ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX10131663 | Bronchial tracheal epithelial cells
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◢ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◢ SRX535453: A-375

◢ SRX535454: A-375

◢ SRX5501657: A-375

◢ SRX5501659: A-375

◢ SRX5501661: A-375

◢ SRX10131662: Bronchial tracheal epithelial cells

◣ SRX10131663: Bronchial tracheal epithelial cells

◢ SRX20436771: DLD-1

◢ SRX20436779: DLD-1

◢ SRX22001291: DLD-1

◢ SRX22001292: DLD-1

◢ SRX22001293: DLD-1

◢ SRX10715331: HCB1

◢ SRX10715344: HCB1

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◢ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX20230567: Ishikawa

◢ SRX20230568: Ishikawa

◢ SRX20230569: Ishikawa

◢ SRX20230570: Ishikawa

◢ SRX20230571: Ishikawa

◢ SRX20230572: Ishikawa

◢ SRX20230573: Ishikawa

◢ SRX20230574: Ishikawa

◢ SRX10144542: Kasumi-1

◢ SRX10144543: Kasumi-1

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX7366779: MCF-7

◢ SRX7366780: MCF-7

◢ SRX7366781: MCF-7

◢ SRX7366782: MCF-7

◢ SRX7366783: MCF-7

◢ SRX7366784: MCF-7

◢ SRX244177: MM.1S

◢ SRX244180: MM.1S

◢ SRX327758: MM.1S

◢ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◢ SRX1637467: MOLT-4

◢ SRX1637469: MOLT-4

◢ SRX1637470: MOLT-4

◢ SRX24723215: MRC-5

◢ SRX24723217: MRC-5

◢ SRX24723219: MRC-5

◢ SRX24723221: MRC-5

◢ SRX2375362: MV-4-11

◢ SRX2375366: MV-4-11

◢ SRX14127531: OCI-AML3

◢ SRX14127532: OCI-AML3

◢ SRX14127543: OCI-AML3

◢ SRX14127544: OCI-AML3

◢ SRX18455086: OCI-AML3

◢ SRX18455087: OCI-AML3

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◢ SRX4023329: T-47D

◢ SRX4023330: T-47D

◢ SRX728779: THP-1

◢ SRX728780: THP-1

◢ SRX9730732: THP-1

◢ SRX9730733: THP-1

◢ SRX9730734: THP-1

◢ SRX9730735: THP-1

◢ CDK9: STRING

INO80D
ZFX
HNRNPR
TCERG1
HEXIM2
FBXW4
ARL4D
ASXL1
MAMDC2
MTA3
KMT5B
SNX16
DDX17
IER3
FLOT1
HNRNPUL1
MTRNR2L8
RNF220
MT2A
EIF4G1
HMGB1
GTF2I
NFYC
ADNP
ZNF280D
EGR1
TRIM52
WDR74
STX5
TXNDC15
ZNF532
FAM169A
NAE1
SERPINE1
DUX4
GTF2IRD2
GTF2IRD2B
NSMAF
ZC3H6
SF3B3
COG4
ATF1
COMMD10
SSRP1
P2RX3
PAIP1
BTF3
PPP2R2A
FBXO4
ACTB
RAD50
HNRNPA3
KDM3B
RPS23
ATP6AP1L
SCAF8
RPL37A
DDIT4
ZNF282
MANF
RBM15B
ATXN10
ZMYND11
ERAP1
SREK1
SMAD5
ZC3H11A
ZBED6
TBL1XR1
LEMD2
ZBTB38
SRCAP
LOC730183
EIF2D
NEK9
UBE2L3
BRWD1
DARS1
DDAH1
CCN1
ZNF507
ZNF444
DYNC2I1
PRCC
RBM26
PUM2
ACVR2B
MLLT11
GABPB2
ZNF22
STRN4
FKRP
MRPL28
YWHAE
R3HDM2
INHBC
BPTF
ZNF518A
LRRC37A3
NSD1
SDHAF2
CPSF7
ELAC1
LHX9
C1orf53
GPS2
EIF5A
MRPL23
PRRC2A
AIF1
ZNF148
RHBDD3
EWSR1
SELENOT
ZFP62
VPS54
SOCS6
F3
RPL13
PCBP1
DUS1L
NAA38
SEPHS1
CHD3
C4orf36
RANGAP1
ZC3H7B
DEK
TGFBRAP1
C2orf49
EIF4B
ZNF768
ZNF747
RMI1
HNRNPK
TBCA
FAIM
SNRPB
THBS4
MTX3
ASB1
ARPP19
RCOR3
FBXO38
PPIA
TFDP1
POGZ
ANKRD40
ZSCAN12
KDM5C
CSNK1D
COMT
TXNRD2
RDH14
ZC3H4
RNF214
PCSK7
RIN3
SLC24A1
ACYP2
URGCP
URGCP-MRPS24
SRRM2
TDRD3
RNF135
EIF4G3
ANXA2
KLHDC8B
CCDC71
TMEM17
MDM4
ZNF839
GOLM2
RAN
RPS5
RNF225
MTRNR2L2
MSH3
DHFR
NNT
TOP2B
PGGT1B
MARCHF6
GAPDH
ANP32B
SRSF6
ZMYM4
RPS19
MIER3
ZFP64
REV1
KIF5C
PAFAH1B2
PTPN9
TEPSIN
NDUFAF8
CHD1
DUSP16
SOX6
C11orf58
GTF3C6
SMARCE1
DIS3L2
SLC30A5
ZNF746
LPGAT1
NCOA6
TET3
SRSF4
CKS2
SECISBP2
HNRNPF
RPS4X
SPIN1
PMF1-BGLAP
PMF1
STK24
IDNK
SFXN1
ZNF143
RPS14
RNASEH2B
HDDC2
SENP6
CCDC102A
ADGRG5
GSAP
CSNK1E
NFKB1
SETD2
CDC16
PARP8
EIF3A
RAD23B
SUSD1
ACBD6
CALR
RAD23A
ZNF76
FOXK2
CLPX
KIAA1191
ARL10
RPS7
CTPS1
NLRX1
UNC50
COA5
NAA25
AVEN
LRRK1
DNAJC11
ZNF207
C17orf75
KCTD18
BEND3
STAG1
OCIAD1
NFKBIA
USP21
UFC1
CCN2
UQCRH
LRRC41
HNRNPAB
REPIN1
ZNF775
GMEB1
VWA8
ZCCHC3
C20orf96
RBM39
SLC9B2
ARPIN-AP3S2
ARPIN
NFIC
ZNF131
EEF1A1
SEPTIN8
EEF1AKMT4-ECE2
EEF1AKMT4
ALG3
PRTFDC1
PTBP1
SDF4
B3GALT6
ZNF292
TASOR
PRRC2B
MYH9
PBX2
GPSM3
AGER
JMJD1C
ZNF101
ATP13A1
REEP3
ZNF562
MSL1
ERMARD
KAT6A
ZNF777
AGPAT3
HDGFL3
KMT2D
RHEBL1
MATR3
SLTM
DOK2
XPO7
C7orf26
ZNF236
UIMC1
IMPACT
HMGN2
RCC2
RPTOR
H6PD
CNIH1
GABPA
ATP5PF
SLC7A1
RPL5
ODC1
UBE2E3
BRD7
TRMT2A
RANBP1
TNPO1
BCL7B
SMNDC1
S100A13
S100A1
CHTOP
NUCKS1
MACROH2A1
NME1
TUBGCP3
NUFIP2
ZFAT
CCNJ
VDAC1
NUAK1
DNAJA4
C5orf51
GPD2
ZC3HAV1L
TLK2
CD68
EIF4A1
LOC100996842
GBA
MPDU1
GMEB2
UBE2J2
SCNN1D
NSMCE4A
CPLANE1
ZNF274
CANX
DCPS
CIPC
SQSTM1
RACK1
TM9SF4
UBAP2L
C1orf43
TEDDM1
GLUL
ZNF428
SRRM5
RBM33
ZNF346
YBEY
MCM3AP
ARHGDIA
ZNF407
ATIC
HDGF
MRPL24
DDX50
DYNLL1
RPS6
SRSF9
GIGYF2
MCCC2
KRCC1
USP24
BAZ1B
ZKSCAN7
KANSL1
INO80
LYRM7
HINT1
TMEM106B
YARS1
S100PBP
AKAP10
DCAF8
PCIF1
C1QBP
ZFR
GPX7
MPDZ
RPL29
NRF1
FABP6
MAGI2
ZNF787
DIS3L
SYNGR2
PTBP2
SCLY
UPF1
STS
PUDP
SIL1
WDR43
METTL15
KIF18A
ZNF354B
QSER1
NAB1
HMGCS1
HECTD1
MAML1
PPP3CC
RAC1
EAPP
LARP1B
AMPD3
ABCB10
KIAA1614
RPS3
H4C12
H4C11
H2BC15
H2AC15
PCNP
RDX
TENT2
NPEPL1
RCC1L
ECPAS
IDI1
WDR37
SUMO2
ZC3H7A
KBTBD3
AASDHPPT
PHF13
SUCLG2
THAP3
MRPL48
SMC3
SLC25A46
SFT2D3
KDF1
CHURC1-FNTB
CHURC1
LOC107984974
ATF4
TARDBP
RGPD1
RGPD2
MTMR2
MARCHF7
AIG1
NFYB
EZH2
EIF4H
ANKRD9
KDM2A
DYRK1A
VPS16
PCED1A
IRF2
MTMR10
DENND6B
RPL3
MRPS2
C9orf116
NEMP2
RUFY1
C1RL
FKBP8
SRSF1
ELOB
PRSS33
ATP5F1E
PAN3
GALR3
MCL1
NAPEPLD
TMEM62
CHADL
KPNB1
CCDC85B
RAB11FIP2
FOSL1
HUS1
RPS15
SOCS5
FBXO7
CUL1
SCMH1
PNMA8B
ZBTB17
MLLT10
SKIDA1
SUMO3
LTN1
CNBP
CTSW
RAD21
AGMAT
KMT2B
RNF169
NDRG1
PHF11
TXNRD3
DCP1B
FAN1
CREBZF
ATXN7L3B
CTCF
TLE5
RPS3A
BCL2L13
ATP6V1E1
EPC2
RPSA
CDKN2C
TACO1
RPL19
CACNB1
PHIP
ZNF789
ATP5MF-PTCD1
ATP5MF
RAD54L2
TUBGCP5
PHC3
MAN2A2
CLCN7
SNX19
USP37
CNOT9
MANSC4
KLHL42
FAM160B1
UBE2Q1
CHRNB2
HNRNPL
PABPN1
PHF3
MRPL19
UCK2
ERBIN
MYBPC3
TMEM268
ZNF764
C5orf24
GATAD1
CYB561
DCTD
FAM160B2
PCBP2
HDAC2
KEAP1
SNRNP35
HENMT1
BRD4
B3GNT5
POU6F1
NFKBIL1
DDX39B
ATP6V1G2
EIF4E
CERS2
ANXA9
TMEM94
MICOS10-NBL1
MICOS10
OBI1
NDFIP1
REXO4
ADAMTS13
ILF3
ZNF326
CTF1
BCL7C
ACSF3
ZNF341
TAF4
ZBTB47
MTERF4
NSFL1C
BMS1
PPP4R3A
LTV1
ZFP2
SIPA1L1
SMIM12
SMIM10L1
PRH1-TAS2R14
PRH1
RPL21
C19orf12
ZNF398
EIF3B
SREK1IP1
CWC27
SMAD4
BRIX1
RPL35A
IQCG
LMLN
MFSD14A
TPT1
USP40
BOD1
ZNF358
MCOLN1
G3BP1
SKP1
ZBTB6
RC3H2
TRIM44
IAH1
IMMP2L
MORF4L1
RNF6
REV3L
ZKSCAN2
COL23A1
PRADC1
CCT7
PHC2
DHX15
WDR82
GLYCTK
RPL32
MAP3K20
GABPB1
NACA
CRADD
PRDM2
ITSN2
NIPSNAP2
C9orf64
PRR25
GNG13
MPPE1
ITGB1
TLK1
TMCC1
CASD1
RPL12
LRSAM1
U2AF1L5
U2AF1
ATN1
MCMBP
SLC20A1
SLC22A5
UBC
VPS4A
MAP2K2
FAXC
VAPA
JPT2
TBC1D5
MSRB2
OBSL1
INHA
KPNA1
P3H4
FKBP10
SAR1B
GADD45B
PCBD2
DCAF10
COX7C
RPL37
CARD6
ATE1
RPL9
LIAS
PIP4K2B
PEX7
NCKAP1
HSPA9
ING5
ZNF70
VPREB3
P2RY11
DPY19L4
PPAN-P2RY11
PPAN
ANGPTL6
ACTRT3
MYNN
DAZAP1
GAMT
DRAP1
C11orf68
MTHFD2L
DDX6
PPP6R2
MRPL21
IGHMBP2
PFKM
SENP1
RPL35
ARPC5L
POLR2M
WDR38
KMT2A
DPYSL2
MRPL39
FAM228B
STOML2
PIGO
FAM214B
SNRPD1
MAN2C1
HSPA8
RPP38
ACBD7
RITA1
DDX54
KLHL9
PFN4
ARRDC3
BFSP1
TAPT1
CLIP4
TCF7L2
CTSZ
SRSF11
ZNF770
MAN1A2
PIM3
EEF1AKMT1
SGCE
PEG10
ZNF384
DEDD
TTC17
HMGA1
DHRS12
BRAF
MTA1
MACROH2A2
TMBIM4
KCMF1
RFX8
CCDC200
RPL17-C18orf32
RPL17
C18orf32
RPS15A
ETAA1
PRKAA1
ZNF619
NOXO1
ZNF513
SNX17
EIF2B4
JAGN1
GFER
SYNGR3
TTC3
PIGP
RCN1
SETD7
TBRG4
SNX5
MGME1
RPL11
XBP1
INTS2
BEX3
ZNF518B
ZZEF1
CYB5D2
ANXA4
DENND4B
CENPV
ODF3L2
MADCAM1
SDC4
USP30
RFX3
GTPBP4
NFKBIZ
PTPN21
TEX22
FBXL17
BACH1
HOXB6
HOXB7
HOXB8
VAMP2
GDI2
EXOSC6
FBXL5
TUT4
D2HGDH
EEF2
MYH7B
GSS
CPSF6
SURF4
CTSO
KATNAL2
PIAS2
PPRC1
FBXO28
RNPS1
SSBP2
RXRA
CCNG1
EPM2A
ZNF496
FBXW11
TTI1
RPRD1B
OMA1
DAB1
SORBS3
TAF12
UCK1
PICK1
LIG3
HHIPL1
BCL2
EGFR
COMMD1
CCT4
SNRNP70
PLEKHM3
CKAP2
VPS36
PLEKHA1
USP47
COX16
ZNF629
SUMF1
TTYH2
RPL38
HNRNPU
DYNC2I2
RBM12
CPNE1
CKLF-CMTM1
CKLF
TUSC1
TK2
NELFCD
TAF15
RPL27A
DHX30
PPP6R3
AFG3L2
CLK1
IRF2BP2
COIL
SMAD1
THUMPD3
MMAA
SP3
EP300
RYK
ARSB
MGAT4B
ABTB1
MRPL52
MMP14
DRAM1
FJX1
KRT17
KRT16
TMEM11
TMED9
B4GALT7
CCDC97
HNRNPD
PET117
KAT14
WDFY3
DERA
EBAG9
EMB
ARHGEF7
GEMIN7
ZNF296
NBPF15
CSNK1G3
ZNF621
CHMP6
CBX8
TMEM88B
PGAP4
ANKRD65
DDX1
LZTR1
LDAH
NSRP1
MMADHC
LACC1
CCDC122
COQ9
CIAPIN1
PPOX
FAM98B
CAPZA2
DDX19B
AARS1
SCP2
PHF19
EPHA2
ZNF785
GGACT
ECHDC2
UNC119B
GIGYF1
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
RAB1B
UQCRFS1
IQANK1
FAM83H
GABARAP
TUBA1B
RPS8
ELP5
CTDNEP1
PDXDC1
MKLN1
PPIP5K2
SMARCA4
UHMK1
XPC
LSM3
DMTF1
PSMD14
NUDT4B
NUDT4
AGO4
GSTA4
TIAL1
ADO
SETD5
SPOP
MTMR1
ZGPAT
ARFRP1
MTRR
FASTKD3
CKAP5
SF1
NHLRC2
DCLRE1A
AGK
ZFP91
LPXN
ANP32A
SMARCC1
HIF1A
LMO4
DENND2D
DNMT3A
ZNF862
ZNF302
SLC35A3
PRKAR1B
CIZ1
ANP32E
IREB2
TCTN1
RNF44
NINJ2
CDHR2
DOCK7
ALKBH3
MAPK11
POLR3E
MAP2K1
ZNF717
PFDN4
TMEM42
NFAT5
YEATS2
SLC35D1
PRDM5
WSB2
ARIH2