJD1C
RNASEH1
ZDHHC3
EXOSC7
SEPTIN4
FKBP1A
WDR45B
HOMER1
MTERF1
IQGAP2
FAM193B
VEZF1
LAMTOR4
MAP11
BFSP1
GFOD2
EIF2B2
TMX4
TMEM268
TAPT1
INPP4A
ZNF664-RFLNA
ZNF664
CCDC92
ZBTB7C
MLLT3
FA2H
ELAPOR1
PCDHA6
PCDHA5
SARDH
TMEM70
ELOC
RPS6
USP36
PET117
KAT14
TRIM25
SMC3
EHD4
SYBU
PANX1
NDFIP1
TPD52
EYA1
SLC25A12
REST
ATMIN
C1QTNF12
SPHKAP
GPS2
EIF5A
NOCT
UBALD2
NFRKB
CKAP5
IMPACT
ERN1
PTK2
VOPP1
DIS3
CLK4
GEMIN4
RANBP9
ZFHX3
ODC1
C3orf70
PTPRA
MYZAP
GCOM1
FLT4
SAMD4A
XKR6
GGT2
TMEM202
NXF1
ABRAXAS2
DDX1
CDK8
ZNF124
TRMO
MCL1
TMED7-TICAM2
TMED7
ARL17B
IRF2BP2
KCTD18
FUCA2
NUDT3
ASAP1
LRRCC1
ARL17A
XPR1
SLC7A1
SPEF2
PDCD5
ATP2A2
LPGAT1
DEPDC7
HEMGN
IRAK3
SLC35G5
FAM207A
BANP
DNM1L
MUS81
CFL1
TIMM23B
PARG
UBE2J2
SCNN1D
TRMT1L
SWT1
YBX1
CPOX
LYST
KAZALD1
GRK5
LGALSL
FMO5
SLC16A2
ZNF337
UBE2B
CDKL3
RANBP2
R3HDM2
INHBC
CLK1
MALL
SMAP2
SREBF1
TYMSOS
TYMS
SH3D19
CST3
IDH2
CD38
KRTAP9-3
KRTAP9-2
TCL1A
STX18
PEX3
ADAT2
INTS9
HMBOX1
STX10
IER2
SLC25A36
SPDYE6
LOC100289561
TIFA
PELI1
MAGEF1
PTDSS1
MTERF3
DSE
ARSG
PCTP
SLC16A6
PER2
PKP4
CCDC148
NDUFA6
CEP68
MYO18A
TSPYL4
RWDD3
CFLAR
FAM220A
MKI67
DOCK10
TRIM47
GMNC
PRKCH
KANK1
MAP3K14
ARHGAP31
NIBAN1
HOXB9
STK32B
GBP2
RORB
LRRC36
LAMA2
GYS2
SEC13
EIF4A3
PSTK
KPNA1
GAPDH
RAD23B
TBC1D14
MFSD14C
RABEP1
PAAF1
AEN
TRIM39-RPP21
TRIM39
FAM86B2
PTS
TMEM17
DYNC1LI1
TMEM65
CXorf38
DDIT4L
LOC100996750
KRTAP4-7
RAET1E
TRIP12
FBXO36
STOML2
PIGO
CNP
SLC25A4
CITED2
AP3M2
MLEC
COG1
ZDHHC7
HDDC2
CD55
MIB1
PLAAT1
TWSG1
MYO5A
STEAP3
SULT1B1
MORC4
PSD3
SLCO6A1
ZFP42
IDO1
SOD2
WTAP
WAPL
H2BC14
H2AC14
YPEL2
TXNDC15
PTP4A1
INTS6
KDF1
MACROH2A1
C9orf85
ABHD17B
VPS35
POLR2D
TMEM229B
ELAC1
IQSEC3
NTAQ1
TMEM251
MOAP1
SLURP1
H3C10
H2BC13
H2AC13
PLEKHH1
GCSH
SCN8A
OTOP1
PRAMEF33
PRAMEF10
GHITM
DBP
SERP1
EIF2A
RFX3
ZNF623
KDM3A
TBCD
JOSD1
GTPBP1
MIF
MAFF
RPL30
ARHGAP32
NEDD4
NOMO1
ARHGAP29
APBB1IP
DPY19L2
ANO2
MUC12
KRT1
PDCD4
DPH2
B4GALT2
ATP6V0B
AMMECR1L
ADAR
APOLD1
CDKN1B
NUP50
STK35
RALY
CPT2
OCIAD2
CA8
MPP7
BAG3
PXK
SPOPL
SPX
PHF11
KRTAP4-8
KRTAP4-11
KRTAP4-12
SLC12A5
ZNF80
CASR
TESK2
MMACHC
BOD1
COG2
TIMM23
C7orf25
KMT2E
DDX42
CCDC47
CMTM7
DDX17
KLHL9
SMIM19
SLC20A2
TEX9
CEBPG
ADI1
RFX7
MTUS1
TAB2
BACH1
ZBTB34
REEP3
TDRD7
PITPNC1
UNC79
BTBD7
OR2A7
EIF2D
NKIRAS1
TMEM109
PRPF19
NFYC
ERI1
EXO1
CUL7
TRIP6
SRRT
TOMM34
STK4
CENPS-CORT
CENPS
OAT
BLCAP
STRIP2
MAGI3
NNAT
GNPNAT1
PARD6B
PANK1
AXL
NR1D2
PRDM2
RNF32
BCAP29
ARHGAP42
EFR3A
TLK2
VBP1
DSG2
PATJ