ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX728780 | THP-1
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◢ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◢ SRX535453: A-375

◢ SRX535454: A-375

◢ SRX5501657: A-375

◢ SRX5501659: A-375

◢ SRX5501661: A-375

◢ SRX10131662: Bronchial tracheal epithelial cells

◢ SRX10131663: Bronchial tracheal epithelial cells

◢ SRX20436771: DLD-1

◢ SRX20436779: DLD-1

◢ SRX22001291: DLD-1

◢ SRX22001292: DLD-1

◢ SRX22001293: DLD-1

◢ SRX10715331: HCB1

◢ SRX10715344: HCB1

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◢ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX20230567: Ishikawa

◢ SRX20230568: Ishikawa

◢ SRX20230569: Ishikawa

◢ SRX20230570: Ishikawa

◢ SRX20230571: Ishikawa

◢ SRX20230572: Ishikawa

◢ SRX20230573: Ishikawa

◢ SRX20230574: Ishikawa

◢ SRX10144542: Kasumi-1

◢ SRX10144543: Kasumi-1

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX7366779: MCF-7

◢ SRX7366780: MCF-7

◢ SRX7366781: MCF-7

◢ SRX7366782: MCF-7

◢ SRX7366783: MCF-7

◢ SRX7366784: MCF-7

◢ SRX244177: MM.1S

◢ SRX244180: MM.1S

◢ SRX327758: MM.1S

◢ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◢ SRX1637467: MOLT-4

◢ SRX1637469: MOLT-4

◢ SRX1637470: MOLT-4

◢ SRX24723215: MRC-5

◢ SRX24723217: MRC-5

◢ SRX24723219: MRC-5

◢ SRX24723221: MRC-5

◢ SRX2375362: MV-4-11

◢ SRX2375366: MV-4-11

◢ SRX14127531: OCI-AML3

◢ SRX14127532: OCI-AML3

◢ SRX14127543: OCI-AML3

◢ SRX14127544: OCI-AML3

◢ SRX18455086: OCI-AML3

◢ SRX18455087: OCI-AML3

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◢ SRX4023329: T-47D

◢ SRX4023330: T-47D

◢ SRX728779: THP-1

◣ SRX728780: THP-1

◢ SRX9730732: THP-1

◢ SRX9730733: THP-1

◢ SRX9730734: THP-1

◢ SRX9730735: THP-1

◢ CDK9: STRING

DCAF12
MAMDC2
RLF
GNA15
CCAR2
C8orf58
ZNF684
IPPK
EXO5
PRSS3
ZMPSTE24
TMCO2
CD40
CD33
CAP1
NCF2
ZFP69B
TNFAIP8L2-SCNM1
TNFAIP8L2
SCNM1
LYSMD1
TMOD4
UBAP1
CMIP
MAP3K5
GRPEL2
MTMR9
LAMP1
ARL4D
B4GALT3
ALOX5AP
SH3BP2
CD1C
NDRG1
PSTPIP1
CAB39
GLRX
ITGB2
DUX4
TEAD3
ZDHHC3
EXOSC7
RPS19
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
WDFY3
CSF1R
LGALS8
NFYC
NLRP12
LILRB3
LILRA6
LILRB5
ITGAM
RXRA
SUN1
TMEM45B
NCF1
MFSD2A
DEFA1B
DEFA1
VASP
ZNF696
PNP
PIP4P1
STEAP4
RAB3IL1
PGA3
NDUFS2
ADAMTS4
WDR74
STX5
SNRNP200
VASH1
S100A8
IL1B
RAB24
PRELID1
TLE3
CDKN2C
FAF1
DENND3
PGK1
VTA1
NMBR
SMAP2
AGTRAP
SPATC1
ZFP69
PPT1
TSSC4
HAUS6
IL7R
HBS1L
CD244
ABT1
GPBAR1
NLRP2
MTF2
AXL
FRG2C
ARHGAP30
TDRD10
SHE
EXOSC3
SETDB1
PGA5
MRPS18C
HELQ
CITED4
TRIT1
AKR1A1
SP140
SP110
IPCEF1
RMND1
ARMT1
APOA2
CEBPD
FCER1G
ITLN1
FLI1
RASA1
EXT1
GPA33
SLC12A6
NUTM1
NOP10
PGA4
PTTG1IP
TP53I11
HDGF
MRPL24
TMEM154
ARPC3
PPIH
SLC38A10
COL9A2
KLHL33
SNAPC3
FRG2
CCDC200
SDCCAG8
CEP170
IL16
RMDN1
CPNE3
DUSP7
PDLIM2
ZP3
SSC4D
SASS6
FCGR2B
ZNF408
ARHGAP1
NAA80
IFRD2
HYAL3
FCAMR
NUF2
RNF149
F11R
NDFIP2
MTPN
LUZP6
CCND3
PRR5
OR52K2
SPDYE13
SPDYE9
SPDYE8
SPDYE15
SPDYE11
MMP9
POMP
UBR7
GON7
RNPEP
VCPIP1
C8orf44-SGK3
THYN1
ACAD8
SREK1IP1
CWC27
CXCL8
ID1
CARD8
AKR1C3
UCKL1
CMTR1
LAMB3
HIBCH
FAM207A
MIA3
ARPC2
LOC102724770
DGCR6
SIGLEC11
ZNF718
ZNF595
TLE4
PDF
NIP7
COG8
CTDSP1
SRSF11
LRRC40
NUBP1
RASSF5
SLC25A32
DCAF13
DISC1
GPR68
TDRD9
ATP5MPL
RPL37
CARD6
FOXJ3
ZNF410
HEATR1
RAPGEF1
TESK2
MMACHC
CBWD5
CBWD3
MSH6
RUNX1
FEM1A
TIGD4
ARFIP1
VPS33B
PPIAL4F
PPIAL4E
PPIAL4D
PPP1R12C
RWDD1
PTK2B
TRIM35
PAQR8
USP3
CEACAM21
ATG5
UBAP2L
C1orf43
TBL2
EIF2D
TOMM34
STK4
EIF3D
SORBS3
URM1
YES1
TFB2M
CNST
MRPL2
KLC4
CUL7
MAP2K1
SUSD6
EPRS1
RPS9
CD79A
KHDRBS1
MTFP1
CYRIB
SELENOH
MEFV
KRT36
KRT13
ZNF484
ADGRE1
NIBAN3
ANKRD33
INTS9
HMBOX1
DNAJC10
ADGB
DCP1A
CHMP4B
PCM1
RUBCNL
OAS3
MRPS31
TTC14
UBXN8
IFNGR1
SFTPD
MPL
TMEM59
TCEANC2
RTF2
MOB4
TMEM30A
USF1
TSTD1
GABRR2
UCHL5
RO60
DOCK8
HMGB1
USPL1
TNFAIP1
IFT20
KCTD12
TIPRL
FCRL4
CPLX1
TMEM127
CIAO1
ARID2
TOMM20
WDR55
DND1
MAP1S
PAPOLB
SERPINB13
SCRT1
DGAT1
EAPP
WDR70
NUP155
LYRM1
TGFBR2
CPNE5
TIMM21
FBXO15
KIF5C
MDM4
PDE4DIP
SEPTIN9
AP2B1
PEX12
LYN
PISD
MED18
MXD3
ZNF197
CCL26
DCAF10
GTF2H2
AOPEP
LTB
LST1
NCR3
TPRKB
DUSP6
GPAA1
EXOSC4
XRCC5
SIGLECL1
FPR2
FPR1
ATP6V1C1
RGS12
DMRT2
UXS1
ARHGEF10
TAGAP
TTC13
ARV1
ZNF517
ZNF34
RPL8
ZMAT2
HARS2
HARS1
INPP4B
STYXL1
SCRG1
WDPCP
MDH1
MTRNR2L8
NFATC3
STK36
RNF25
KIFAP3
UTP3
STK10
CLIC5
DUSP4
MYBL1
NOTCH2
NECAP2
TMEM104
NAT9
INAVA
LCP2
KBTBD6
ARHGEF1
CD1A
TNIP1
C4orf3
TMEM231
RNASE10
RGL1
ARPC5
CXCL1
ZDHHC19
SIGLEC9
OSCAR
NDUFA3
SCAF11
TBL3
RPS2
RNF151
NOXO1
C6orf89
NOXA1
VPS13C
CCL2
ACTRT3
MYNN
NFKBIL1
DDX39B
ATP6V1G2
RTCA
SLC33A1
TEKT2
ADPRS
PRPF3
TLE6
PDCD2
SCAMP2
CTSG
MAP3K7CL
CCT8
TMEM53
ARMH1
ZNF267
TNS1
IKBKE
MR1
RCHY1
WNK4
VPS25
UBLCP1
FAM180B
NDUFS3
KBTBD4
GCLC
TCF12
EIF2B3
P3H1
TRABD2A
TFIP11
FCAR
MIDEAS
TPT1
MTRNR2L2
MSH3
DHFR
TRIB3
NOL11
SNX19
DR1
RNF141
CTSB
MRPS23
FAM167A
LRFN3
ASXL2
CCL3L3
CCL3L1
DDO
ZNF622
ZNF227
RRS1
ADHFE1
SPDYE16
EMILIN1
OST4
KHK
FKBP1A
PKD2L2
OSM
ATG16L1
PIGM
NSUN5
WNT2B
FUCA1
RAC2
PEX3
ADAT2
UBE2T
PPP1R12B
MFN2
CBWD6
CBWD1
TLN2
HAX1
MTRNR2L1
MFSD10
ZFYVE1
SDHAF3
FBF1
N4BP2L2
ROPN1L
THEMIS2
CCL17
HM13
MARCO
SCAF1
RRAS
ACAD9
PSMD7
OTUD7B
KIF25
APPL2
TADA1
SF3B1
OTULINL
TRPV4
VIT
ARHGEF12
CHCHD5
GOLGA7
MYCL
TRIP4
PCLAF
B3GALNT2
KIAA0895L
EXOC3L1
E2F4
TPK1
ELMO3
GOLGA5
CLDN19
PDXK
CALHM6
SLC35B4
SEC11A
WDR61
AGGF1
ACSL3
TMEM186
PMM2
GOSR1
DENND4B
TCTEX1D1
PIGU
PIKFYVE
DPYSL2
NAIP
CCDC102A
ADGRG5
STAU1
FAM120B
SLC24A1
PLCXD2
TAF11
ANKS1A
PDPR
FCGR2A
CSF2RB
RPL27A
SCRN2
LRRC46
OSBPL7
C1orf74
TATDN1
NDUFB9
PHACTR4
RALB
CCNL1
FBXO46
CEP350
MEIOSIN
THAP12
GVQW3
UCK1
ZNF780A
SNX3
GSPT1
ZNF56
ZNF142
BCS1L
LILRA3
ACVRL1
GPR183
OPA1
ZNF337
IBA57
PIGBOS1
PIGB
PA2G4
TERF2
IPO8
THOC3
GALK2
NFX1
COPS2
PRKAB1
SNRPC
CAPG
XRN2
TOR4A
WWP2
NOB1
NME7
BLZF1
SPDYE6
LOC100289561
TLE1
CES1
ZNF331
FCGRT
SRGAP2B
SRGAP2C
A2M
SPDYE17
FAM227B
DTWD1
TBPL1
FITM2
STARD6
C18orf54
RPS6KA1
THOC5
CSRP1
ARHGAP25
TAF12
CLPP
PACC1
RPL27
IFI35
SLC22A16
CAMK2N1
GTPBP10
NR1D1
KBTBD7
TMED10
SRSF4
MTMR14
KLF2
FASLG
BRIX1
ITGAL
CD99
CHST13
PHB
UBL7
DESI2
RAD50
ATP5PO
UAP1L1
PICALM
DNAJC16
CASP9
ANKRD39
MAN1B1
AP1B1
PRKCD
S100A2
PLEC
DOCK10
PLEKHO1
SEMA4C
MRPL17
HDDC2
WIPF2
PHC2
RPL37A
YKT6
BRPF3
CARD19
HK3
SYMPK
FOXA3
HSPA13
KATNBL1
PBK
OR8B12
GET4
LMNA
CFAP298-TCP10L
CFAP298
IRAK1BP1
SUCNR1
LILRA2
PGBD4
EMC7
JOSD2
ASPDH
RANBP3
TPM3
NOTCH1
NOL6
INTS1
UBR1
ELOF1
C22orf34
CIAO3
EML6
TMEM39B
ZNF668
ZNF646
DYNC2H1
ADAMTSL4
TSN
TOR1AIP2
TOR1AIP1
TECPR1
CCDC149
SLC39A1
CREB3L4
CRTC2
DBI
C2orf76
NAPG
RPS6KA2
NLRP3
PPCDC
DAP
GNAI2
ATP6V1B2
MED10
SLC18A1
MBD1
CXXC1
LAMTOR5
TAF13
LTBP2
RAB1A
HUS1
RRM1
NUP58
CCDC30
ZMYND12
PPCS
TBC1D14
TRNP1
FLVCR2
AHCTF1
SLC31A1
FKBP15
GLI4
SSNA1
ANAPC2
TRIM41
TLN1
CREB3
WDFY2
SPG11
MRFAP1
NCSTN
COPA
ORMDL3
GSDMB
LYPLAL1
UNC45B
NLE1
C1orf54
TOMM6
PRICKLE4
FRS3
APH1A
GUK1
GJC2
COPB1
ZNF697
OAS2
OCSTAMP
CALR3
C19orf44
TMEM39A
POGLUT1
VPS26C
NR3C1
NUP133
RNF181
ANXA2R
VAMP5
SV2A
SUPT5H
RPS16
SF3A3
BOLA1
SBNO2
RGPD1
RGPD2
SLC37A4
ADORA1
DAZAP2
TBC1D23
PUM1
GOPC
ADAM10
NFAM1
KCTD5
EMP3
CCDC114
ADSS2
CATSPERE
CASP8AP2
MDN1
SF3B5
RNF14
ACP3
DEFA3
CCL22
TOX2
TMX1
TUBA8
GTF2B
MEF2C
SLCO2B1
CD48
IGSF10
RPIA
ZW10
CLDN25
BOD1L1
GTF2H2C_2
GTF2H2C
ZFP64
SIGLEC6
CEACAM4
ATG7
ERMARD
PES1
ZCWPW2
AZI2
SDHC
MPZ
MTFR1
TCN2
ZNF614
PPME1
C2CD3
KIAA0513
RD3L
MRPS35
RPL5
SEMA4B
IFI16
MLKL
SPDYE12P
VCPKMT
C1orf198
PARVB
NKAIN1
RPL29
LMBR1
PPP2CB
SMIM22
ROGDI
BID
CTNNBIP1
IL1RN
ZNF513
SNX17
EIF2B4
OBI1
MAPKAPK2
BOD1
TRAPPC4
RPS25
ADAM17
CERS2
ANXA9
PRRT3
CNOT1
RHEX
SEC14L1
TRMT11
YIF1B
KCNK6
SYNE3
CPVL
CHN2
CTU1
MRPL55
MTMR6
ADAP1
RSL24D1
LAPTM5
SART1
ZWILCH
SNAPC5
RPL4
SH2B1
TUFM
PUM3
SYNGAP1
CUTA
PHF1
ETNK1
GNPAT
C1orf131
SLC1A5
DNAH14
IL6R
GIMAP8
COPS8
MED23
XRRA1
SPCS2
SRP9
SKP2
LMBRD2
CHMP7
NPIPB15
CSNK1A1
NECTIN4
C5AR2
FIGNL2
CTDP1
DEXI
CLEC16A
SRPRA
DECR1
CTNNB1
RPL36
MICOS13
HSD11B1L
SLC35F6
RPL22
RNF207
NUDCD1
SNAP47
JMJD4
MED4
ZNF350
GZF1
ABCA3
HCRTR2
C1orf100
CCDC146
DHDDS
KIF15
KIAA1143
LAMTOR1
OCIAD1
ZNF221
CHMP5
BAG1
LCP1
RAB44
ZC3H6
ZNF175
RPS20
LTN1
UBE2V1
SYT8
TNNI2
USP15
DCPS
MRPL44
RPL11
TRIM37
EMC8
COX4I1
CCL4L2
NKIRAS1
RPL15
DOK3
DDX41
ZBTB6
RC3H2
TRIP11
EEF1AKNMT
MMP24OS
MMP24-AS1-EDEM2
EIF6
RARA
FAM83C
BIN2
HSPA6
RASA3
RIC8B
MEN1
MAP4K2
RNF216
HIGD2B
BBS4
GTF2E2
STON2
VIRMA
PNPLA6
GGPS1
ARID4B
WNT10A
LRRC29
NDUFC1
NAA15
KIAA1586
ZNF12
RNF157
ZNF318
SYK
CASS4
KCNIP1
TRIAP1
COX6A1
ARHGEF3
GRK6
ABCD3
CTTN
EFHC1