ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX22001292 | DLD-1
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◢ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◢ SRX535453: A-375

◢ SRX535454: A-375

◢ SRX5501657: A-375

◢ SRX5501659: A-375

◢ SRX5501661: A-375

◢ SRX10131662: Bronchial tracheal epithelial cells

◢ SRX10131663: Bronchial tracheal epithelial cells

◢ SRX20436771: DLD-1

◢ SRX20436779: DLD-1

◢ SRX22001291: DLD-1

◣ SRX22001292: DLD-1

◢ SRX22001293: DLD-1

◢ SRX10715331: HCB1

◢ SRX10715344: HCB1

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◢ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX20230567: Ishikawa

◢ SRX20230568: Ishikawa

◢ SRX20230569: Ishikawa

◢ SRX20230570: Ishikawa

◢ SRX20230571: Ishikawa

◢ SRX20230572: Ishikawa

◢ SRX20230573: Ishikawa

◢ SRX20230574: Ishikawa

◢ SRX10144542: Kasumi-1

◢ SRX10144543: Kasumi-1

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX7366779: MCF-7

◢ SRX7366780: MCF-7

◢ SRX7366781: MCF-7

◢ SRX7366782: MCF-7

◢ SRX7366783: MCF-7

◢ SRX7366784: MCF-7

◢ SRX244177: MM.1S

◢ SRX244180: MM.1S

◢ SRX327758: MM.1S

◢ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◢ SRX1637467: MOLT-4

◢ SRX1637469: MOLT-4

◢ SRX1637470: MOLT-4

◢ SRX24723215: MRC-5

◢ SRX24723217: MRC-5

◢ SRX24723219: MRC-5

◢ SRX24723221: MRC-5

◢ SRX2375362: MV-4-11

◢ SRX2375366: MV-4-11

◢ SRX14127531: OCI-AML3

◢ SRX14127532: OCI-AML3

◢ SRX14127543: OCI-AML3

◢ SRX14127544: OCI-AML3

◢ SRX18455086: OCI-AML3

◢ SRX18455087: OCI-AML3

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◢ SRX4023329: T-47D

◢ SRX4023330: T-47D

◢ SRX728779: THP-1

◢ SRX728780: THP-1

◢ SRX9730732: THP-1

◢ SRX9730733: THP-1

◢ SRX9730734: THP-1

◢ SRX9730735: THP-1

◢ CDK9: STRING

LOC102724770
DGCR6
MAMDC2
DUX4
H4C12
H4C11
H2BC14
H2AC14
GSTA4
H2BC15
H2AC15
ARL4D
H4C14
H3C15
H3C14
H2AC19
H2AC18
UBC
FRG2C
IER3
FLOT1
GULP1
KLF6
H4C2
H3C2
H2AC4
H4C1
HEXIM2
WDR74
STX5
H2BC5
H1-4
CALM2
EIF2D
DRD4
BTNL9
DCP1A
H4C9
H2BC11
H2AC11
CCDC200
GDF15
LRRC25
H4C15
ERRFI1
PRDX1
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
KMT2A
H3C4
H2AC7
H4C5
H2BC7
EEF1A1
MTRNR2L1
FAM53C
CDC25C
ZBTB4
SLC35G6
POLR2A
KRT19
KRT15
AREG
EREG
H4C3
H1-6
H2BC21
H2AC21
H2AC20
ZFAND5
GTF2IRD2
LOC102724265
RGS19
OPRL1
LKAAEAR1
BBC3
TMEM262
SLC9A1
MTHFD2
ARPP19
H3C13
H2BC18
PKM
VRK2
HEXB
ID2
GAPDH
TRIB3
H2BC4
H2AC6
NT5C
CITED2
ARHGAP32
PMAIP1
RNF43
PPP4R3B
DRG2
EGLN1
DDAH1
CCN1
NUCKS1
PHRF1
H1-2
NECTIN4
INO80D
STX16
TMEM242
CALM1
ZC3H11A
ZBED6
BCL9L
H2BC17
H2AC17
H3C12
ZNF207
C17orf75
TMEM68
TGS1
VWA8
ZER1
ZCCHC3
C20orf96
ACYP2
DCAF10
GTF2H2C_2
GTF2H2C
GTF2IRD2B
TOB2
RBM39
ZNF341
SYDE2
H3C1
H1-1
POLR3D
NRL
PCK2
LMNB2
PERP
EPCAM
RHOB
ACSF3
ZNRF3
RCOR3
PTBP1
AAR2
MKNK2
KRT39
MED23
H2AX
DPAGT1
HMBS
GTF2H2
COL23A1
TMSB10
GEMIN7
ZNF296
PRSS23
H4C6
H4C7
H3C7
H2BC9
LAMA3
TNFRSF6B
PLEKHM3
TPD52
H4-16
H2AJ
PRSS22
AMOTL2
KRT8
MFSD11
SRSF2
NABP1
SRSF6
JUNB
CIRBP
FAM174C
STX18
IST1
ZNF518A
TUBGCP3
NFKBIA
TRA2B
TAF12
ELOB
SDC4
SMAD3
ONECUT3
RPL18A
TBC1D22A
BUD13
MIER1
DNAI4
PATZ1
TP53BP2
HNRNPA3
FLOT2
DHRS13
FAM227B
DTWD1
MGAT4B
LTC4S
GRAMD1A
TMA16
P4HA1
TPI1
SPSB2
MEAK7
LOC388282
NPY4R2
NPY4R
C5orf24
ARHGEF35
AFAP1
GBA
MYL12A
LATS1
UBE3C
ANXA4
TACSTD2
PPFIBP2
DDIT4
TBC1D14
GTF2A2
TRAM2
ADPRHL1
MAPKBP1
TMEM250
ETS1
PRAG1
RPL10A
SRSF3
H2BC12
H2AC12
DMTF1
KRT18
MRPL44
SRCAP
LOC730183
ZNF143
H4C4
SNRPG
FAM136A
LOC100129484
TNRC18
GADD45B
STN1
KNTC1
NFIB
HIC2
INO80
ALDH3A1
GRHL3
PSMD8
ZNF410
HMGN2
RORA
CTNNB1
SLC24A1
RTN4
BCAS4
MANF
RBM15B
SLC44A2
KEAP1
ARL15
SIPA1L1
TNFSF15
HRH1
USP30
CASC3
MPHOSPH10
MCEE
PRRC2A
AIF1
SNX5
MGME1
COX18
KIF21A
ZNF609
TBX3
MTF2
MTMR2
FRG2
ZMPSTE24
SAR1B
RNF220
ZC3H12C
FRA10AC1
GTF3C2
XPO4
PHKB
ITFG1
MLLT10
SKIDA1
PIAS3
CFL2
CCDC153
CRIM1
EAPP
RBM25
TM2D1
DDX6
H4C13
H3C11
H2AC16
H1-5
KANK2
BMP4
TMC1
NDUFS7
ODF3L2
MADCAM1
RMDN2
PFKFB3
NFYC
TUBA1B
GET4
ZNF292
TRIB1
NOXA1
ADAP1
DYNLL2
CHD2
PPIA
EIF1
RAD54L2
DNAJC19
UGP2
TBC1D19
MTCH2
ARID3A
DNPH1
FAM240C
MRPL21
IGHMBP2
EIF4A3
ATP8B1
AFF1
LHX9
C1orf53
ITGB1
EIF4G1
LSM14A
CHAC1
CBX4
PNRC1
LDHA
RFT1
SPTAN1
RHBDD1
METTL15
KIF18A
RNF146
POLR3H
TGFB2
NIPSNAP2
TRDMT1
CREBL2
ZBTB37
FAM162A
CCDC58
NOXO1
ATF4
PDF
NIP7
COG8
DUS1L
USP3
DARS1
USP24
ZNF706
GFER
SYNGR3
KDM7A
MCL1
WDR31
BSPRY
UBE2J1
TBL1XR1
ZFAND6
NFKB1
FECH
TMEM249
SLC52A2
FBXL6
ANKRD18A
RUNDC3B
GTF3C5
UBE2S
KMT2E
BMF
ARID1A
SUCLG2
MTA3
TRIM55
TFF1
MAIP1
ZC3H4
H2BC6
KLHDC9
RGS3
DOCK7
TATDN3
NSL1
ZBTB7B
TERF2
TMEM106B
SYK
NIBAN2
TMEM88B
VWA1
TOB1
HUS1
PDCD2
VHL
SMIM19
SLC20A2
PKP4
CCDC148
DENND6A
ASB2
TJP1
VPS54
LAMP1
SLC25A51
ERCC1
CDKN1A
MEMO1
HILPDA
LOC100130520
CD300H
ZBTB45
SLC27A5
COMMD1
MTIF2
TRIP11
TJP2
LEPROTL1
ELF3
GATA6
TMEM222
HSPA5
INTS12
GSTCD
RPL5
ATG5
SEC11A
PSMA1
KAT6A
ZDHHC17
EBAG9
TM2D2
ADAM9
ERMAP
SVBP
TRIOBP
EPB41L4B
FAT1
NSF
SLC39A14
RBM43
MUC20
IL20RA
KMT5B
ZCCHC4
SUPT4H1
ATP9B
ZNF76
SMC5
YWHAH
C22orf24
REL
BCL9
RAPH1
NUF2
VARS2
GTF2H4
MYLIP
ACTB
ANKRD40
EIF4G2
STAG1
MUC3A
SAV1
FUT4
C15orf61
PARP9
DTX3L
HMGB1
BANP
WDR11
ZSWIM7
TTC19
ZNF770
HOMER1
CDH1
BCL3
PCBD1
ARHGEF38
MRPS31
HNRNPF
ZNF286A
STMP1
BCL2L1
CREBZF
FANCL
CAV1
RPS3
NME1
ACTRT3
MYNN
MFF
PSMC1
PAIP1
SHB
SH3RF1
CMTM8
DLX4
FOXJ3
SEC13
AURKAIP1
PSMF1
REXO4
ADAMTS13
GPN2
C6orf62
ZFP62
LNPEP
GADD45GIP1
ZBTB38
TGFA
SEC24D
EPN2
TMEM41A
RPL27A
KATNBL1
MRPL1
PCBP1
UFL1
AAK1
RALGAPA1
EPHB2
MTERF4
HERPUD1
ZBTB26
RABGAP1
IPO9
MTHFD1L
EZR
BTG1
NFAT5
USP34
SMCHD1
AHR
UBE2E3
SPRY2
PPL
LRP5
PATL2
LRP6
UBE2V2
DEK
CHMP6
DISP1
CEBPA
CEBPB
SLC16A5
IFITM1
IFITM2
PAQR5
IFITM5
WSB2
ZNF789
ATP5MF-PTCD1
ATP5MF
BRIX1
MRPL3
CIAO3
UQCC3
LBHD1
CSKMT
C11orf98
SLC25A3
CTDSP1
KDF1
MTHFS
PDE2A
USPL1
EIF2S2
CDC73
FRG1
SLC35A3
HEBP2
NUDT4B
NUDT4
TMEM45A
ARHGAP45
ARHGEF5
CLU
PLD4
KLRC2
SOD2
WTAP
EIF4A2
CHCHD1
FUT11
C14orf93
KIAA0232
NR4A3
ARL5A
SNTB2
SOCS1
IGF2R
PSMC6
ACOT2
CD68
EIF4A1
EXOSC8
ALG5
CGGBP1
SP1
C3orf38
TACC1
PXT1
KCTD20
KAZALD1
TCF20
IRS1
PAK6
ITGB6
TM4SF1
SRSF1
PCNX4
XBP1
PTP4A2
H1-3
H3C6
NAPEPLD
UAP1L1
MAN1B1
TMEM95
KCTD11
DBF4B
RPL13
SLC38A2
TUBA1C
THEM4
RNF6
AKIRIN1
PTDSS1
MTERF3
ANKRD36C
PIK3R1
BRD2
SENP6
PRDM5
CASD1
ZNF562
ALG13
TMCO4
TNS4
FUS
FAM166A
STPG3
ARF6
NELFB
MAP2K2
CENPB
CDC25B
SMG6
UBA2
TMEM216
SPEF1
CPPED1
ZYX
FAM131B
CD55
MACC1
MUC1
DCUN1D2
SRR
PGM1
PHLDA2
NRP1
SLCO1B3-SLCO1B7
SLCO1B3
NSFL1C
SHC1
SMIM12
YWHAQ
SLC44A1
SNX16
STX6
METAP2
PYGO2
PBXIP1
LOC101928120
EXD2
RRP1B
HSF2BP
FTH1
PSKH1
NRN1L
PHLDA1
PKP1
TMEM17
LRRC61
ACTR3C
BCAR1
RPS5
RNF225
DR1
SCNN1A
LTBR
TRIM3
TIMM10B
SELENOT
SOCS5
BAZ1B
CXXC5
TEX22
DSG2
DLC1
SYT8
TNNI2
STAT5B
RIPOR3
MAD2L1BP
GTPBP2
MDM4
CCT4
RPL6
PTPN11
ELF2
TEX46
KDM1A
ZFP36
PLEKHG2
ZNF623
SP3
THBS1
DCLRE1B
AP4B1
MTHFD2L
ERN1
SYNJ2
RSPH9
ISG20
ZFHX3
SRXN1
F3
SLC9A5
FHOD1
MOV10
OR10V1
HTRA2
DQX1
PTEN
KLLN
PCBP2
LYPLA2
GALE
LEKR1
TGM1
RABGGTA
FOXJ2
UPF2
UGDH
RANBP9
CTBP2
FAM184A
VWA7
SASH3
POR
NUDCD3
SLC39A13
HEXIM1
XRCC5
AGPS
PGGT1B
SRSF4
ITGAV
LSR
C4orf36
RPL19
CACNB1
EPM2A
CCNI2
NIPA1
KIF3A
PDE6D
COPS7B
BOD1L1
SNAP47
JMJD4
TVP23B
SNRPC
HNRNPU
FH
AKAP10
LRP2BP
RCC1
GSK3B
OAT
SMARCA4
EPG5
SLC25A37
FAM151B
TNFSF9
DLAT
ANKRD37
PRKCE
CRYBG1
PSME4
GOLGA7B
PRTFDC1
ZC3H6
SRP68
ZACN
GALR2
PACSIN3
ARFGAP2
RPL37
CARD6
ARL6IP1
TSPAN10
NPLOC4
CLDN4
MED16
PHF3
STK40
FOXH1
ANP32B
PPP1R16A
PAK1
PDS5B
KCNQ1
KDM4B
SRSF7
TUBB4B
VPS45
MIDEAS
STARD10
EMC4
INTS6
HECTD2
ZNF621
PBK
ZAR1L
BRCA2
LAMC2
SGK1
TESMIN
BAHCC1
ICMT
HES3
CELF2
SCRN1
MYO1B
CLSTN1
TMPRSS13
SULT1C4
TRIP4
PCLAF
TCF12
DPY19L4
MOB3A
IZUMO4
POLDIP3
AVPI1
WIZ
RBM45
PDE11A
KIF22
BLOC1S6
OCIAD1
TTC26
CEP135
ZNF185
SLC39A10
ZNF276
VPS9D1
CHAMP1
FGGY
RNF135
TIA1
PCYOX1
MPP5
RHOG
SMIM3
YAP1
SMURF2
EP400
DPY19L1
MB
FOXO6
GRHL2
DMAP1
GMFB
ERCC6L2
LEMD3
SCFD1
MARCHF7
PLK2
ACTG1
SMAGP
NDST2
SCAP
CELF1
EHMT1
DPYSL2
ZSCAN9
ZBED8
DCK
UEVLD
DNAAF2
ARRDC1
ABCA5
H3C10
H2BC13
H2AC13
PTPMT1
TSKU
PFKL
MYO5A
XRRA1
SPCS2
NDUFC2-KCTD14
NDUFC2
HSPA9
STK11
SERTAD1
PRX
MFSD10
ZNF236
CROCC
SH3D19
ENPP7
SERPINE1
TNKS1BP1
HKDC1
KRT72
TOMM22
ARHGEF12
GPAA1
EXOSC4
LRRC37A3
TET3
DDX59
REPIN1
ATL2
UBE2F
TMEM168
IMPACT
KLF9
KIF5B
SRD5A3
UGCG
DMXL2
FAIM
NLN
SGTB
SDC1
AGR2
DCAF8
TACO1
SCRT1
DGAT1
COMMD2
ADK
TTI2
RBL2
SERTAD3
DGKZ
COPS3
PPP1R18
NRM
PTPDC1
TM9SF3
COMMD10
RICTOR
GOLM2
E2F7
CTSD
SGPL1
PRELID2
C19orf33
STON1-GTF2A1L
PAFAH2
KMT2D
RHEBL1
PEX3
ADAT2
NXF1
DIP2A
CCAR2
C8orf58
MRPS15