ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX367328 | 293
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◣ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◢ SRX535453: A-375

◢ SRX535454: A-375

◢ SRX5501657: A-375

◢ SRX5501659: A-375

◢ SRX5501661: A-375

◢ SRX10131662: Bronchial tracheal epithelial cells

◢ SRX10131663: Bronchial tracheal epithelial cells

◢ SRX20436771: DLD-1

◢ SRX20436779: DLD-1

◢ SRX22001291: DLD-1

◢ SRX22001292: DLD-1

◢ SRX22001293: DLD-1

◢ SRX10715331: HCB1

◢ SRX10715344: HCB1

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◢ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX20230567: Ishikawa

◢ SRX20230568: Ishikawa

◢ SRX20230569: Ishikawa

◢ SRX20230570: Ishikawa

◢ SRX20230571: Ishikawa

◢ SRX20230572: Ishikawa

◢ SRX20230573: Ishikawa

◢ SRX20230574: Ishikawa

◢ SRX10144542: Kasumi-1

◢ SRX10144543: Kasumi-1

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX7366779: MCF-7

◢ SRX7366780: MCF-7

◢ SRX7366781: MCF-7

◢ SRX7366782: MCF-7

◢ SRX7366783: MCF-7

◢ SRX7366784: MCF-7

◢ SRX244177: MM.1S

◢ SRX244180: MM.1S

◢ SRX327758: MM.1S

◢ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◢ SRX1637467: MOLT-4

◢ SRX1637469: MOLT-4

◢ SRX1637470: MOLT-4

◢ SRX24723215: MRC-5

◢ SRX24723217: MRC-5

◢ SRX24723219: MRC-5

◢ SRX24723221: MRC-5

◢ SRX2375362: MV-4-11

◢ SRX2375366: MV-4-11

◢ SRX14127531: OCI-AML3

◢ SRX14127532: OCI-AML3

◢ SRX14127543: OCI-AML3

◢ SRX14127544: OCI-AML3

◢ SRX18455086: OCI-AML3

◢ SRX18455087: OCI-AML3

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◢ SRX4023329: T-47D

◢ SRX4023330: T-47D

◢ SRX728779: THP-1

◢ SRX728780: THP-1

◢ SRX9730732: THP-1

◢ SRX9730733: THP-1

◢ SRX9730734: THP-1

◢ SRX9730735: THP-1

◢ CDK9: STRING

WDR74
STX5
EAPP
SRSF7
HEXIM1
JPT1
MFSD11
SRSF2
TAF12
ZBTB45
TRIM28
JUN
ZBTB4
SLC35G6
POLR2A
RPL5
PPM1D
FAM53C
CDC25C
H4C14
H3C15
H3C14
H2AC19
H2AC18
RPL3
C15orf39
RHOB
NGRN
C12orf65
ID4
TUBA1B
NPR1
ILF2
HNRNPAB
FUS
HSPA1B
CIRBP
FAM174C
THADA
BCAR3
EIF4G2
TMEM167B
SFPQ
POLG
PIK3R3
CALR
RAD23A
FARSA
EIF4A2
KLF6
ZC3H10
RPL41
PPP4C
ALDOA
UNK
H3-3B
RSPH3
H4C15
CDH11
RCC1
TAF4
H1-10
PRDX1
RPLP1
EEF1A1
ATF4
SND1
COQ8A
TRA2B
DUSP1
JUND
IQCN
SRSF6
HNRNPH1
POLG2
DDX5
CEP95
MDM4
SLC38A2
TPI1
SPSB2
GTF2H5
SETD5
INTS6
TRAF7
RAB26
RPS14
KCTD13
SRCAP
LOC730183
YWHAE
ZBTB37
PARP16
SOD1
GNAI3
GPR61
TMEM242
RPS11
RPL13A
SESN2
FAM219B
ECI1
GTF3C6
PABPC4
SIRT4
INTS2
WDR1
HNRNPA2B1
CBX3
COQ2
NCOA7
GBA
RS1
PPEF1
KNTC1
UBB
H2BU1
H2AW
EIF5
NUP133
FBXL3
SLC9A1
BTG3
ACTB
UBE2S
CD68
EIF4A1
VPS72
PIP5K1A
CITED2
SEPHS2
NASP
RPS8
RBM39
NKIRAS1
RPL15
TBL3
RPS2
RNF151
MTRNR2L1
NDUFB10
RPL3L
CZIB
SMC1A
RIBC1
AAAS
SNRNP48
E2F3
DLG2
RPS4X
ZNF143
SRSF5
ZBED8
NOL11
EEF2
PRRC2B
RPL11
MYLIP
STMN1
SLFN11
TFRC
OAZ1
DNTTIP2
FSCN1
EIF1AX
NDUFV3
SMOC1
BAMBI
IDH2
NOTCH2NLC
NOTCH2
CBX5
HNRNPA1
SPECC1L
NSF
LTN1
NOP14
GRK4
DPP9
HSP90AA1
EFCAB2
LTA4H
RBM26
LOC105378979
TP53BP2
RRP1B
HSF2BP
SRSF1
PPIA
NFYC
HMGN2
SCAMP2
POLE4
MAT2A
RPL6
PTPN11
CALM2
C19orf48
S100A13
S100A1
CHTOP
HSDL2
DDX17
PPP1R10
MRPS18B
SLC1A5
ATAT1
TOB1
MTMR11
SF3B4
RBMX
EIF1
LUC7L2
YIPF6
FMC1-LUC7L2
FMC1
PSRC1
RBM12
CPNE1
NUP214
FAM166A
STPG3
TUBB4B
TSPAN3
POLR2J3
LUC7L
FAM234A
TBCE
MTRNR2L2
MSH3
DHFR
NABP1
TMEM107
MAPT
SOD2
WTAP
LIN9
FAM200B
PSMC6
RPL31
ALDH3A2
MTHFD2
BTBD10
ABCA5
ARIH1
KIF5B
DEGS1
TIA1
PCYOX1
RNF220
XBP1
MTHFS
MKNK2
B4GALT3
GADD45A
DCPS
TUBD1
RPS6KB1
MCMBP
C16orf72
SLC27A3
MESD
LAP3
ATP5PO
AFF1
RAB11A
RPL19
CACNB1
CHRNA5
DCAF8
NCL
WRAP53
TP53
MORC3
ZDHHC4
SIPA1L1
UBC
TAF1D
C11orf54
TM2D3
PKM
DGCR8
RPP25L
DCTN3
ALOXE3
HES7
EIF4A3
TAF15
HINT3
TAOK1
SNX3
HSPA5
STAT1
SRRM2
NOTCH2NLB
NOTCH2NLA
YBX1
FZD8
HEXIM2
KLHL11
TGOLN2
BBC3
ARPC1A
H4C2
H4C1
H3C1
H1-1
ZNFX1
MYBL2
CHEK1
CDK1
UGCG
MANSC1
BORCS5
MCL1
DYNLL2
BLOC1S5
SRSF3
MSH6
SDHAF4
ID2
RNPS1
UGP2
H2AX
DPAGT1
HMBS
THOC3
SACM1L
TRAF4
DLX1
CALM1
ZNF771
ULBP1
VAMP1
CENPH
ESR2
PHAX
ALDH7A1
YWHAG
RBM25
C6orf62
RNF122
MTF2
IER5
FAM71E1
EMC10
H2AZ1
DNAJB14
DDX3X
HERPUD1
NDUFAF3
IMPDH2
DALRD3
GGPS1
ARID4B
LSM14A
ACTRT3
MYNN
GGA2
ADPGK
AGL
ZNF280C
PHF10
USP10
OAZ3
ZBTB11
RPL24
RCBTB2
KLC1
C1QTNF6
SLC20A1
EXOSC9
HDAC1
DHRS12
IFIT3
ACAD9
RPS15
RPL37A
KIF2C
RBBP6
WBP11
C12orf60
SMYD4
RPA1
KLHL15
MTRNR2L8
ASCC1
ANAPC16
DHX9
CEBPA
GDPD3
MAPK3
POLR3E
ATF3
ACTG1
MESP1
MAP3K21
NFKBIL1
DDX39B
ATP6V1G2
IL4I1
NUP62
ATF5
MICU2
MAD1L1
INTS5
GANAB
NUDT1
MRM2
HMGB2
CFAP20DC
GDI2
LRCH3
USP1
TSC22D2
RNF146
UCHL1
MSX1
UFL1
ZBED4
ATP1A1
PSMA3
PPY
RPSA
RPL10A
RGPD1
RGPD2
AMZ2
NXF1
GORASP2
SP1
CDK12
RPL13
TXNDC15
TEDDM1
GLUL
HSPA1L
HSPA1A
LSM2
HNRNPDL
ENOPH1
SOAT1
CLSPN
RPL29
DYNLL1
LENG8
SRSF9
SLC22A4
HDHD3
ACSL3
PMPCA
ENTR1
PCIF1
TTLL12
EZR
DMWD
SLIT2
ZWILCH
SNAPC5
RPL4
H2AZ2
PCBP1
NCOA5
CBY3
PTPN6
C12orf57
BUB3
HMX2
NEK4
ITIH1
TARS3
WDR35
HACD3
ADAM17
BRD2
ZMYM1
MTMR2
YWHAQ
HNRNPR
MTF1
BPHL
EPC2
ZSWIM7
TTC19
FTL
FDXR
PRADC1
CCT7
LEFTY1
TMEM63A
RPS19
UMPS
THAP9
SEC31A
PHGDH
CSNK1E
FBF1
RPL12
LRSAM1
COMMD4
FTH1
EXOC7
TRA2A
DNAJC25-GNG10
DNAJC25
UBA2
PUM1
DDIT4
KANSL2
SLC5A3
MRPS6
TLE3
PRIMPOL
CASP3
HINFP
ZBTB25
ZBTB1
TSNAX
RPL22L1
BCLAF1
ZNF830
CCT6B
PRMT2
DNAH14
TEX30
MAN2C1
ERMARD
ACTN4
MRPL17
DPY30
RBBP7
FAM89A
TUBGCP3
DDX19B
AARS1
TRIM7
RXFP4
KHDC4
PMF1-BGLAP
PMF1
TMED4
DDX56
MFSD14A
ZCCHC17
SNRNP40
SAT1
LRIF1
SLC7A5
RAP1GDS1
ATP2A2
GNA13
ISL2
CHIC2
RTL10
GNB1L
GLS
FASN
ATXN2L
SLC25A19
MPZL1
SLC35E2A
ARF6
DNMT1
PAN2
IL23A
RPAP2
GLMN
MSRB2
ING3
BOD1L1
RPLP0
GCN1
PUM2
COMMD6
TTC32
PIGF
CRIPT
CKB
BTG1
TRMT61A
SOX4
PPP6R2
MAEA
PELP1
ARRB2
MYL6B
MYL6
SPTAN1
COX20
ANKRD13C
MAGI3
INTS7
DTL
CANT1
HSP90B1
HIRIP3
SLC26A2
C22orf39
ZNF627
SLC16A1
TUSC1
NDEL1
AKAP7
CSRNP2
LRRC37A3
CDC20
ELOVL1
REEP5
THUMPD2
ADM
BORCS6
PRKACB
MCM7
AP4M1
MANF
RBM15B
NOP56
YEATS4
SZT2
MED8
RBMXL1
KYAT3
SREBF1
MRPS21
ZYG11B
SLC33A1
GPATCH3
TBC1D22A
RBM34
SIL1
ZBTB2
LAG3
PHF14
PTMS
HOXD12
EVX2
HOXD13
NEFL
CANX
TOMM20
MATR3
HES1
CLN5
SETD9
ARL6IP1
CD164
STT3B
NPIPA3
NPIPA2
YWHAH
PLA2G10
C22orf24
CPT2
HFM1
ILKAP
MOB4
AKR1A1
RPS15A
PIP4K2B
PI4K2B
MIF
NCKIPSD
NAV2
UGT1A4
UGT1A3
RPS3
RPS7
HSPA8
CSE1L
MAMDC2
ATG16L2
ADAMTS1
IFNAR1
TEX14
RAD51C
TRIM13
DHX15
MBOAT2
PRPSAP2
DNAJC27
SURF2
SURF1
RPL7A
MED22
EPM2A
SMURF2
PABPC1
OXLD1
CCDC137
SLC25A3
SUMF2
CSDE1
RPL9
LIAS
C21orf91
FAM117B
C15orf61
SCAF4
CKS2
SECISBP2
SRP68
ZACN
GALR2
DNAJB1
RBM8A
PEX11B
PSMB3
PCGF2
HACL1
BTD
PRDX3
HSPA6
P2RX4
SLC3A2
TAOK2
TM9SF4
NUP188
DOLK
XPO1
ARL1
IP6K1
GUSB
PPP1R8
ZNF3
COPS6
GAPDH
SLC25A4
LUC7L3
SLC39A10
BMP2K
ZNF131
POLE3
C9orf43
ALAD
EIF3L
ANKRD54
SQSTM1
SGTA
THOP1
RNF149
NSRP1
RASSF1
CYCS
ZMYND10
TUSC2
POLR3B
NTMT1
C9orf50
PDSS2
MOSPD2
FANCB
SNRNP70
TRIM41
TSGA10
SEC14L1
NSUN4
MRPS14
TMEM116
ERP29
MCM5
OSTM1
KMT5B
DBNDD2
TRIM65
MRPL38
MPI
EIF3A
TMSB10
MACROH2A1
ZC3H4
FOXO3
H4-16
H2AJ
USP25
ING5
RPP38
ACBD7
TOB2
LZTR1
TOE1
MUTYH
H4C3
H1-6
MAP3K3
NT5DC1
HEATR1
OLA1
DIP2A
NMT1
DCAKD
FAM133B
KIF5C
SRSF4
EXOSC10
PRPF38B
ENO1
ARL15
PCGF6
UCHL3
ANXA11
ZKSCAN2
CDKN2AIPNL
RANBP2
UBAP2L
C1orf43
PMPCB
TMEM39B
GTF2A1
VPS37B
UHRF1BP1L
CCDC136
OPN1SW
ZMYND15
MED11
CXCL16
PRPF4
CDC26
ZNF589
MVK
SELENOW
MDM2
CNOT11
EZH2
SYP
ACACA
TADA2A
SLC16A10
BCL2L13
ATP6V1E1
ADIPOR2
RPL23
MRGBP
HYLS1
BTBD1
THNSL1
TBC1D4
OGFR
NBPF1
USP39
C2orf68
ATXN7L2
CYB561D1
TMEM150A
HNRNPU
MYO1G
PRRC2C
SLC25A11
RNF167
PFN1
NGB
GP1BA
ERO1B
PPP6R1
URB2
TAF5L
IREB2
BCAS4
H4C8
USP24
CD320
TMX1
SPRYD3
RBSN
ZNF839
RPS24
POLR3A
SMARCC1
H2BC21
H2AC21
H2AC20
CMTR1
CCDC200
MSTO1
NAXE
GPATCH4
ARL17B
USP38
TNFRSF10B
PTBP1
C7orf25
TMEM129
TACC3
SLBP
CLNS1A
SRRM1
ADI1
TMEM128
MRPL40
HIRA
MRFAP1L1
BLOC1S4
PSMG3
TCAIM
PYCR2
TPRA1
UBTD1
MMS19
RPF2
SMIM13
ATN1
HASPIN
ZDHHC14
PARN
BFAR
SERTAD2
MUC1
CCNL1
PSTK
POLR2J2
ZNF565
ZNF146
PUS7
RINT1
IMMT
STIL
MRPL35
UBE2Z
POLD2
COIL
BSG
SF3B1
GEMIN8
DDX6
TBC1D2B
STRAP
VIM
MRPS15
IPO7
C10orf143
ZNF326
PITRM1
TNRC6B
NPM1
PHF2
GEMIN4
PPP1R27
MCRIP1
ANKRD31
LYPLAL1
RBFOX2
FARP2
MRPS16
DNAJC9
PARK7
FBXW2
MEF2A
NARF
CYBC1
ZFAND5
HACD2
SCN11A
WDR48
MAP4K1
EIF3K
UBQLN2
ENAH
PSMA4
STARD7
SLTM
B2M
POU4F1
PFKL
LATS1
ZNF574
HNRNPD
GRIK5
CCZ1B
ANGEL1
OSCP1
ALG6
UPF1
PPP1R12C
MRPL39
POLR2E
GPX4
RERE
MLLT11
SELENOT
GABPB2
MYDGF
SDHC
MPZ
MAP2K2
DARS1
RPS13
RPL17-C18orf32
RPL17
C18orf32
LDHA
SLC25A36
CKAP2
VPS36
ING1
CARS2
HLCS
PCMT1
CSK
TXNRD3
USP48
WNK1