ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX20230571 | Ishikawa
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◢ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◢ SRX535453: A-375

◢ SRX535454: A-375

◢ SRX5501657: A-375

◢ SRX5501659: A-375

◢ SRX5501661: A-375

◢ SRX10131662: Bronchial tracheal epithelial cells

◢ SRX10131663: Bronchial tracheal epithelial cells

◢ SRX20436771: DLD-1

◢ SRX20436779: DLD-1

◢ SRX22001291: DLD-1

◢ SRX22001292: DLD-1

◢ SRX22001293: DLD-1

◢ SRX10715331: HCB1

◢ SRX10715344: HCB1

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◢ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX20230567: Ishikawa

◢ SRX20230568: Ishikawa

◢ SRX20230569: Ishikawa

◢ SRX20230570: Ishikawa

◣ SRX20230571: Ishikawa

◢ SRX20230572: Ishikawa

◢ SRX20230573: Ishikawa

◢ SRX20230574: Ishikawa

◢ SRX10144542: Kasumi-1

◢ SRX10144543: Kasumi-1

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX7366779: MCF-7

◢ SRX7366780: MCF-7

◢ SRX7366781: MCF-7

◢ SRX7366782: MCF-7

◢ SRX7366783: MCF-7

◢ SRX7366784: MCF-7

◢ SRX244177: MM.1S

◢ SRX244180: MM.1S

◢ SRX327758: MM.1S

◢ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◢ SRX1637467: MOLT-4

◢ SRX1637469: MOLT-4

◢ SRX1637470: MOLT-4

◢ SRX24723215: MRC-5

◢ SRX24723217: MRC-5

◢ SRX24723219: MRC-5

◢ SRX24723221: MRC-5

◢ SRX2375362: MV-4-11

◢ SRX2375366: MV-4-11

◢ SRX14127531: OCI-AML3

◢ SRX14127532: OCI-AML3

◢ SRX14127543: OCI-AML3

◢ SRX14127544: OCI-AML3

◢ SRX18455086: OCI-AML3

◢ SRX18455087: OCI-AML3

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◢ SRX4023329: T-47D

◢ SRX4023330: T-47D

◢ SRX728779: THP-1

◢ SRX728780: THP-1

◢ SRX9730732: THP-1

◢ SRX9730733: THP-1

◢ SRX9730734: THP-1

◢ SRX9730735: THP-1

◢ CDK9: STRING

MTF2
CTNNB1
CKS2
SECISBP2
CALM3
PPP5D1
VCP
FANCG
TSC1
GFI1B
ARRDC4
KDM4A
IP6K2
SOD2
WTAP
DDX23
CLTC
CYCS
LRP6
NXF1
GATB
PDCD4
CALM2
DOLPP1
ATAD2
LAMP1
SESN3
HEXA
NAGPA
CFAP20
CALM1
SCGB1C2
SCGB1C1
ODF3
PHIP
CNOT1
SAP30BP
RECQL5
MCU
KCTD9
CDCA2
CCDC77
KDM5A
KPNB1
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
ZC3H6
CYP51A1
KMT2D
RHEBL1
ZNF124
BRWD1
NOTCH2
TCF3
CHD2
ZKSCAN2
SENP2
LAT
SPNS1
TMEM199
SEBOX
POLDIP2
TOP2B
RPLP1
PPWD1
CENPK
ARNTL
WASHC2A
MXD4
CCNL1
TSPYL2
DYRK1B
ATG14
IPO11
DIMT1
RBM42
TYK2
CCDC88A
KMT5B
WASHC2C
HEXIM2
DDIT4
POLR2J3
TAF5
MSMO1
KDM4B
RBL1
PRKACA
PIK3IP1
NLK
RAB42
HSP90B1
MRM3
GLOD4
SPATC1L
TRMO
PBLD
HNRNPH3
ZFAND2A
SLC3A2
TBCCD1
DNAJB11
CCNI
TROAP
PIK3R3
DOHH
FZR1
PI4K2A
MORN4
CCNG2
HNRNPAB
TDRKH
TOMM22
B4GALNT3
NUP214
SLC9A1
DIP2A
ENDOV
GATAD2A
GABPB1
CHPF2
ABCF2-H2BE1
ABCF2
SPRED1
COQ7
IST1
VIRMA
TOM1L2
DRC3
MRTO4
EMC1
ARHGEF12
RCOR1
FOXJ3
PRDX1
ZNF518A
RCL1
UBE2D3
ERAL1
TRIAP1
COX6A1
RFX5
H2AX
DPAGT1
MRPS35
HMBS
FAM204A
GOT1
UBC
STX18
PINX1
OGT
AJUBA
PKM
FUS
HBS1L
TRIP4
PCLAF
EIF2D
OPA1
SPTLC1
SPATA25
NEURL2
CTSA
ZSWIM1
PAFAH2
TMEM41A
ZNF789
ATP5MF-PTCD1
ATP5MF
TMEM242
RPLP0
GCN1
AP1G1
METTL25
CCDC59
MANF
RBM15B
TSFM
EEF1AKMT3
METTL1
CYP27B1
RPS26
MYLIP
ARL6IP1
SEPTIN4
MTMR4
RDH5
ITGA7
BLOC1S1
WASHC5
NSMCE2
NCBP2AS2
NCBP2
WDR53
FBXO45
ZFAND4
TFCP2
SHBG
FXR2
CDCA3
MEF2A
TMEM222
SP2
JPT1
GTF2H3
EIF2B1
MTMR2
UBB
VPS33A
HSPA5
HAGH
FAHD1
TOMM40
IDH3B
L3MBTL2
GPN2
GPATCH3
TRIP12
FBXO36
DNAJB12
TIMM22
PKLR
FDPS
GIPC1
UBN1
GLYR1
MAGOHB
COPS8
AP3M2
SNRNP70
MVD
RERE
HMGCL
ACTL6A
WDR25
WARS1
RPS3
NDUFS7
ATF4
NMNAT1
LZIC
VAMP1
HMGCR
ZNF212
PNRC1
BAZ2A
ATP5F1B
SSNA1
ANAPC2
SMN2
SMN1
UNK
H3-3B
ID2
SRSF7
BRIP1
UBE2B
CDKL3
RNF103-CHMP3
RMND5A
HMGB1
USPL1
PRSS22
UBQLN1
C12orf43
ZNF56
RNASEH2C
KAT5
P4HB
ARHGDIA
ARF4
ALKBH3
NDUFB5
MRPL47
IARS1
CDKN2C
FAF1
CALR3
C19orf44
UBALD2
GSTO2
TEPSIN
NDUFAF8
ATG9B
ABCB8
IER5
MED23
GTF3C5
RPUSD4
FAM118B
AMOTL2
MRPL21
IGHMBP2
TGFBRAP1
C2orf49
MAGOH
G3BP1
TIMM21
FBXO15
MPV17L2
PEX3
ADAT2
GPAM
DUS2
DPEP2NB
DDX28
NABP1
SPRYD3
GHITM
PRR5L
COMMD9
PSTK
KANSL2
C5orf51
TSPAN31
MARCHF9
CDK4
AGAP2
ZNF143
MCM7
AP4M1
TCF12
MRPL48
HPS5
GTF2H1
RPL22L1
SON
GART
RPS11
RPL13A
PEPD
APTX
DNAJA1
CD68
EIF4A1
LOC100996842
MPDU1
ZNF8
DGLUCY
RPS6KA5
RPS28
NDUFA7
FAM149B1
ECD
PLK2
GSTA4
PFKM
SENP1
ADK
EIF4A2
VPS37A
CNOT7
SRSF1
RBX1
SUPV3L1
ATXN2L
DCAF8
MRPL58
PACSIN2
SLC25A36
ZNF540
ZNF571
COA6
C19orf48
CTDP1
PCCB
FEM1A
KCTD5
GRHL2
RAP2A
DYNLL1
BORCS7
COQ9
CIAPIN1
PNKP
AKT1S1
TBC1D17
RPP30
SLC25A42
MRPL27
EME1
HNRNPUL1
MRPL45
EIF5
ZNF585B
ZNF383
FDFT1
ACSL3
TMEM39A
POGLUT1
SFSWAP
FANCD2
PAN2
IL23A
PPP1R8
CNOT3
MFN2
RPL5
BAGE5
BAGE4
BAGE3
BAGE
CHCHD1
ZSWIM8
FUT11
VPS11
ITGB3BP
EFCAB7
ING3
ARL15
TMEM217
TBC1D22B
MRPL39
HOMEZ
DNTTIP2
TET3
POMZP3
MED4
APLP2
MTERF4
TOB2
CHCHD6
XRRA1
SPCS2
SLC25A19
PSME3
BECN1
SLC25A53
FAM199X
SEC13
SPRYD4
SLC7A6OS
PRMT7
UBE3B
KCTD10
ZSWIM7
TTC19
ZNF574
GRIK5
TMEM190
TMEM238
RPL28
TSN
SNRPC
USP42
TULP3
SEL1L
C9orf85
ABHD17B
HERPUD1
CALR
RAD23A
FARSA
SRPRA
DBNDD2
ABT1
DIABLO
FAM126A
POLG
PTP4A1
TAOK2
NDUFB8
HIF1AN
COPZ1
TRMT61B
MAIP1
RLF
MTHFD2
ELAVL2
TEDC1
CRIP1
ENSA
ASF1B
PPIA
RGS14
LMAN2
AFF1
ZCCHC4
SRSF11
LRRC40
RPL12
LRSAM1
NUFIP2
SLC25A41
KHSRP
MRPS16
DNAJC9
SLC34A2
MRPS11
MRPL46
NOLC1
OAZ1
MIS18A
TFRC
ACAD9
SF3B5
BRIX1
F11R
RPL3
TBL3
RPS2
RNF151
NOXO1
HOXD9
HOXD8
PHF5A
ACO2
ZNF839
HOXD10
GID4
ATPAF2
TAF6
MBLAC1
CNPY4
YWHAQ
AAAS
ERICH4
DMAC2
TBRG4
RASEF
ATP5IF1
OAT
CHD4
SUPT5H
RPS16
ATP6V1G1
RAB4B
MIA
USP30
NMT1
DCAKD
CCT2
ADPGK
CSRNP2
GTF2B
METTL9
DDX46
ATG7
ZNF721
PIGG
HGS
ARL16
MICU2
VAMP2
PER1
BRF2
RPS12
VCPKMT
FAM53C
CDC25C
TRUB1
CBWD5
CBWD3
SLC30A6
TMEM262
ZFPL1
CDCA5
TNKS
POLR3F
DZANK1
DDX50
KCNIP2
PSPH
CCT6A
FREM2
MCCC1
ADNP
EEF2
HNRNPL
IDI1
WDR37
PISD
LRP5L
CDH1
KAT7
FAM133B
DDX19A
ICE2
UMPS
DNAJC19
EVI5L
TBC1D22A
YPEL2
COQ8A
CASC3
LAS1L
CFAP43
CWC25
RBM14-RBM4
RBM14
CYLD
DCP1A
WDR11
MRPL4
GOSR1
TUFT1
EIF1
SLC25A3
FRA10AC1
ECSIT
CNN1
ZSWIM6
RRBP1
CBWD6
KDM5C
TMA7
CCDC51
ATRIP
STX16
GTF2IRD2
GTF2IRD2B
FBXO24
LRCH4
POLR3D
NBEAL2
CCDC12
NAA80
IFRD2
HYAL3
C2orf42
RPS9
TSEN34
RHOB
RANBP6
KIAA2026
ATP8B1
HMGCS1
CCNC
COMMD1
CCT4
PARPBP
NUP37
ZNF687
EEF1AKNMT
RWDD1
PA2G4
VCL
SAP18
CFAP410
ZNF335
ZWILCH
SNAPC5
RPL4
KAZN
CCDC86
RETSAT
ELMOD3
SDHB
CCDC130
NUP160
SRSF6
PGBD4
EMC7
CCDC97
TIMM17A
LMOD1
PLA2G1B
BSDC1
AZIN1
DSTYK
FAM180B
NDUFS3
KBTBD4
TOP3A
SMCR8
RTTN
KDM2A
DHRS3
TMEM79
SMG5
PARL
MSTO1
TMEM53
ARMH1
PTCD3
POLR1A
CKAP2
VPS36
C8orf33
OAZ3
GTF3C3
C2orf66
NDUFAF3
IMPDH2
DALRD3
PSMD3
MFSD11
METTL23
SRSF2
SLC26A2
DCP1B
SPTY2D1
CDKN1A
ZFYVE21
XRCC3
UHMK1
NRDE2
RIN1
BRMS1
B4GAT1
SPRING1
RNFT2
PKN2
TMEM126A
COQ10A
ANKRD52
WDR89
RPL18A
IL4I1
NUP62
ATF5
SSR3
SETD3
CCNK
TACSTD2
PDE6D
COPS7B
PLEKHM3
TENT5C
NARF
CYBC1
MRPL37
CYB5RL
TJAP1
TMEM256
PLSCR3
NLGN2
TBCB
POLR2I
OVOL3
CLK3
SLC2A1
NECAP1
GTF2I
ZNF444
RARS2
ORC3
SACM1L
AP5Z1
PNP
PIP4P1
TBC1D23
RANBP2
ATP9B
LRRC29
TFIP11
POLR1F
GTPBP10
TMEM88
SNRPD3
GUCD1
KDM6B
FAR1
COMMD4
NOC4L
DDX51
C4B_2
C4B
STK19
LOC110384692
DXO
C4A
FBXO28
WDR4
ZBTB4
SLC35G6
POLR2A
TSKS
AP2A1
ZBTB45
SLC27A5
PANK2
AGFG2
SF3A3
LMTK2
PTEN
KLLN
PRTG
GNAL
CHMP1B
SUMF1
DOK3
DDX41
U2SURP
AK2
CRLS1
ATP5PD
ZFAT
BCKDK
KAT8
BRAP
ACAD10
CCNH
C12orf65
MAPKAPK5
KLF5
GPR84
NOL11
U2AF1L5
U2AF1
TOX4
RAB2B
CRBN
POLG2
DDX5
CEP95
ARHGAP19
CIC
PDCD6IP
TDG
C12orf73
PEX26
CORO7-PAM16
CORO7
DNAJA3
SLC24A1
PCNA
TMEM230
ISOC2
TMEM128
FAM76B
CEP57
NDUFB10
RPL3L
VAC14
UBAP2
NAT10
ANKFY1
PSMF1
TMEM254
USP8
RPTOR
SFPQ
ANKHD1-EIF4EBP3
ANKHD1
PITPNM1
CDS2
CEP350
NUP54
THUMPD1
BCL2L13
ATP6V1E1
CCDC134
TEFM
PGAP2
SYNGAP1
CUTA
PHF1
STIL
UBE2C
ZSCAN22
TIMM50
STARD4
ZNF77
ZC3H10
RPL41
ESYT1
SELENOH
BTBD18
HDAC6
TRA2B
XPO1
ATP5MC2
RPL22
RNF207
KDM4D
CWC15
MTRR
FASTKD3
PPP4R3B
ACOX3
TRMT44
TSR1
SGSM2
NDUFV1
RBSN
IVD
EEF1AKMT4-ECE2
EEF1AKMT4
ALG3
TMEM167B
RPSA
SCRN2
LRRC46
OSBPL7
LGMN
MDM4
KCTD7
CAND1
ZSWIM4
WDHD1
SOCS4
HAUS5
SPTLC2
RFX1
SRP9
MMUT
CENPQ
WDR6
METTL2B
ANKZF1
OXNAD1
DPH3
RPS3A
RUBCN
CBX5
HNRNPA1
RPS20
UQCC3
LBHD1
CSKMT
C11orf98
PDK2
GOLGA3
THRAP3
RPL11
NRDC
HUS1
ETF1
PHAX
ALDH7A1
ERCC5
GSC2
LEMD3
RPL35A
IQCG
LMLN
TMEM14A
ATF7-NPFF
ATF7
UNKL
C16orf91
PERCC1
TCTN3
NUF2
MIS12
DERL2
SCFD1
COX10
RBM19
SARAF
FOS
THOC1
MRPS15
DAZAP2
C14orf93
POC5
CKAP2L
SRCAP
LOC730183
PNRC2
SKP1
THAP9
SEC31A
SGO1
PRKAG1
TMEM265
PHKG2
GINS1
CLN8
METAP2
HOMER1
C6orf226
NOP58
NUP133
LONP1
CATSPERD
ASH2L
RAB11A
MRPS23
EXOSC3
ATR
CAAP1
ABL1
FLYWCH1
FAM83D
MAEA
SNX11
CBX1
SETDB2-PHF11
SETDB2
CAB39L
TFPT
PRPF31
SLC44A2
MARCHF8
DNM2
PACSIN3
ARFGAP2
TMBIM6
SWSAP1
EPOR
DMRT2
NDUFB6
TMPO
RFXANK
BORCS8-MEF2B
BORCS8