ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX2375362 | MV-4-11
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◢ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◢ SRX535453: A-375

◢ SRX535454: A-375

◢ SRX5501657: A-375

◢ SRX5501659: A-375

◢ SRX5501661: A-375

◢ SRX10131662: Bronchial tracheal epithelial cells

◢ SRX10131663: Bronchial tracheal epithelial cells

◢ SRX20436771: DLD-1

◢ SRX20436779: DLD-1

◢ SRX22001291: DLD-1

◢ SRX22001292: DLD-1

◢ SRX22001293: DLD-1

◢ SRX10715331: HCB1

◢ SRX10715344: HCB1

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◢ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX20230567: Ishikawa

◢ SRX20230568: Ishikawa

◢ SRX20230569: Ishikawa

◢ SRX20230570: Ishikawa

◢ SRX20230571: Ishikawa

◢ SRX20230572: Ishikawa

◢ SRX20230573: Ishikawa

◢ SRX20230574: Ishikawa

◢ SRX10144542: Kasumi-1

◢ SRX10144543: Kasumi-1

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX7366779: MCF-7

◢ SRX7366780: MCF-7

◢ SRX7366781: MCF-7

◢ SRX7366782: MCF-7

◢ SRX7366783: MCF-7

◢ SRX7366784: MCF-7

◢ SRX244177: MM.1S

◢ SRX244180: MM.1S

◢ SRX327758: MM.1S

◢ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◢ SRX1637467: MOLT-4

◢ SRX1637469: MOLT-4

◢ SRX1637470: MOLT-4

◢ SRX24723215: MRC-5

◢ SRX24723217: MRC-5

◢ SRX24723219: MRC-5

◢ SRX24723221: MRC-5

◣ SRX2375362: MV-4-11

◢ SRX2375366: MV-4-11

◢ SRX14127531: OCI-AML3

◢ SRX14127532: OCI-AML3

◢ SRX14127543: OCI-AML3

◢ SRX14127544: OCI-AML3

◢ SRX18455086: OCI-AML3

◢ SRX18455087: OCI-AML3

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◢ SRX4023329: T-47D

◢ SRX4023330: T-47D

◢ SRX728779: THP-1

◢ SRX728780: THP-1

◢ SRX9730732: THP-1

◢ SRX9730733: THP-1

◢ SRX9730734: THP-1

◢ SRX9730735: THP-1

◢ CDK9: STRING

ARL4D
VASP
NLRP12
LOC102724770
DGCR6
FRG2C
DUX4
NFKB2
CDCA3
LAMP1
GATA4
AKR1C3
MAMDC2
CMPK2
DENND3
FMNL3
LILRB3
LILRA6
LILRB5
WDFY3
MTRNR2L1
GNA15
SPATC1
ABT1
PLSCR1
TMEM45B
WDR74
STX5
AGTRAP
PGK1
STEAP4
OR10J1
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
SFTPD
PDLIM2
GSTA4
CALR3
C19orf44
XRCC5
BOD1
NIBAN3
NAA80
IFRD2
HYAL3
GPAA1
EXOSC4
FEM1A
CBFA2T3
TNFAIP8L2-SCNM1
TNFAIP8L2
SCNM1
LYSMD1
TMOD4
H4C12
H4C11
H2BC14
H2AC14
FRG2
ZNF444
SMPD3
KLF2
CTDSP1
CTTN
PPIAL4H
PPIAL4G
NEUROG1
GSPT1
ADGRG1
RPS19
ZFAT
CHMP4B
SEMA4B
H2BC15
H2AC15
FGF6
TMEM39B
SLC18A2
RNF149
DCP1A
PSTPIP1
SPDYE13
SPDYE9
SPDYE8
SPDYE15
SPDYE11
SCAF1
RRAS
DMPK
DMWD
NLRP2
UBXN8
NUDT4B
NUDT4
CMIP
PEX3
ADAT2
NUDCD1
DCAF12
DYNC2H1
SLC12A6
NUTM1
NOP10
KBTBD6
ZFYVE28
CFAP99
SORBS3
RPL36
MICOS13
HSD11B1L
TMEM243
DDX58
NDUFS7
GBA
NBN
MEF2C
FBXW4
CCL26
CYTH4
CXCL8
NBEAL2
CCDC12
ZNF221
EXD1
CHP1
BCL3
MTF2
ZCCHC4
ZDHHC3
EXOSC7
CSF1R
SH3BP2
DNAJC5B
JRK
DPY19L4
PBK
PANK4
HES5
MRGPRG
MRGPRE
CYRIB
GPBAR1
PNKD
AAMP
PRSS3
TOR1AIP2
TOR1AIP1
NDFIP2
MED23
PPP1R12C
TSSC4
MTMR9
ARHGEF1
CD79A
GPR88
MTIF2
PAFAH2
INTS9
HMBOX1
SIGLEC1
TMTC3
CEP290
GRPEL2
TSNAXIP1
RANBP10
KBTBD7
APOL6
ZBTB45
SLC27A5
AXL
H2BU1
H2AW
POMP
NFATC3
NCF2
EAPP
DAZAP2
TYROBP
NFKBID
HCST
ZC3HAV1
PGBD4
EMC7
CLPB
H4C14
H3C15
H3C14
H2AC19
H2AC18
H4C15
AP2B1
PEX12
SREK1IP1
CWC27
CD1A
ST3GAL2
GTF2H2
GNG2
TRPV4
C1orf159
CYP4V2
JOSD2
ASPDH
SLC1A5
TLR4
TBPL1
RPS20
PRR5
ZNF554
TPRKB
MAPKAPK3
CISH
FBXW11
ACTN2
HSH2D
CCAR2
C8orf58
SLC25A10
MRPL12
IL1B
UCKL1
IL7R
ZC3H6
LRRC37A3
SLCO2B1
SH2D3A
VAV1
AKR1A1
ARID5A
PEMT
BANK1
ZNF718
ZNF595
USP3
KMT2B
GLRX
FAM207A
TMEM104
NAT9
CD33
RIPK1
TMBIM4
BMF
CALM3
PPP5D1
HPSE2
NUF2
CD40
MRPS31
H3C13
H2BC18
SLC39A13
MS4A3
BTRC
DRG2
DTX2
KANSL3
FER1L5
SYMPK
FOXA3
SF3A3
SSBP2
VCPIP1
C8orf44-SGK3
DOCK8
NPRL2
TMEM115
CYB561D2
FRG1
AURKAIP1
TIMM21
FBXO15
FAM227B
DTWD1
TPCN1
IQCD
ADAM28
MEFV
PHF2
CTU1
LILRA3
PTK2
FRA10AC1
COL8A2
C10orf105
ICAM1
TMEM91
B9D2
TGFB1
MRPS18C
HELQ
TRDMT1
PLEKHM3
BORCS7
RBCK1
ARHGAP35
AP2S1
IPPK
B4GALT3
SIGLEC9
ZNF76
SLC27A3
DHRS12
RPS5
ODF3L2
MADCAM1
NAIP
RNF220
RAB24
PRELID1
MINDY3
ZSCAN22
CCDC9
PPP6R1
PRKCE
SST
TCEA2
BAZ1A
NR3C1
FLT3
A2M
TNFRSF10B
CES1
HLA-DOA
CHPF2
ABCF2-H2BE1
ABCF2
HIBCH
OLFML2B
SSBP1
ARPC3
LRP3
KIAA0895L
EXOC3L1
E2F4
ELMO3
SLC24A1
LCMT2
ADAL
EXT1
RFX2
ARHGAP25
UNC45A
HDDC3
TAL1
PAF1
MED29
ZFP36
INO80D
WNT2B
H2BC5
H1-4
HDGF
MRPL24
SEPTIN9
ZNF175
TMEM222
SCRIB
CCDC200
THAP1
H4C3
H1-6
SPPL2A
ANKRD40
PROB1
SPATA24
LYN
IPCEF1
SCNN1A
LTBR
PI4K2B
ADGRE2
TMEM68
TGS1
ITGA4
LRRC59
CHMP7
TLE6
DDX23
GHRL
PSME3
BECN1
MAP3K5
GTF2H3
EIF2B1
LARS1
GNB4
CXCL1
TESK2
MMACHC
POLRMT
FGF22
PROS1
ARL13B
RPL29
RMDN2
DNAJC10
UBAP1
POLE4
RASA1
DENND4B
ZNF333
ZNF780A
ARID3B
SLC38A10
SPDYE12P
TAF1B
CHCHD5
SNX11
CBX1
VPS13B
DRAP1
C11orf68
PYCR3
GFUS
MUCL1
TMEM11
JMJD1C
MRPL34
DDA1
ABHD8
CEBPD
TOMM22
BNC2
NSMAF
TMEM204
ASGR2
ZNF513
SNX17
EIF2B4
KEAP1
LIM2
C19orf84
SPINK8
RRM2B
DNAH2
EFNB3
PPRC1
FAM180B
NDUFS3
KBTBD4
FAM228B
SIRT2
NFKBIB
TP53I3
SF3B6
LRFN3
TRIM41
POLR2J3
RNPEP
RPS3
MAPK1IP1L
NEDD9
ALOX15
EIF2D
ZC3H3
ZNF148
MRPL30
MITD1
STAT1
ANXA2R
APPL2
FUT10
ANKRD18B
ITGB2
NSFL1C
H1-2
KLHL33
SLTM
XCR1
KIF25
RUBCNL
INVS
ERP44
ELOB
PRSS33
ZFP64
KASH5
H4C4
H3C4
H2BC6
BRF2
RMND1
ARMT1
ADGRE1
RPS15
CCPG1
C15orf65
DR1
ALDOA
CCR5
CCR2
ZNF180
TDRD9
ATP5MPL
INO80C
RAC2
GNA11
TMEM39A
POGLUT1
SAT1
MRPS28
TNFAIP1
IFT20
FBXL19
MAPKBP1
LYRM1
TTC33
COX18
DNAJC11
PSMF1
INTS12
GSTCD
PEAK3
LTB4R2
LTB4R
CIDEB
NOD2
PPIAL4F
PPIAL4E
PPIAL4D
OPA1
ZNF286A
ZNF410
INPPL1
FOLR2
RGS12
HMGB1
USPL1
UCHL5
RO60
IER3
FLOT1
SNUPN
TIMM10
SMTNL1
SMC6
GEN1
CD1C
LILRA2
AARS2
SIRT6
ANKRD24
ADAP1
MOB4
CHD1L
EFCAB2
PRKAB2
KIAA0930
NOTCH2
LMO2
LRRC71
PIWIL4
PHB
TRABD2A
ZFYVE1
RPL27
IFI35
NTAN1
ZNF749
GTF3C6
FNTA
SEC14L1
RHBDL1
DPY19L3
RHOT2
GPR15
CLDND1
RPL5
SLC44A1
CHST13
PLAT
TSC1
GFI1B
RPS9
FBXW7
NCBP3
WDR55
DND1
ZAR1L
BRCA2
PRKD2
RASSF4
REXO1
DSCC1
TMEM242
C6orf89
ZNF350
RALB
ASNSD1
ASDURF
GPR68
PSMA8
ADGB
RPS6KA1
DCSTAMP
JUND
TBL2
RASSF2
CTSG
WDR87
SIPA1L3
TMEM229B
TP53I11
POR
AP3M2
ECSIT
CNN1
TRIM25
CALR
RAD23A
NDUFB8
HIF1AN
HNRNPUL1
PIP4K2B
RBM28
SPRED2
FOXS1
NPY4R2
NPY4R
CCDC124
CFAP298-TCP10L
CFAP298
LILRA4
ACTRT3
MYNN
TRIM44
ANKRD39
SEMA4C
SIGLEC11
LIPM
NDUFB7
TSSK6
NDUFA13
PDXK
INTS10
SDSL
ZNF225
ARHGEF18
PCM1
KMT2A
RPP38
ACBD7
ENOSF1
RFESD
REX1BD
AP1B1
DNAJB2
CTSB
CEACAM21
RNF125
RASSF5
FZD1
REEP3
ERMARD
TMEM123
LRRC29
TSC2
NTHL1
SAMD1
C19orf67
MISP3
VSIR
MRPL44
SNRNP200
DHX8
OBI1
H3C8
H2BC10
HCK
HPS6
ARMH3
KCNK9
PA2G4
COPS7A
PRRG2
NOSIP
SIRT1
RUNX1
BLOC1S5
SDHAF3
TRAM1
USP32
YES1
LIFR
CCER2
DCANP1
PNPLA6
POLR3B
RSU1
LHX9
C1orf53
PIK3CG
TSG101
SLC35E2A
SGF29
TMEM231
TFPT
PRPF31
S1PR4
NCLN
MARCHF7
RSAD1
CHAD
EDDM13
SLC33A1
PARK7
SCRT1
DGAT1
ERICH4
DMAC2
DCLRE1B
AP4B1
KCTD18
ANKRD46
SMPD1
PPP2R2B
CCDC152
HEXIM2
NOTCH1
H4C6
LTB
LST1
H4C7
H3C7
PLEKHG3
H2BC9
NCR3
SLC12A3
UBIAD1
RRS1
ADHFE1
DHX16
MLLT1
PPP1R18
NRM
NFE2
RCC2
ABCA9
BRWD1
PGBD2
HMOX1
RPIA
RCOR3
SLC4A2
CDK5
ASIC3
EMP3
CCDC114
TEFM
NUP54
RAB4B
MIA
ERMAP
SVBP
BID
LAMB3
EXOSC3
HINT3
ZNF557
NFKBIA
MTRNR2L6
UNK
H3-3B
RPS7
CCDC97
ZNF226
PLIN5
LRG1
INPP5D
MDM4
TRAK2
STRADB
GTF2A2
AHCYL2
UTP3
TSPAN10
NPLOC4
ZSCAN30
TRIB1
MRPS23
PRSS36
PRSS8
PIP4K2A
ATXN2
PSMA1
CAPN15
H4C2
PISD
H4C1
H3C1
H1-1
H4C13
H3C11
H2AC16
H1-5
TRIP4
PCLAF
HSPE1-MOB4
HSPE1
HSPD1
WASHC4
TOMM6
PRICKLE4
FRS3
TXNDC15
CIPC
RMDN1
CPNE3
LSM14A
MYC
CRH
CPQ
SYNE3
DSTYK
UBE2T
PPP1R12B
H4C9
H2BC11
H2AC11
H2BC12
H2AC12
WDR41
MAP1S
KDM4B
GARS1
ZNF358
MCOLN1
RFC2
TEX22
CLPP
MACROH2A1
SNRPB
FKBP1A
PEX2
DISC1
STON2
MAIP1
MRPL3
RAD54L2
THOC3
ZNF227
NEUROG3
SLC39A1
CREB3L4
CRTC2
CCDC150
RBM17
LY6D
SLURP2
LYNX1-SLURP2
LYNX1
HENMT1
MS4A6A
THEM4
BIRC2
HIGD2B
BBS4
EEF2
POLR2M
MRPL1
PTK2B
TRIM35
MYO18A
GAS6
CCDC88A
C8orf33
LONP1
CATSPERD
CDKN2AIPNL
GTF2H2C_2
GTF2H2C
POLR3D
HUS1
ANKRD13D
PDE6D
COPS7B
SEC13
SCGB1C2
SCGB1C1
ODF3
ZNF235
MRPL16
PPIL2
ZNF623
ZNF558
MBD3L1
RYK
EIF4G3
ALOX5
UNKL
C16orf91
PERCC1
STOML1
PML
SUN1
FMNL1
FIGNL2
PIK3AP1
APBB1IP
STING1
H2BC21
H2AC21
H2AC20
SLC35B4
MAK16
FEM1B
TLN1
CREB3
TNIP1
H3C3
DHRS7B
H2BC3
CEBPA
GSK3A
ZNF696
PLCXD2
CAPNS1
MRPL21
IGHMBP2
CTDP1
GABPB1
SOX6
C11orf58
MAN2C1
MED4
PLD3
C19orf47
ROM1
EML3
B3GAT3
SCAMP1
OLFML3
CAPG
PDSS1
SYCE2
EPHB4
BLID
PRCC
EMILIN1
OST4
METTL25
CCDC59
KHK
CCND3
YARS1
S100PBP
CLK3
POGLUT3
ARHGDIB
IRF9
IL1RN
CDK5RAP1
C10orf88
UBTF
SNCA
AVEN
GAB2
SERPINE1
SIGLEC6
BRIX1
TMEM70
ELOC
USP15
FAM3C
TPM4
SMAD5
QSER1
PECAM1
STK25
POLG
TNFRSF10A
NINJ2
ZNF512
C2orf16
ATG16L1
ZNF331
RECQL4
LRRC14
MFSD3
GPT
UPF1
OCSTAMP
SPHK2
RPL18
FAM83E
LUC7L2
MLLT11
FMC1-LUC7L2
FMC1
TATDN1
NDUFB9
GABPB2
IQGAP2
BSG
FCGR3A
NRGN
TEX44
TIMM50