ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX10144543 | Kasumi-1
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◢ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◢ SRX535453: A-375

◢ SRX535454: A-375

◢ SRX5501657: A-375

◢ SRX5501659: A-375

◢ SRX5501661: A-375

◢ SRX10131662: Bronchial tracheal epithelial cells

◢ SRX10131663: Bronchial tracheal epithelial cells

◢ SRX20436771: DLD-1

◢ SRX20436779: DLD-1

◢ SRX22001291: DLD-1

◢ SRX22001292: DLD-1

◢ SRX22001293: DLD-1

◢ SRX10715331: HCB1

◢ SRX10715344: HCB1

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◢ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX20230567: Ishikawa

◢ SRX20230568: Ishikawa

◢ SRX20230569: Ishikawa

◢ SRX20230570: Ishikawa

◢ SRX20230571: Ishikawa

◢ SRX20230572: Ishikawa

◢ SRX20230573: Ishikawa

◢ SRX20230574: Ishikawa

◢ SRX10144542: Kasumi-1

◣ SRX10144543: Kasumi-1

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX7366779: MCF-7

◢ SRX7366780: MCF-7

◢ SRX7366781: MCF-7

◢ SRX7366782: MCF-7

◢ SRX7366783: MCF-7

◢ SRX7366784: MCF-7

◢ SRX244177: MM.1S

◢ SRX244180: MM.1S

◢ SRX327758: MM.1S

◢ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◢ SRX1637467: MOLT-4

◢ SRX1637469: MOLT-4

◢ SRX1637470: MOLT-4

◢ SRX24723215: MRC-5

◢ SRX24723217: MRC-5

◢ SRX24723219: MRC-5

◢ SRX24723221: MRC-5

◢ SRX2375362: MV-4-11

◢ SRX2375366: MV-4-11

◢ SRX14127531: OCI-AML3

◢ SRX14127532: OCI-AML3

◢ SRX14127543: OCI-AML3

◢ SRX14127544: OCI-AML3

◢ SRX18455086: OCI-AML3

◢ SRX18455087: OCI-AML3

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◢ SRX4023329: T-47D

◢ SRX4023330: T-47D

◢ SRX728779: THP-1

◢ SRX728780: THP-1

◢ SRX9730732: THP-1

◢ SRX9730733: THP-1

◢ SRX9730734: THP-1

◢ SRX9730735: THP-1

◢ CDK9: STRING

MAMDC2
OSGIN1
LGR6
UBE4A
WDR74
STX5
MTRNR2L1
MUC3A
PMF1-BGLAP
PMF1
TNK2
DUX4
GSDMD
ELOA2
IAH1
GP6
RAG1
TRAF6
DHX16
PPP1R18
NRM
HACL1
BTD
CPXM1
TRIM48
LOXL2
FABP6
UCN3
NME1
MEF2C
DENND3
INKA1
CDHR4
UBA7
TBKBP1
C3
FMNL1
TMC8
TMC6
LOC102724770
DGCR6
HNRNPF
AKR1A1
BMS1
SLC9A3R1
RAB37
CRYAA2
CRYAA
KRT17
CTSD
IFITM10
ZNF718
ZNF595
SARAF
LEPROTL1
AUNIP
DRC7
TOR1AIP2
TOR1AIP1
RHPN1
SLC38A10
VASP
PRL
ADAMTS15
MTSS1
NFRKB
NCF1
TACO1
TMEM275
ENG
HNF4A
NUF2
CHST13
AGTRAP
NINJ2
S100A8
ARHGAP25
SUN2
CTRC
DPY19L4
PRRC2B
RPS6KA1
CSF1R
EGFL7
SHISA7
CYB561
HRCT1
SPAAR
MPPE1
OLIG1
CLIP3
ZNF562
EAPP
NKX6-3
KCNK9
ZMIZ1
CACNG4
KLF2
FAM107B
KIF5C
MRPS18C
HELQ
LYL1
TMEM104
NAT9
TNFRSF1A
SH2D3A
VAV1
CCDC149
TPD52
OLFML2A
NIBAN3
GALNT7
C1orf159
PDXK
MTRNR2L8
RNF166
CTU2
MAPK6
CSK
ZNF285
UHRF1
TBX10
ACY3
ZNF792
CLEC4E
RXRA
TMIGD2
FSD1
STING1
SMIM33
USH1G
OTOP2
NFATC3
GTF2H5
PLXNA4
CAMK2G
STARD8
FAM180B
NDUFS3
KBTBD4
ZNF696
F11R
NFE2L2
DUSP7
PRAM1
EVPL
PHLDA3
PPP1CA
TBC1D10C
CARNS1
METRNL
MRPL23
SAMD14
ZBTB10
IGF2
GTF3C3
C2orf66
HM13
ANXA6
ZNF620
TMED9
B4GALT7
ITGA5
ADA2
CEP295NL
BCL3
CMTM7
RFLNA
WDR11
GNAI2
SUSD1
EPHA8
ARHGEF12
GNA15
RNASET2
TLCD5
FCMR
SPINK8
NBEAL2
CCDC12
CSRP1
INAFM1
RNF220
PTPRN2
CENPI
DPYSL4
NDUFS7
STX16
FRA10AC1
TEFM
SMG8
NEK6
ODF3L2
MADCAM1
SKIV2L
NELFE
TPGS1
STK10
CHSY1
ZNF221
ADAP1
LYN
SIGLEC5
KISS1
SF3A3
FHL3
TRIM41
SLC39A3
LIME1
SLC2A4RG
ZNF852
CYTH4
CNPY3
B4GALT3
PSD4
WNT7B
LHX1
CLEC5A
MAF1
CYC1
WDR97
SCAMP2
TPM4
SAMD11
STAB1
SIPA1
TMEM262
TAF12
GPAA1
EXOSC4
ACBD5
RMDN1
CPNE3
FBXO24
LRCH4
ZASP
SAP25
AHDC1
LMO2
SLC24A1
PHC2
RGS19
OPRL1
LKAAEAR1
GSX2
PDE6B
COL23A1
MYO1G
LYRM1
DCUN1D3
TBC1D16
PCSK4
REEP6
TGM5
PRR5L
DYRK1A
PLAUR
EXT1
NTMT1
PCBP3
PPP1R9B
CBFA2T3
DCAF10
RASAL3
SHANK1
CLEC11A
ITGA9
POTEJ
CRYBB2
SH3BP2
TEPSIN
NDUFAF8
CEP131
ZNF391
SLCO2A1
POTEH
SSBP1
ARPC3
RHOF
POPDC3
STK32B
GFM2
STXBP4
COX11
GREB1L
TMEM72
MUC6
TOP3B
PITPNM2
AK1
UNC13D
ZNF207
C17orf75
GATD3B
GATD3A
ZDHHC6
VTI1A
LPIN1
ABT1
DGKZ
HBEGF
NFILZ
PRRG2
NOSIP
PSD
FBXL15
ZNF550
ZDHHC18
SHANK3
SBK3
SBK2
IER5L
ANKRD40
MAPKAPK3
CISH
LINGO1
PGLYRP4
WNT1
WNT10B
RASGRF2
S100A9
KLHL20
GRPEL2
NCF2
MMEL1
GTF2H2
SH2D3C
CDK9
ZNF408
ARHGAP1
OGFOD2
ARL6IP4
FGGY
PLEC
NMNAT1
LZIC
GTF2H3
EIF2B1
DHRS12
TFAP2E
PPIAL4C
PPIAL4A
H4C14
H3C15
H3C14
H2AC19
H2AC18
ACTB
LIMS1
GOLGA3
MRPL30
MITD1
GSN
MS4A15
TRIP4
PCLAF
CCAR2
C8orf58
TCTEX1D4
BTBD19
NRROS
THUMPD3
USP32
PLK3
LPCAT2
FRG2
WDR36
USP3
GRK2
SIRT4
RORC
IL16
IKBKE
HIP1
FBXO11
LRCH1
LAPTM5
NPEPL1
CCDC77
KDM5A
SEPTIN9
NFXL1
CA12
PYCR3
GFUS
MTMR9
TPT1
TIGD5
EEF1D
CRH
CD33
PSMC5
FTSJ3
HEMK1
C3orf18
GNG14
POLD1
NR1H2
DHPS
FBXW9
DUSP6
IL32
EMID1
ATP12A
ARAP3
CCN4
SLC30A8
EMILIN1
OST4
KHK
NABP1
ITGA4
CELF2
ACSS1
OR4K2
TMEM45B
KBTBD2
CEP112
BID
ELMO1
TXLNB
LAMB4
TM9SF1
IPO4
STX10
IER2
CCM2
HHEX
MICALL1
LPAR1
ING4
TEAD3
NOXA1
TSPOAP1
TMCC2
PPP6R2
FOXI1
ERLIN2
BAIAP2
PPIP5K2
RPL19
CACNB1
ADRA2A
PADI4
IREB2
RARA
LTB
LST1
NCR3
STX1A
TBXA2R
EDC4
SEC14L1
ADAM10
NEDD9
ARHGDIB
SERPINB9
MPO
UNC5A
SNRPB
DUS1L
CARMIL1
CDH23
CERS3
ASPSCR1
RUNX1
RNASE2
CLCA2
NUP54
SLC44A1
MTA2
TUT1
RASGRF1
ADRM1
DGCR6L
FASLG
SIGLEC8
LSG1
RAB24
PRELID1
UBE2J1
ZNF276
VPS9D1
MYO18A
IFIT3
SLA
TP53I11
IL17RE
C1QTNF4
AATK
CDK5RAP1
UTP3
ZCWPW1
PPP1R35
MEPCE
EIF1AD
CST6
BANF1
RAB3IL1
P2RX1
SYN2
TATDN3
NSL1
RGS14
LMAN2
DMAP1
UBXN8
RAPGEF1
KIAA0513
PHYKPL
TNFAIP2
KCNN4
SLC18A3
CHAT
ZBTB45
SLC27A5
ZNF565
FURIN
AURKAIP1
FAM207A
PPIF
TARS2
NT5C2
MN1
NAIP
MMRN1
CLTC
PSMF1
PHB2
AP2B1
PEX12
RMND1
ARMT1
ZNF165
OR1F12
SNUPN
STXBP5
DLK1
SUCNR1
HPN
SIGLEC9
CD300C
LAMP1
MTRNR2L2
MSH3
DHFR
ANAPC5
MTPN
LUZP6
CD82
PI4K2B
CCL3L3
CCL3L1
LAMB3
NOL4L
FZD9
GMCL2
GRIFIN
PVALEF
POLR2E
GPX4
CSNK1D
MGAT4A
PTGR1
C9orf62
TRAF7
MRPL40
HIRA
NDST2
ANKRD13D
MNAT1
GNG2
NR2F1
FGF7
SDE2
SDCCAG8
CEP170
SDF4
B3GALT6
ARSG
SLC16A6
RASA3
TNFRSF4
ACOT11
LILRA2
DCP1A
JRK
C10orf88
WDR55
DND1
SENP6
PIGV
AKNA
CSNK1G2
ADORA2A
RFTN1
LHX6
PSCA
SIRPB2
LSM4
LMBR1
RCSD1
STAP1
MFNG
SFTPD
GTF2H2C_2
GTF2H2C
ARHGEF7
TSNAX
FBXW7
TUBB3
MC1R
ARAP1
HPCAL1
CD300A
LCP1
AGRN
PSD2
INTS12
GSTCD
GRB2
SLC16A3
APOA2
ZFP37
PLEKHO1
SLC22A16
FCER1G
CD7
TUBGCP3
TMA16
PROSER1
NHLRC3
TIMP2
NFE2
ASS1
SEC14L5
CIITA
LY86
CRHR2
GPR174
TTLL8
LINC01638
BAZ1A
PPIAL4F
PPIAL4E
PPIAL4D
ALG10
FLI1
ARHGAP30
COLGALT1
CSF3R
CNPY1
NFKB2
S1PR4
NCLN
DCAF12
MMP9
ANPEP
CXCL2
MAP1LC3B2
TCIM
CFAP410
RPS9
RGL2
PFDN6
WDR46
KRT80
PPP6R1
RAG2
IFTAP
CD36
KPTN
ALG10B
ZP3
PALD1
TMIE
ALS2CL
SSC4D
PTPN6
C12orf57
KLF5
PPP1R15B
MRPL1
GNAI3
SLC26A11
SLC39A4
CPSF1
RPS14
KCTD12
GLRX
PRLH
IPCEF1
GYPC
CALR
RAD23A
FARSA
CYREN
PADI1
FERMT3
TM4SF18
SIGLEC15
PTK2B
PDP2
SH3TC1
TM6SF1
TFF3
TNFSF9
ETV6
DAB2IP
MANF
ID1
PLEKHN1
KLHL17
TSPAN10
NPLOC4
TRAF3IP3
C20orf203
TMEM255B
ZNF384
BBS1
VPS18
PDLIM2
LOC112694756
ADA
C6orf136
C3orf86
TLCD3B
TAS1R3
INTS11
CPTP
COL8A2
MREG
CAMP
SELENBP1
NFKBIL1
DDX39B
ATP6V1G2
GALK2
COPS2
SSB
TMEM154
RET
FAM163B
TNFSF8
HDC
PRRC2A
AIF1
COX16
CRACR2A
DVL1
GPR19
GIMAP1-GIMAP5
GIMAP1
RUVBL1
ITGB3BP
EFCAB7
TTYH2
TRIB1
RASSF2
ST3GAL1
TSFM
SELENOH
MLXIP
NUP210
SLCO2B1
TMPRSS9
TSSC4
RPS7
PCNX3
MAP3K11
TBX2
STAT1
TNIP1
ZFHX3
NAPRT
MROH6
OSM
ARHGEF18
PPIL3
NIF3L1
ANKLE2
ARHGEF2
CXCL1
PLPPR3
SLC43A3
AZU1
PLD1
TYROBP
NFKBID
HCST
PXK
ARHGAP45
DUSP22
RAC2
KCNQ5
CEP170B
ATP2C2
IPPK
MYL12A
SYNJ2
RPL29
TFIP11
AGK
LEKR1
PPP1R16B
SH3BP1
LPCAT1
CHRNE
C17orf107
CLDN19
MRPL21
IGHMBP2
CXCL8
SELENON
MRPS16
DNAJC9
NDUFC2-KCTD14
NDUFC2
PODNL1
BMF
TNKS1BP1
USP4
ARMC7
TNFRSF9
DR1
TM7SF3
MED21
CAPZB
LRRC37B
BPI
TAGAP
ATG16L2
TNFAIP8L2-SCNM1
TNFAIP8L2
SCNM1
LYSMD1
KRTAP10-12
TSPEAR
NR1H3
ACP2
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
DDX23
UNK
H3-3B
MTF2
NAA80
IFRD2
HYAL3
HEXIM2
TBL3
RPS2
RNF151
FRG2C
KMT5B
CCNL1
CTNNB1
NOXO1
ZC3H6
FEM1A
ARL4D
DSTYK
PDE6D
COPS7B
CDCA3
EIF2D
CHPF2
ABCF2-H2BE1
ABCF2
CALR3
C19orf44
STX18
TMEM41A
BRWD1
TIMM21
FBXO15
UBC
LAT
NCBP2AS2
NCBP2
CKS2
UCKL1
SECISBP2
ATAD2
SPNS1
CALM3
NOTCH2
TSNAXIP1
PPP5D1
RANBP10
PPRC1
SOD2
PAFAH2
GSPT1
POLR2J3
TMEM11
WTAP
HMGB1
WDR53
FBXO45
GTF3C5
TMEM199
SEBOX
POLDIP2
NPRL2
HDGF
TMEM222
TMEM115
CYB561D2
SPATC1L
ARHGAP35
CALM1
AP2S1
GATB
FOXJ3
HEXA
CLPB
RASSF1
OPA1
SSNA1
ANAPC2
RBL1
CCDC88A
TSN
DOHH
TOMM22
CALM2
SEC13
MRM3
LRP6
GLOD4
SLC39A1
CREB3L4
CYCS
TCF3
ZSCAN22
MRTO4
EMC1
SCGB1C2
SCGB1C1
ODF3
UNKL
ORMDL3
GSDMB
TIMM22
ZNF517
ZNF34
RPL8
COPS8
FZR1
KBTBD7
UBB
NUP214
NOP14
GRK4
KMT2D
SMN2
SMN1
GPBAR1
BTRC
CNOT1
C16orf91
PEMT
RHEBL1
MED23
B4GALNT3
CRTC2
KPNB1
ST3GAL2
POMZP3
TESK2
MMACHC
ZNF337
SCAF1
RRAS
SYMPK
FOXA3
H4C15
CHMP4B
CTDP1
RPS3
IPO11
DIMT1
MTERF4
BOD1
MRPL24
ZNF513
IST1
SNX17
EIF2B4
WASHC2C
PNKD
PHB
GSTA4
PSMD3
PEX3
ADAT2
TOB2